Repository details
cisRED
Name of repository
cisRED
Additional name(s)
- Databases of genome-wide regulatory module and element predictions
- cis - Regulatory element database
Repository URL
Subject(s)
Description
<<<!!!<<< This repository is no longer available. >>>!!!>>>
Contact
- cisred@bcgsc.ca
Content type(s)
Persistent identifier(s) of the repository
- RRID:SCR_002098
- RRID:nif-0000-02665
- OMICS_01857
- FAIRsharing_doi:10.25504/FAIRsharing.rwd4wq
Repository type(s)
- disciplinary
Research data repository language(s)
- English
Data and/or service provider
- data provider
Additional name(s)
- BCGSC
Contact(s)
- cisred@bcgsc.ca
Country
Type(s) of responsibility
- general
- technical
Type of institution
non-profit
Institution name
Contact(s)
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Institution name
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Institution name
Additional name(s)
- MSFHR
Contact(s)
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Policies (1)
Policy Name
Database access
Type of access to research data repository
open
Data access (1)
Type of access to data
open
Data licenses (2)
Data upload (1)
Type of data upload
closed
Persistent identifier system(s)
- none
Name of the repository software
- MySQL
Data citation guideline
Enhanced Publication
unknown
Quality management
unknown
Remarks
Remarks
Description: "The cisRED database holds conserved sequence motifs identified by genome scale motif discovery, similarity, clustering, co-occurrence and coexpression calculations. Sequence inputs include low-coverage genome sequence data and ENCODE data. A Nucleic Acids Research article describes the system architecture"
Entry date
2014-02-20
Last update
2023-11-21
Cite this re3data.org record:
re3data.org: cisRED; editing status 2023-11-21; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3XK69 last accessed: 2024-10-12- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
-
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Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-10-12
