Repository details

MaizeGDB

Name of repository
MaizeGDB
Additional name(s)
  • Maize Genetics and Genomics Database
Repository URL
http://www.maizegdb.org/
Subject(s)
Description
The Maize Genetics and Genomics Database focuses on collecting data related to the crop plant and model organism Zea mays. The project's goals are to synthesize, display, and provide access to maize genomics and genetics data, prioritizing mutant and phenotype data and tools, structural and genetic map sets, and gene models. MaizeGDB also aims to make the Maize Newsletter available, and provide support services to the community of maize researchers. MaizeGDB is working with the Schnable lab, the Panzea project, The Genome Reference Consortium, and iPlant Collaborative to create a plan for archiving, dessiminating, visualizing, and analyzing diversity data. MMaizeGDB is short for Maize Genetics/Genomics Database. It is a USDA/ARS funded project to integrate the data found in MaizeDB and ZmDB into a single schema, develop an effective interface to access this data, and develop additional tools to make data analysis easier. Our goal in the long term is a true next-generation online maize database.aize genetics and genomics database.
Contact
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
  • RRID:nif-0000-03096
  • RRID:SCR_006600
  • OMICS_01655
Repository type(s)
  • disciplinary
  • institutional
Mission statement for designated community
http://www.maizegdb.org/docs/MaizeGDBPresentation.ppt
Research data repository language(s)
  • English
Data and/or service provider
  • service provider
Institution name
Iowa State University, Department of Agronomy
Contact(s)
  • agron@iastate.edu
Country
United States
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution name
National Corn Growers Association
Additional name(s)
  • NCGA
Contact(s)
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
National Science Foundation
Additional name(s)
  • NSF
Contact(s)
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution name
United States Department of Agriculture, Agricultural Research Services
Additional name(s)
  • USDA, ARS
Contact(s)
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit

Database access

Type of access to research data repository
open

Database licenses (2)

Database License
other
Database License
Public Domain

Data access (2)

Type of access to data
open
Type of access to data
embargoed

Data licenses (1)

DataLicense
Public Domain

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • other

Data upload license (1)

Data upload license name
Contribute data
Persistent identifier system(s)
  • none
Name of the repository software
  • MySQL
Versioning
yes
Data citation guideline
http://maizegdb.org/cite
Enhanced Publication
yes
Quality management
yes

Application programming interfaces (2)

API type
FTP
API type
other

Metadata standards (1)

Metadata standard name
Repository-Developed Metadata Schemas
Metadata standard scheme
DCC

Alerting services (1)

Type of alerting service
RSS

Remarks

Entry date
2014-06-25
Last update
2019-07-10
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Cite this re3data.org record:

re3data.org: MaizeGDB; editing status 2019-07-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3V32B last accessed: 2023-06-03