Repository details

PATRIC

⚠ Caution: This entry is annotated as "Offline: 2022-12". If you believe this is incorrect, please submit a change request.
Name of repository
PATRIC
Additional name(s)
  • Pathosystems Resource Integration Center
Repository URL
https://www.patricbrc.org/portal/portal/patric/Home
Subject(s)
Description
<<<!!!<<< This repository is no longer available. >>>!!!>>> PATRIC will go offline by mid-December2022. Here is what you need to know. As announced previously, PATRIC, the bacterial BRC, and IRD / ViPR, the viral BRCs, are being merged into the new Bacterial and Viral Bioinformatics Resource Center (BV-BRC). BV-BRC combines the data, tools, and technologies from these BRCs to provide an integrated resource for bacterial and viral genomics-based infectious disease research.
Contact(s)
  • administrative: help@patricbrc.org
Keyword(s)
Persistent identifier(s) of the repository
Repository type(s)
  • disciplinary
Mission statement for designated community
https://www.patricbrc.org/portal/portal/patric/Home
Research data repository language(s)
  • English
Data and/or service provider
  • dataProvider

Dates

Started
2009
Offline
2022-12

Institutions (3)

Institution name
Bioinformatics Resource Centers
Additional name(s)
  • BRCs
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
National Institutes of Health, National Institute of Allergy and Infectious Diseases
Additional name(s)
  • National Institute of Allergy and Infectious Diseases
  • NIH
  • NIAID
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Start date of responsibility
2009
Institution name
University of Chicago
Country
United States
Type(s) of responsibility
  • technical
Type of institution
non-profit
Start date of responsibility
2009

Policies (2)

Policy name
PATRIC Data Release Policy
Policy name
NIAID/Division of Microbiology and Infectious Diseases (DMID) Data Sharing and Release Guidelines

Database access

Type of access to research data repository
open

Database licenses (1)

Database license
other

Data access (1)

Type of access to data
open

Data licenses (2)

Data license
other
Data license
other

Data upload (2)

Type of data upload
restricted
Data upload restriction type(s)
  • registration
Type of data upload
restricted
Data upload restriction type(s)
  • feeRequired
Persistent identifier system(s)
  • none
Name of the repository software
  • unknown
Versioning
yes
Data citation guideline
http://enews.patricbrc.org/citing-patric/
Enhanced publication
yes

Application programming interfaces (1)

Type
FTP
Url
ftp://ftp.patricbrc.org/patric2/

Metadata standards (1)

Metadata standard
Genome Metadata

Alerting services (1)

Type of alerting service
RSS

Remarks

Remarks
Description: "The PATRIC website provides an entry point to integrated data and tools for bacterial infectious disease research. The website is organized by data types and analysis tools. Primary access is provided through the PATRIC main menu, available at the top of the home page." University of Chicago is one of four Bioinformatics Resource Centers awarded by NIAID to provide data, tools and services which can be accessed through publicly available sites.
Entry date
2015-09-21
Last update
2024-12-10
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Cite this re3data.org record:

re3data.org: PATRIC; editing status 2024-12-10; re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R35W56 last accessed: 2026-07-07