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Found 156 result(s)

Cancer GenomeAtlas Data Portal

Cancer Genome Atlas Data Portal

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The Cancer Genome Atlas (TCGA) Data Portal provides a platform for researchers to search, download, and analyze data sets generated by TCGA. It contains clinical information, genomic characterization data, and high level sequence analysis of the tumor genomes. The Data Coordinating Center (DCC) is the central provider of TCGA data. The DCC standardizes data formats and validates submitted data.

Morph·D·Base

MorphDBase

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Morph·D·Base has been developed to serve scientific research and education. It provides a platform for storing the detailed documentation of all material, methods, procedures, and concepts applied, together with the specific parameters, values, techniques, and instruments used during morphological data production. In other words, it's purpose is to provide a publicly available resource for recording and documenting morphological metadata. Moreover, it is also a repository for different types of media files that can be uploaded in order to serve as support and empirical substantiation of the results of morphological investigations. Our long-term perspective with Morph·D·Base is to provide an instrument that will enable a highly formalized and standardized way of generating morphological descriptions using a morphological ontology that will be based on the web ontology language (OWL - http://www.w3.org/TR/owl-features/). This, however, represents a project that is still in development.

MorphoSource

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MorphoSource is a data repository specialized for 3D representing physical objects used in research in education (e.g., from museum or laboratory collections). It allows researchers and museum collection staff to store and organize, share, and distribute their own 3d data. Furthermore any registered user can immediately search for and download 3d morphological data sets that have been made accessible through the consent of data authors.

GOBASE

The Organelle Genome Database

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<<<!!!<<< the repository is offline >>>!!!>>> GOBASE is a taxonomically broad organelle genome database that organizes and integrates diverse data related to mitochondria and chloroplasts. GOBASE is currently expanding to include information on representative bacteria that are thought to be specifically related to the bacterial ancestors of mitochondria and chloroplasts

Arca Dados

Arca Data

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Arca Data is Fiocruz's official repository for archiving, publishing, disseminating, preserving and sharing digital research data produced by the Fiocruz community or in partnership with other research institutes or bodies, with the aim of promoting new research, ensuring the reproducibility or replicability of existing research and promoting an Open and Citizen Science. Its objective is to stimulate the wide circulation of scientific knowledge, strengthening the institutional commitment to Open Science and free access to health information, in addition to providing transparency and fostering collaboration between researchers, educators, academics, managers and graduate students, to the advancement of knowledge and the creation of solutions that meet the demands of society.

UK Hydrographic Office

UKHO

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The UK Hydrographic Office (UKHO) is a world-leading centre for hydrography, specialising in marine geospatial data to support safe, secure and thriving oceans. UK Hydrographic Office Bathymetry Data Archive Centre (UKHO DAC) is the UK national repository for bathymetry data. It is provided by the UK Hydrographic Office (UKHO) as part of the wider Marine Environmental Data and Information Network (MEDIN) https://medin.org.uk/. The UKHO DAC holds bathymetry data assets from a wide range of sources – Government funded, commercial, environmental and defence. The ADMIRALTY Marine Data Portal https://www.gov.uk/guidance/inspire-portal-and-medin-bathymetry-data-archive-centre provides access to marine data sets held by the UK Hydrographic Office within the UK Exclusive Economic Zone (EEZ).

VecNet

Vector-Borne Disease Network

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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>

Natural Heritage Information Centre

Centre d'information sur le patrimoine naturel

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The Ontario Natural Heritage Information Centre (NHIC) compiles, maintains and provides information on rare, threatened and endangered species and spaces in Ontario. This information is stored in a central repository composed of computerized databases, map files and an information library, which are accessible for conservation applications, land use development planning, park management, etc. Ministry of Natural Resources, Ontario.

MassBank Europe

MassBank

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Database of mass spectra of known, unknown and provisionally identified substances. MassBank is the first public repository of mass spectral data for sharing them among scientific research community. MassBank data are useful for the chemical identification and structure elucidation of chemical compounds detected by mass spectrometry.

PATRIC

Pathosystems Resource Integration Center

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<<<!!!<<< This repository is no longer available. >>>!!!>>> PATRIC will go offline by mid-December2022. Here is what you need to know. As announced previously, PATRIC, the bacterial BRC, and IRD / ViPR, the viral BRCs, are being merged into the new Bacterial and Viral Bioinformatics Resource Center (BV-BRC). BV-BRC combines the data, tools, and technologies from these BRCs to provide an integrated resource for bacterial and viral genomics-based infectious disease research.

Repositorio de Datos de Investigación Universidad de Santiago de Chile

USACH Dataverse

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The USACH research data repository provides a platform for researchers affiliated to the University to share, manage and preserve research data. So that they are accessible and detectable, both for the internal and external community, bringing the knowledge generated closer to the population.

domino

domaine peptide interactions

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<<<!!!<<< This repository is no longer available. 2019-02-19 >>>!!!>>>

GLUES Geoportal

Global Assessment of Land Use Dynamics, Greenhouse Gas Emissions and Ecosystem Services : Geoportal

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<<<!!!<<< This repository is no longer maintained >>>!!!>>> This portal provides access to the GLUES Geodata Infrastructure (Glues GDI). The infrastructure is the common data and service platform for the international research program 'Sustainable Land Management'.

Propylaeum@heiDATA

Data publications of the Specialized Information Service Classics

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Additional to the the e-publishing offer for articles, books and journals, Propylaeum provides classical scholars with the opportunity to archive the respective research data permanently. These can be linked directly to online publications hosted on the Heidelberg publishing platforms. All research data – e.g. images, videos, audio files, tables, graphics etc. – receive a DOI (Digital Object Identifiyer). Thus, they can be cited, viewed and permanently linked to as distinct academic output.

OceanDataPortal

ODP

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<<<!!!<<< This repository is no longer available. >>>!!!>>> The programme "International Oceanographic Data and Information Exchange" (IODE) of the "Intergovernmental Oceanographic Commission" (IOC) of UNESCO was established in 1961. Its purpose is to enhance marine research, exploitation and development, by facilitating the exchange of oceanographic data and information between participating Member States, and by meeting the needs of users for data and information products.

ENCODE

Encyclopedia of DNA Elements

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The ENCODE Encyclopedia organizes the most salient analysis products into annotations, and provides tools to search and visualize them. The Encyclopedia has two levels of annotations: Integrative-level annotations integrate multiple types of experimental data and ground level annotations. Ground-level annotations are derived directly from the experimental data, typically produced by uniform processing pipelines.

datastore by Universität Münster

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datastore is the cross-domain research data repository of the University Münster (Germany). In datastore, scientific members of the University Münster can publish their research data following the FAIR principles, including the assignment of a DOI for each dataset as a persistent identifier.

CORA. Repositori de Dades de Recerca

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The CORA. Repositori de dades de Recerca is a repository of open, curated and FAIR data that covers all academic disciplines. CORA. Repositori de dades de Recerca is a shared service provided by participating Catalan institutions (Universities and CERCA Research Centers). The repository is managed by the CSUC and technical infrastructure is based on the Dataverse application, developed by international developers and users led by Harvard University (https://dataverse.org).

TheDataWeb

DataFerrett

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<<<!!!<<< This repository is no longer available. >>>!!!>>> Be advised that DataFerrett was decommissioned June 30, 2020; see https://www.census.gov/data/data-tools/dataferrett.html

<odesi>

Initiative ontarienne en matière de documentation des données, de service d'extraction et d'infrastructure

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<odesi> is a digital repository for social science data, including polling data. Data collections are: Statistics Canada, Canadian Gallup Polls, CORA - Canadian Opinion Research Archive, ICPSR - Interuniversity Consortium for Political and Social Research.

Australian Ocean Data Network Portal

AODN

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Australian Ocean Data Network (AODN) provides data collected by the Australian marine community. AODN's data is searchable via map interface and metadata catalogue. AODN is Australia's exhaustive repository for marine and climate data. AODN has merged with IMOS eMarine Information Infrastructure (eMII) Facility in May 2016. IMOS is a multi-institutional collaboration with a focus on open data access. It is ideally placed to manage the AODN on behalf of the Australian marine and climate community.

RCSB Protein Data Bank

RCSB PDB

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The Protein Data Bank (PDB) archive is the single worldwide repository of information about the 3D structures of large biological molecules, including proteins and nucleic acids. These are the molecules of life that are found in all organisms including bacteria, yeast, plants, flies, other animals, and humans. Understanding the shape of a molecule helps to understand how it works. This knowledge can be used to help deduce a structure's role in human health and disease, and in drug development. The structures in the archive range from tiny proteins and bits of DNA to complex molecular machines like the ribosome.

ICRISAT Dataverse

International Crops Research Institute for the Semi-Arid Tropics Dataverse Network

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ICRISAT performs crop improvement research, using conventional as well as methods derived from biotechnology, on the following crops: Chickpea, Pigeonpea, Groundnut, Pearl millet,Sorghum and Small millets. ICRISAT's data repository collects, preserves and facilitates access to the datasets produced by ICRISAT researchers to all users who are interested in. Data includes Phenotypic, Genotypic, Social Science, and Spatial data, Soil and Weather.

InGeoCloudS

Inspired GEOdata CLOUD Services

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<<<!!!<<< The repository is no longer available. Information about the project see https://www.pole-inside.fr/en/page/ingeoclouds or https://www.eurogeosurveys.org/projects/ingeoclouds/>>>!!!>>>

European Zebrafish Resource Center

EZRC

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The EZRC at KIT houses the largest experimental fish facility in Europe with a capacity of more than 300,000 fish. Zebrafish stocks are maintained mostly as frozen sperm. Frequently requested lines are also kept alive as well as a selection of wildtype strains. Several thousand mutations in protein coding genes generated by TILLING in the Stemple lab of the Sanger Centre, Hinxton, UK and lines generated by ENU mutagenesis by the Nüsslein-Volhard lab in addition to transgenic lines and mutants generated by KIT groups or brought in through collaborations. We also accept submissions on an individual basis and ship fish upon request to PIs in Europe and elsewhere. EZRC also provides screening services and technologies such as imaging and high-throughput sequencing. Key areas include automation of embryo handling and automated image acquisition and processing. Our platform also involves the development of novel microscopy techniques (e.g. SPIM, DSLM, robotic macroscope) to permit high-resolution, real-time imaging in 4D. By association with the ComPlat platform, we can support also chemical screens and offer libraries with up to 20,000 compounds in total for external users. As another service to the community the EZRC provides plasmids (cDNAs, transgenes, Talen, Crispr/cas9) maintained by the Helmholtz repository of Bioparts (HERBI) to the scientific community. In addition the fish facility keeps a range of medaka stocks, maintained by the Loosli group.