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Found 102 result(s)

INTREPID bioinformatics

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!!! >>> intrepidbio.com expired <<< !!!! Intrepid Bioinformatics serves as a community for genetic researchers and scientific programmers who need to achieve meaningful use of their genetic research data – but can’t spend tremendous amounts of time or money in the process. The Intrepid Bioinformatics system automates time consuming manual processes, shortens workflow, and eliminates the threat of lost data in a faster, cheaper, and better environment than existing solutions. The system also provides the functionality and community features needed to analyze the large volumes of Next Generation Sequencing and Single Nucleotide Polymorphism data, which is generated for a wide range of purposes from disease tracking and animal breeding to medical diagnosis and treatment.

Columbia University Academic Commons

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Academic Commons provides open, persistent access to the scholarship produced by researchers at Columbia University, Barnard College, Jewish Theological Seminary, Teachers College, and Union Theological Seminary. Academic Commons is a program of the Columbia University Libraries. Academic Commons accepts articles, dissertations, research data, presentations, working papers, videos, and more.

Biodiversity Exploratories Information System

BExIS

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BExIS is the online data repository and information system of the Biodiversity Exploratories Project (BE). The BE is a German network of biodiversity related working groups from areas such as vegetation and soil science, zoology and forestry. Up to three years after data acquisition, the data use is restricted to members of the BE. Thereafter, the data is usually public available (https://www.bexis.uni-jena.de/ddm/publicsearch/index).

ETH Zürich Research Collection

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The Research Collection is ETH Zurich's publication platform. It unites the functions of a university bibliography, an open access repository and a research data repository within one platform. Researchers who are affiliated with ETH Zurich, the Swiss Federal Institute of Technology, may deposit research data from all domains. They can publish data as a standalone publication, publish it as supplementary material for an article, dissertation or another text, share it with colleagues or a research group, or deposit it for archiving purposes. Research-data-specific features include flexible access rights settings, DOI registration and a DOI preview workflow, content previews for zip- and tar-containers, as well as download statistics and altmetrics for published data. All data uploaded to the Research Collection are also transferred to the ETH Data Archive, ETH Zurich’s long-term archive.

PMN

Plant Metabolic Network

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The Plant Metabolic Network (PMN) provides a broad network of plant metabolic pathway databases that contain curated information from the literature and computational analyses about the genes, enzymes, compounds, reactions, and pathways involved in primary and secondary metabolism in plants. The PMN currently houses one multi-species reference database called PlantCyc and 22 species/taxon-specific databases.

CU Scholar

University of Colorado Boulder's institutional repository

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CU Scholar is an open access institutional repository supporting the research and teaching mission of the University of Colorado Boulder. It is intended to serve as a platform for preserving the research activities of members of the CU Boulder community and for providing public access to that research. CU Scholar is maintained by the University Libraries.

International Mouse Strain Resource

IMSR

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The IMSR is a searchable online database of mouse strains, stocks, and mutant ES cell lines available worldwide, including inbred, mutant, and genetically engineered strains. The goal of the IMSR is to assist the international scientific community in locating and obtaining mouse resources for research. Note that the data content found in the IMSR is as supplied by strain repository holders. For each strain or cell line listed in the IMSR, users can obtain information about: Where that resource is available (Repository Site); What state(s) the resource is available as (e.g. live, cryopreserved embryo or germplasm, ES cells); Links to descriptive information about a strain or ES cell line; Links to mutant alleles carried by a strain or ES cell line; Links for ordering a strain or ES cell line from a Repository; Links for contacting the Repository to send a query

Reactome

a curated pathway database

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Reactome is a manually curated, peer-reviewed pathway database, annotated by expert biologists and cross-referenced to bioinformatics databases. Its aim is to share information in the visual representations of biological pathways in a computationally accessible format. Pathway annotations are authored by expert biologists, in collaboration with Reactome editorial staff and cross-referenced to many bioinformatics databases. These include NCBI Gene, Ensembl and UniProt databases, the UCSC and HapMap Genome Browsers, the KEGG Compound and ChEBI small molecule databases, PubMed, and Gene Ontology.

Woods Hole Open Access Server

WHOAS

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The Woods Hole Open Access Server, WHOAS, is an institutional repository that captures, stores, preserves, and redistributes the intellectual output of the Woods Hole scientific community in digital form. WHOAS is managed by the MBLWHOI Library as a service to the Woods Hole scientific community

SUNScholarData

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SUNScholarData is an institutional research data repository which can be used for the registration, archival storage, sharing and dissemination of research data produced or collected in relation to research conducted under the auspices of Stellenbosch University. The repository has a public interface which can be used for finding content. It also has private user accounts which can be used by Stellenbosch University users in order to upload, share or publish their research data. In addition to this Stellenbosch University researchers can also use SUNScholarData in order to collaborate with researchers from other institutions whilst working on their research projects. The repository creates a medium through which Stellenbosch University’s research data can be made findable and accessible. It also facilitates the interoperability and re-usability of the university’s research data.

CancerData.org

Sharing data for cancer research

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The CancerData site is an effort of the Medical Informatics and Knowledge Engineering team (MIKE for short) of Maastro Clinic, Maastricht, The Netherlands. Our activities in the field of medical image analysis and data modelling are visible in a number of projects we are running. CancerData is offering several datasets. They are grouped in collections and can be public or private. You can search for public datasets in the NBIA (National Biomedical Imaging Archive) image archives without logging in.

Ensembl Metazoa

e!EnsemblMetazoa

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Ensembl Metazoa is a genome-centric portal for metazoan species of scientific interest.

Movebank Data Repository

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This data repository allows users to publish animal tracking datasets that have been uploaded to Movebank (https://www.movebank.org/ ). Published datasets have gone through a submission and review process, and are typically associated with a written study published in an academic journal. All animal tracking data in this repository are available to the public.

Mouse Genome Informatics

MGI

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MGI is the international database resource for the laboratory mouse, providing integrated genetic, genomic, and biological data to facilitate the study of human health and disease. The projects contributing to this resource are: Mouse Genome Database (MGD) Project, Gene Expression Database (GXD) Project, Mouse Tumor Biology (MTB) Database Project, Gene Ontology (GO) Project at MGI, MouseMine Project, MouseCyc Project at MGI

Datenrechercheportal UFZ

Data Investigation Portal UFZ

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The data repository of the Helmholtz Centre for Environmental Research. The Data Investigation Portal (DRP) provides the opportunity to publicly access the administered data in the Data Management Portal and search them. The presentation is here limited to metadata and non-restricted information. DRP users can thus gain an overview of the data sets and, if necessary, contact the author to gain access to the data.

heiDATA

heiDATA Institutional Repository for Research Data of Heidelberg University

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heiDATA is Heidelberg University’s research data repository. It is managed by the Research Data Unit, a joint institution of the University Library and the Computing Centre. All researchers affiliated with Heidelberg University can use this service for archiving and publishing their data.

EnviDat

Environmental Data Portal

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EnviDat is the environmental data portal and repository developed by the Swiss Federal Research Institute WSL since 2013. The portal provides unified and managed access to environmental monitoring and research data. EnviDat is the official institutional data repository of WSL and the main tool for implementing the WSL Data Policy.

Cancer GenomeAtlas Data Portal

Cancer Genome Atlas Data Portal

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The Cancer Genome Atlas (TCGA) Data Portal provides a platform for researchers to search, download, and analyze data sets generated by TCGA. It contains clinical information, genomic characterization data, and high level sequence analysis of the tumor genomes. The Data Coordinating Center (DCC) is the central provider of TCGA data. The DCC standardizes data formats and validates submitted data.

Ensembl Plants

e!EnsemblPlants

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EnsemblPlants is a genome-centric portal for plant species. Ensembl Plants is developed in coordination with other plant genomics and bioinformatics groups via the EBI's role in the transPLANT consortium.

Brain Transcriptome Database

BrainTx

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The Brain Transcriptome Database (BrainTx) project aims to create an integrated platform to visualize and analyze our original transcriptome data and publicly accessible transcriptome data related to the genetics that underlie the development, function, and dysfunction stages and states of the brain.

Natural History Museum, Data Portal

Explore and download the Natural History Museum’s research and collections data

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The Museum is committed to open access and open science, and has launched the Data Portal to make its research and collections datasets available online. It allows anyone to explore, download and reuse the data for their own research. Our natural history collection is one of the most important in the world, documenting 4.5 billion years of life, the Earth and the solar system. Almost all animal, plant, mineral and fossil groups are represented. These datasets will increase exponentially. Under the Museum's ambitious digital collections programme we aim to have 20 million specimens digitised in the next five years.

iDog

Dog Genome SNP Database

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iDog, an integrated resource for domestic dog (Canis lupus familiaris) and wild canids, provides the worldwide dog research community a variety of data services. This includes Genes, Genomes, SNPs, Breed/Disease Traits, Gene Expressions, Single Cell, Dog-Human Homolog Diseases and Literatures. In addition, iDog provides Online tools for performing genomic data visualization and analyses.

DWB BioCASe Data Publication pipeline and RDF service

Bavarian Natural History Collections - occurrence data

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Our research focuses mainly on the past and present bio- and geodiversity and the evolution of animals and plants. The Information Technology Center of the Staatliche Naturwissenschaftliche Sammlungen Bayerns is the institutional repository for scientific data of the SNSB. Its major tasks focus on the management of bio- and geodiversity data using different kinds of information technological structures. The facility guarantees a sustainable curation, storage, archiving and provision of such data.

Ocean Observatories Initiative Data

Ocean Observatories Initiative Data Portal

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The Ocean Observatories Initiative (OOI) is a science-driven ocean observing network that delivers real-time data from more than 800 instruments to address critical science questions regarding the world’s ocean. OOI data are freely available online to anyone with an Internet connection.

Repository of the University of Life Sciences in Lublin

Repozytorium Uniwersytetu Przyrodniczego w Lublinie

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The purpose of the Repository of the University of Life Sciences in Lublin is to disseminate the academic achievements of the University' employees and to promote research conducted at the University. The repository contains resources from various fields of life sciences. Only the community of the University is allowed to upload new records.