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Found 34 result(s)

Protist EST Program Database

PEP Database

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<<<!!!<<< The PEP database (TBestDB)--Defunct as of 2017-04 >>>!!!>>> https://megasun.bch.umontreal.ca/pepdb/pepdb.html

Natural Resources Canada Earth Sciences Data

Ressources naturelles Canada Données Sciences de la Terre

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Natural Resources Canada (NRCan) seeks to enhance the responsible development and use of Canada’s natural resources and the competitiveness of Canada’s natural resources products. We are an established leader in science and technology in the fields of energy, forests, and minerals and metals and use our expertise in earth sciences to build and maintain an up-to-date knowledge base of our landmass.

Canada's Michael Smith Genome Sciences Centre

GSC

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We are a leading international centre for genomics and bioinformatics research. Our mandate is to advance knowledge about cancer and other diseases, to improve human health through disease prevention, diagnosis and therapeutic approaches, and to realize the social and economic benefits of genomics research.

Avibase

the world bird database

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Avibase is an extensive database information system about all birds of the world, containing over 60 million records about 10,000 species and 22,000 subspecies of birds, including distribution information, taxonomy, synonyms in several languages and more. This site is managed by Denis Lepage and hosted by Bird Studies Canada, the Canadian copartner of Birdlife International. Avibase has been a work in progress since 1992 and I am now pleased to offer it as a service to the bird-watching and scientific community.

International Mouse Phenotyping Consortium

IMPC

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The IMPC is a confederation of international mouse phenotyping projects working towards the agreed goals of the consortium: To undertake the phenotyping of 20,000 mouse mutants over a ten year period, providing the first functional annotation of a mammalian genome. Maintain and expand a world-wide consortium of institutions with capacity and expertise to produce germ line transmission of targeted knockout mutations in embryonic stem cells for 20,000 known and predicted mouse genes. Test each mutant mouse line through a broad based primary phenotyping pipeline in all the major adult organ systems and most areas of major human disease. Through this activity and employing data annotation tools, systematically aim to discover and ascribe biological function to each gene, driving new ideas and underpinning future research into biological systems; Maintain and expand collaborative “networks” with specialist phenotyping consortia or laboratories, providing standardized secondary level phenotyping that enriches the primary dataset, and end-user, project specific tertiary level phenotyping that adds value to the mammalian gene functional annotation and fosters hypothesis driven research; and Provide a centralized data centre and portal for free, unrestricted access to primary and secondary data by the scientific community, promoting sharing of data, genotype-phenotype annotation, standard operating protocols, and the development of open source data analysis tools. Members of the IMPC may include research centers, funding organizations and corporations.

Brain-CODE

Brain-Centre for Ontario Data Exploration

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Brain-CODE is a large-scale informatics platform that manages the acquisition and storage of multidimensional data collected from participants with a variety of brain disorders.

cisRED

Databases of genome-wide regulatory module and element predictions

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

Xenbase

Xenopus Genomics Database

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Xenbase's mission is to provide the international research community with a comprehensive, integrated and easy to use web based resource that gives access the diverse and rich genomic, expression and functional data available from Xenopus research. Xenbase also provides a critical data sharing infrastructure for many other NIH-funded projects, and is a focal point for the Xenopus community. In addition to our primary goal of supporting Xenopus researchers, Xenbase enhances the availability and visibility of Xenopus data to the broader biomedical research community.

Fungal Mitochondrial Genome Project

FMGP

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The goals of FMGP are to: (i) sequence complete mitochondrial genomes from all major fungal lineages, (ii) infer a robust fungal phylogeny, (iii) define the origin of the fungi, their protistan ancestors, and their specific phylogenetic link to the animals, (iv) investigate mitochondrial gene expression, introns, RNAse P RNA structures, mobile elements.

Avian Knowledge Network

AKN

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The Avian Knowledge Network (AKN) is an international network of governmental and non-governmental institutions and individuals linking avian conservation, monitoring and science through efficient data management and coordinated development of useful solutions using best-science practices based on the data.

Ontario Reptile and Amphibian Atlas

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Reptiles and amphibians are collectively known as herpetofauna and are a unique part of Ontario’s biodiversity. An earlier atlas, called the Ontario Herpetofaunal Summary Atlas, provided extensive information about where many of the province’s reptiles and amphibians occurred. The Atlas is transitioning into a new era, with Ontario Nature wrapping-up the data collection phase of this project as of December 1, 2019. Now that we have discontinued our app and online form, we encourage you to continue submitting any future observations through the ‘Herps of Ontario’ project (https://www.inaturalist.org/projects/herps-of-ontario) on iNaturalist or directly to the Natural Heritage Information Centre (nhicrequests@ontario.ca) for species at risk. To learn more about the transition, read our blog (https://ontarionature.org/ontario-reptile-and-amphibian-atlas-changes/)

Small Molecule Pathway Database

formerly: PathBank

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The Small Molecule Pathway Database (SMPDB) contains small molecule pathways found in humans, which are presented visually. All SMPDB pathways include information on the relevant organs, subcellular compartments, protein cofactors, protein locations, metabolite locations, chemical structures and protein quaternary structures. Accompanying data includes detailed descriptions and references, providing an overview of the pathway, condition or processes depicted in each diagram.

Saskatchewan Conservation Data Centre

SKCDC

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The SKCDC collects information on wild species and relies on submissions of observations from across the province of Saskatchewan. This data is used to inform biodiversity conservation efforts. The Saskatchewan Conservation Data Centre manages observation records for plants, animals, insects and special features of biodiversity.

Animal Genome Size Database

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Welcome to the Animal Genome Size Database, Release 2.0, a comprehensive catalogue of animal genome size data.

InnateDB

A Knowlede Resource for Innate Immunity Interactions & Pathways

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InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. The database captures an improved coverage of the innate immunity interactome by integrating known interactions and pathways from major public databases together with manually-curated data into a centralised resource. The database can be mined as a knowledgebase or used with our integrated bioinformatics and visualization tools for the systems level analysis of the innate immune response.

Canadensys repository

Database of Vascular Plants of Canada

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Biological collections are replete with taxonomic, geographic, temporal, numerical, and historical information. This information is crucial for understanding and properly managing biodiversity and ecosystems, but is often difficult to access. Canadensys, operated from the Université de Montréal Biodiversity Centre, is a Canada-wide effort to unlock the biodiversity information held in biological collections.

BACTIBASE

a database dedicated to bacteriocins

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BACTIBASE contains calculated or predicted physicochemical properties of bacteriocins produced by both Gram-positive and Gram-negative bacteria. The information in this database is very easy to extract and allows rapid prediction of relationships structure/function and target organisms of these peptides and therefore better exploitation of their biological activity in both the medical and food sectors.

Ocean Networks Canada

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Ocean Networks Canada maintains several observatories installed in three different regions in the world's oceans. All three observatories are cabled systems that can provide power and high bandwidth communiction paths to sensors in the ocean. The infrastructure supports near real-time observations from multiple instruments and locations distributed across the Arctic, NEPTUNE and VENUS observatory networks. These observatories collect data on physical, chemical, biological, and geological aspects of the ocean over long time periods, supporting research on complex Earth processes in ways not previously possible.

CyberCell Database

CCDB

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<<<!!!<<<This repository is no longer available>>>!!!>>>

Ocean Tracking Network

OTN

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Ocean Tracking Network (OTN) deploys Canadian, state of the art acoustic receivers and oceanographic monitoring equipment in key ocean locations. These are being used to document the movements and survival of marine animals carrying acoustic tags and to document how both are influenced by oceanographic conditions.

Canadian Wildland Fire Information System

Système canadien d'information sur les feux de végétation

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The Large Fire Database (LFDB) is a compilation of forest fire data from all Canadian agencies, including provinces, territories, and Parks Canada. The data set includes only fires greater than 200 hectares in final size; these represent only a few percent of all fires but account for most of the area burned (usually more than 97%). Therefore, the LFDB can be used for spatial and temporal analyses of landscape-scale fire impacts. For information on smaller fires (up to 200 ha in final size), please contact individual fire agencies. Links to other agencies can be found through the Canadian Interagency Forest Fire Centre (CIFFC).

Canada's National Forest Inventory

Inventaire forestier national du Canada

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The National Forest Inventory (NFI) is a collaborative effort involving federal, provincial and territorial government agencies. They monitor a network of twenty thousand sampling points across Canada on an ongoing basis to provide information on the state of Canada's forests and a continuous record of forest change. They provide data and products to forest science researchers, forest policy decision-makers and interested stakeholders.

University of Waterloo Dataverse

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The University of Waterloo Dataverse is a data repository for research outputs of our faculty, students, and staff. Files are held in a secure environment on Canadian servers. Researchers can choose to make content available to the public, to specific individuals, or to keep it private.

Open Hamilton

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Open data for the City of Hamilton. Open Hamilton is designed to enable the community to better explore, visualize and download City data.

Natural Heritage Information Centre

Centre d'information sur le patrimoine naturel

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The Ontario Natural Heritage Information Centre (NHIC) compiles, maintains and provides information on rare, threatened and endangered species and spaces in Ontario. This information is stored in a central repository composed of computerized databases, map files and an information library, which are accessible for conservation applications, land use development planning, park management, etc. Ministry of Natural Resources, Ontario.