Repository details
cisRED
Name of repository
cisRED
Additional name(s)
- Databases of genome-wide regulatory module and element predictions
- cis - Regulatory element database
Repository URL
Subject(s)
Description
<<<!!!<<< This repository is no longer available. >>>!!!>>>
Contact(s)
- administrative: cisred@bcgsc.ca
Persistent identifier(s) of the repository
- RRID:SCR_002098
- RRID:nif-0000-02665
- other:OMICS_01857
- FAIRsharing:10.25504/FAIRsharing.rwd4wq
Repository type(s)
- disciplinary
Research data repository language(s)
- English
Data and/or service provider
- dataProvider
Institutions (4)
Additional name(s)
- BCGSC
Country
Type(s) of responsibility
- general
- technical
Type of institution
non-profit
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- MSFHR
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Policies (1)
Policy Name
Database access
Type of access to research data repository
open
Data access (1)
Type of access to data
open
Data licenses (2)
Data upload (1)
Type of data upload
closed
Persistent identifier system(s)
- none
Name of the repository software
- MySQL
Data citation guideline
Remarks
Remarks
Description: "The cisRED database holds conserved sequence motifs identified by genome scale motif discovery, similarity, clustering, co-occurrence and coexpression calculations. Sequence inputs include low-coverage genome sequence data and ENCODE data. A Nucleic Acids Research article describes the system architecture"
Entry date
2014-02-20
Last update
2024-12-12
Cite this re3data.org record:
re3data.org: cisRED; editing status 2024-12-12; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3XK69 last accessed: 2025-04-25- Current projects
- EOSC FAIR-IMPACT
-
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.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-04-25
