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Found 31 result(s)
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The 1000 Genomes Project is an international collaboration to produce an extensive public catalog of human genetic variation, including SNPs and structural variants, and their haplotype contexts. This resource will support genome-wide association studies and other medical research studies.
The genomes of about 2500 unidentified people from about 25 populations around the world will be sequenced using next-generation sequencing technologies. The results of the study will be freely and publicly accessible to researchers worldwide.
The International Genome Sample Resource (IGSR) has been established at EMBL-EBI to continue supporting data generated by the 1000 Genomes Project, supplemented with new data and new analysis.
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<<<!!!<<< This repository is no longer available. >>>!!!>>>
In 2016, NSIDC partnered with the United States Antarctic Program - Data Center (USAP-DC) at Columbia University to consolidate NSF glaciology data into a central USAP Project Catalog and a Data Repository for research datasets derived from these projects. From 2016 to 2018, the AGDC data sets were transferred to USAP-DC. All AGDC data previously archived with NSIDC are now available via the USAP-DC https://www.re3data.org/repository/r3d100010660.
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The Mikulski Archive for Space Telescopes (MAST) is a NASA funded project to support and provide to the astronomical community a variety of astronomical data archives, with the primary focus on scientifically related data sets in the optical, ultraviolet, and near-infrared parts of the spectrum. MAST is located at the Space Telescope Science Institute (STScI).
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The Bavarian Archive for Speech Signals (BAS) is a public institution hosted by the University of Munich. This institution was founded with the aim of making corpora of current spoken German available to both the basic research and the speech technology communities via a maximally comprehensive digital speech-signal database. The speech material will be structured in a manner allowing flexible and precise access, with acoustic-phonetic and linguistic-phonetic evaluation forming an integral part of it.
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Brain Image Library (BIL) is an NIH-funded public resource serving the neuroscience community by providing a persistent centralized repository for brain microscopy data. Data scope of the BIL archive includes whole brain microscopy image datasets and their accompanying secondary data such as neuron morphologies, targeted microscope-enabled experiments including connectivity between cells and spatial transcriptomics, and other historical collections of value to the community. The BIL Analysis Ecosystem provides an integrated computational and visualization system to explore, visualize, and access BIL data without having to download it.
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The Center for Remote Sensing of Ice Sheets radar data repository containing data products from the Greenland Ice Sheet, the Antarctic Ice Sheet, sea ice, and land snow.
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ClinVar is a freely accessible, public archive of reports of the relationships among human variations and phenotypes, with supporting evidence. ClinVar thus facilitates access to and communication about the relationships asserted between human variation and observed health status, and the history of that interpretation. ClinVar processes submissions reporting variants found in patient samples, assertions made regarding their clinical significance, information about the submitter, and other supporting data. The alleles described in submissions are mapped to reference sequences, and reported according to the HGVS standard. ClinVar then presents the data for interactive users as well as those wishing to use ClinVar in daily workflows and other local applications. ClinVar works in collaboration with interested organizations to meet the needs of the medical genetics community as efficiently and effectively as possible
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The Copernicus Marine Environment Monitoring Service (CMEMS) provides regular and systematic reference information on the physical and biogeochemical state, variability and dynamics of the ocean and marine ecosystems for the global ocean and the European regional seas.
The observations and forecasts produced by the service support all marine applications, including:
Marine safety;
Marine resources;
Coastal and marine environment;
Weather, seasonal forecasting and climate.
For instance, the provision of data on currents, winds and sea ice help to improve ship routing services, offshore operations or search and rescue operations, thus contributing to marine safety.
The service also contributes to the protection and the sustainable management of living marine resources in particular for aquaculture, sustainable fisheries management or regional fishery organisations decision-making process.
Physical and marine biogeochemical components are useful for water quality monitoring and pollution control. Sea level rise is a key indicator of climate change and helps to assess coastal erosion. Sea surface temperature elevation has direct consequences on marine ecosystems and appearance of tropical cyclones. As a result of this, the service supports a wide range of coastal and marine environment applications.
Many of the data delivered by the service (e.g. temperature, salinity, sea level, currents, wind and sea ice) also play a crucial role in the domain of weather, climate and seasonal forecasting.
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The Coriolis Data Centre handles operational oceanography measurements made in situ, complementing the measurement of the ocean surface made using instruments aboard satellites.
This work is realised through the establishment of permanent networks with data collected by ships or autonomous systems that are either fixed or drifting.
This data can be used to construct a snapshot of water mass structure and current intensity.
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The Earth Orientation Centre is responsible for monitoring of long-term earth orientation parameters, publications for time dissemination and leap second announcements.
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The Global Hydrology Resource Center (GHRC) provides both historical and current Earth science data, information, and products from satellite, airborne, and surface-based instruments. GHRC acquires basic data streams and produces derived products from many instruments spread across a variety of instrument platforms.
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>>>!!!<<< 2019-01: Global Land Cover Facility goes offline see https://spatialreserves.wordpress.com/2019/01/07/global-land-cover-facility-goes-offline/ ; no more access to http://www.landcover.org >>>!!!<<< The Global Land Cover Facility (GLCF) provides earth science data and products to help everyone to better understand global environmental systems. In particular, the GLCF develops and distributes remotely sensed satellite data and products that explain land cover from the local to global scales.
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The open government portal is a collection of datasets and publications by government departments and agencies. The public can use and access this data freely to learn more about how government works, carry out research or build web apps. The portal functions as both a library for current publications and as an archive for old publications which have historic value.
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HYdrological cycle in the Mediterranean EXperiemnt. Considering the science and societal issues motivating HyMeX, the programme aims to : improve our understanding of the water cycle, with emphasis on extreme events, by monitoring and modelling the Mediterranean atmosphere-land-ocean coupled system, its variability from the event to the seasonal and interannual scales, and its characteristics over one decade (2010-2020) in the context of global change, assess the social and economic vulnerability to extreme events and adaptation capacity.The multidisciplinary research and the database developed within HyMeX should contribute to: improve observational and modelling systems, especially for coupled systems, better predict extreme events, simulate the long-term water-cycle more accurately, provide guidelines for adaptation measures, especially in the context of global change.
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The MPC is responsible for the designation of minor bodies in the solar system: minor planets; comets, in conjunction with the Central Bureau for Astronomical Telegrams (CBAT); and natural satellites (also in conjunction with CBAT). The MPC is also responsible for the efficient collection, computation, checking and dissemination of astrometric observations and orbits for minor planets and comets
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The Japanese Genotype-phenotype Archive (JGA) is a service for permanent archiving and sharing of all types of individual-level genetic and de-identified phenotypic data resulting from biomedical research projects. The JGA contains exclusive data collected from individuals whose consent agreements authorize data release only for specific research use or to bona fide researchers. Strict protocols govern how information is managed, stored and distributed by the JGA. Once processed, all data are encrypted. Users can contact the JGA team from here.
JGA services are provided in collaboration with National Bioscience Database Center (NBDC) of Japan Science and Technology Agency.
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The Maize Genetics and Genomics Database focuses on collecting data related to the crop plant and model organism Zea mays. The project's goals are to synthesize, display, and provide access to maize genomics and genetics data, prioritizing mutant and phenotype data and tools, structural and genetic map sets, and gene models. MaizeGDB also aims to make the Maize Newsletter available, and provide support services to the community of maize researchers.
MaizeGDB is working with the Schnable lab, the Panzea project, The Genome Reference Consortium, and iPlant Collaborative to create a plan for archiving, dessiminating, visualizing, and analyzing diversity data.
MMaizeGDB is short for Maize Genetics/Genomics Database. It is a USDA/ARS funded project to integrate the data found in MaizeDB and ZmDB into a single schema, develop an effective interface to access this data, and develop additional tools to make data analysis easier. Our goal in the long term is a true next-generation online maize database.aize genetics and genomics database.
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The National Cryosphere Desert Data Center (hereinafter referred to as NCDC) is supported by the Institute of environment and Engineering in the cold and dry areas of the Chinese Academy of Sciences, in cooperation with Xinjiang Institute of ecology and geography of the Chinese Academy of Sciences, Chengdu Institute of mountain land disaster and environment of the Ministry of water resources of the Chinese Academy of Sciences, Qinghai Salt Lake Research Institute of the Chinese Academy of Sciences and Qinghai Gao of the Chinese Academy of Sciences The Institute of protobiology and other units were jointly established. The supporting units of glacier permafrost desert data center have formed a scientific research and support system of seven research laboratories and three research systems, highlighting the research characteristics of glacier, permafrost, desert, atmosphere, water and soil, ecology, environment, resources, engineering and sustainable development in the dry areas of cold regions.
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<<<!!!<<< NCBI has retired the Probe Database >>>!!!>>>
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The NCBI Taxonomy database is a curated set of names and classifications for all of the organisms that are represented in GenBank. The EMBL and DDBJ databases, as well as GenBank, now use the NCBI Taxonomy as the standard classification for nucleotide sequences. Taxonomy Contains the names and phylogenetic lineages of more than 160,000 organisms that have molecular data in the NCBI databases. New taxa are added to the Taxonomy database as data are deposited for them. When new sequences are submitted to GenBank, the submission is checked for new organism names, which are then classified and added to the Taxonomy database.
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Paleoclimatology data are derived from natural sources such as tree rings, ice cores, corals, and ocean and lake sediments. These proxy climate data extend the archive of weather and climate information hundreds to millions of years. The data include geophysical or biological measurement time series and some reconstructed climate variables such as temperature and precipitation.
NCEI provides the paleoclimatology data and information scientists need to understand natural climate variability and future climate change. We also operate the World Data Center for Paleoclimatology, which archives and distributes data contributed by scientists around the world.
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<<<!!!<<< The demand for high-value environmental data and information has dramatically increased in recent years. To improve our ability to meet that demand, NOAA’s former three data centers—the National Climatic Data Center, the National Geophysical Data Center, and the National Oceanographic Data Center, which includes the National Coastal Data Development Center—have merged into the National Centers for Environmental Information (NCEI). >>>!!!>>>
The National Oceanographic Data Center includes the National Coastal Data Development Center (NCDDC) and the NOAA Central Library, which are integrated to provide access to the world's most comprehensive sources of marine environmental data and information. NODC maintains and updates a national ocean archive with environmental data acquired from domestic and foreign activities and produces products and research from these data which help monitor global environmental changes. These data include physical, biological and chemical measurements derived from in situ oceanographic observations, satellite remote sensing of the oceans, and ocean model simulations.
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<<<!!!<<< This repository is no longer available. >>>!!!>>>
PATRIC will go offline by mid-December2022. Here is what you need to know.
As announced previously, PATRIC, the bacterial BRC, and IRD / ViPR, the viral BRCs, are being merged into the new Bacterial and Viral Bioinformatics Resource Center (BV-BRC). BV-BRC combines the data, tools, and technologies from these BRCs to provide an integrated resource for bacterial and viral genomics-based infectious disease research.
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The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important species such as tomato, potato, tobacco, eggplant, pepper, and the ornamental Petunia hybrida.
SGN is part of the International Solanaceae Initiative (SOL), which has the long-term goal of creating a network of resources and information to address key questions in plant adaptation and diversification
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To understand the global surface energy budget is to understand climate. Because it is impractical to cover the earth with monitoring stations, the answer to global coverage lies in reliable satellite-based estimates. Efforts are underway at NASA and universities to develop algorithms to do this, but such projects are in their infancy. In concert with these ambitious efforts, accurate and precise ground-based measurements in differing climatic regions are essential to refine and verify the satellite-based estimates, as well as to support specialized research.
To fill this niche, the Surface Radiation Budget Network (SURFRAD) was established in 1993 through the support of NOAA's Office of Global Programs.
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- EOSC FAIR-IMPACT
- re3data COREF
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-04-27
