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Found 25 result(s)

The USGS Land Cover Institute

LCI

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The USGS currently houses the institute at the Center for Earth Resources Observation and Science (EROS) in Sioux Falls, South Dakota. The LCI will address land cover topics from local to global scales, and in both domestic and international settings. The USGS through the Land Cover Institute serves as a facilitator for land cover and land use science, applications, and production functions. The institute assists in the availability and technical support of land cover data sets through increasing public and scientific awareness of the importance of land cover science. LCI continues, after the reorganization of the World Data Centers in 2009, serving as the World Data Center (WDC) for land cover data for access to, or information about, land cover data of the world

GHRC

Global Hydrology Resource Center

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The Global Hydrology Resource Center (GHRC) provides both historical and current Earth science data, information, and products from satellite, airborne, and surface-based instruments. GHRC acquires basic data streams and produces derived products from many instruments spread across a variety of instrument platforms.

Archives of programs and data for physics

Archives for physics

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>>>!!!<<< 2018-01-18: no data nor programs can be found >>>!!!<<< These archives contain public domain programs for calculations in physics and other programs that we suppose about will help during work with computer. Physical constants and experimental or theoretical data as cross sections, rate constants, swarm parameters, etc., that are necessary for physical calculations are stored here, too. Programs are mainly dedicated to computers compatible with PC IBM. If programs do not use graphic units it is possible to use them on other computers, too. It is necessary to reprogram the graphic parts of programs in the other cases.

Codex

A comprehensive and functional compendium of Next Generation Sequencing experiments.

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CODEX is a database of NGS mouse and human experiments. Although, the main focus of CODEX is Haematopoiesis and Embryonic systems, the database includes a large variety of cell types. In addition to the publically available data, CODEX also includes a private site hosting non-published data. CODEX provides access to processed and curated NGS experiments. To use CODEX: (i) select a specialized repository (HAEMCODE or ESCODE) or choose the whole compendium (CODEX), then (ii) filter by organism and (iii) choose how to explore the database.

Spec Patterns

Specification Patterns

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Specification Patterns is an online repository for information about property specification for finite-state verification. The intent of this repository is to collect patterns that occur commonly in the specification of concurrent and reactive systems.

Upper Ocean Processes Group

UOP

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The primary focus of the Upper Ocean Processes Group is the study of physical processes in the upper ocean and at the air-sea interface using moored surface buoys equipped with meteorological and oceanographic sensors. UOP Project Map The Upper Ocean Processes Group provides technical support to upper ocean and air-sea interface science programs. Deep-ocean and shallow-water moored surface buoy arrays are designed, fabricated, instrumented, tested, and deployed at sea for periods of up to one year

The Cell Image Library

The Cell

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This library is a public and easily accessible resource database of images, videos, and animations of cells, capturing a wide diversity of organisms, cell types, and cellular processes. The Cell Image Library has been merged with "Cell Centered Database" in 2017. The purpose of the database is to advance research on cellular activity, with the ultimate goal of improving human health.

Japanese Genotype-phenotype Archive

JGA

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The Japanese Genotype-phenotype Archive (JGA) is a service for permanent archiving and sharing of all types of individual-level genetic and de-identified phenotypic data resulting from biomedical research projects. The JGA contains exclusive data collected from individuals whose consent agreements authorize data release only for specific research use or to bona fide researchers. Strict protocols govern how information is managed, stored and distributed by the JGA. Once processed, all data are encrypted. Users can contact the JGA team from here. JGA services are provided in collaboration with National Bioscience Database Center (NBDC) of Japan Science and Technology Agency.

NCBI Probe

Probe

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<<<!!!<<< NCBI has retired the Probe Database >>>!!!>>>

Fungal Genetics Stock Center

FGSC

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The Fungal Genetics Stock Center has preserved and distributed strains of genetically characterized fungi since 1960. The collection includes over 20,000 accessioned strains of classical and genetically engineered mutants of key model, human, and plant pathogenic fungi. These materials are distributed as living stocks to researchers around the world.

USGODAE Argo GDAC Data Browser

US Global Ocean Data Assimilation Experiment Argo Global Data Assembly Center Data Browser

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!!! <<< the repository is offline, please use: https://www.re3data.org/repository/r3d100011650 >>> !!! The USGODAE Project consists of United States academic, government and military researchers working to improve assimilative ocean modeling as part of the International GODAE Project. GODAE hopes to develop a global system of observations, communications, modeling and assimilation, that will deliver regular, comprehensive information on the state of the oceans, in a way that will promote and engender wide utility and availability of this resource for maximum benefit to the community. The USGODAE Argo GDAC is currently operational, serving daily data from the following national DACs: Australia (CSIRO), Canada (MEDS), China (2: CSIO and NMDIS), France (Coriolis), India (INCOIS), Japan (JMA), Korea (2: KMA and Kordi), UK (BODC), and US (AOML).

GUDMAP

GenitoUrinary Development Molecular Anatomy Project

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The GenitoUrinary Development Molecular Anatomy Project (GUDMAP) is a consortium of laboratories working to provide the scientific and medical community with tools to facilitate research. The key components are: (1) a molecular atlas of gene expression for the developing organs of the GenitoUrinary (GU) tract; (2) a high resolution molecular anatomy that highlights development of the GU system; (3) mouse strains to facilitate developmental and functional studies within the GU system; (4) tutorials describing GU organogenesis; and (5) rapid access to primary data via the GUDMAP database.

OpenTopography

A Portal to High-Resolution Topography Data and Tools

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OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources. The OpenTopography Facility is based at the San Diego Supercomputer Center at the University of California, San Diego and is operated in collaboration with colleagues in the School of Earth and Space Exploration at Arizona State University and Earthscope Consortium. Core operational support for OpenTopography comes from the National Science Foundation Earth Sciences.

Agency for Healthcare Research and Quality, Data & Surveys

AHRQ data & surveys

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A collection of data at Agency for Healthcare Research and Quality (AHRQ) supporting research that helps people make more informed decisions and improves the quality of health care services. The portal contains U.S.Health Information Knowledgebase (USHIK) and Systematic Review Data Repository (SRDR) and other sources concerning cost, quality, accesibility and evaluation of healthcare and medical insurance.

Immune Epitope Database

IEDB

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IEDB offers easy searching of experimental data characterizing antibody and T cell epitopes studied in humans, non-human primates, and other animal species. Epitopes involved in infectious disease, allergy, autoimmunity, and transplant are included. The IEDB also hosts tools to assist in the prediction and analysis of B cell and T cell epitopes.

Coriolis

Operational Oceanography

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The Coriolis Data Centre handles operational oceanography measurements made in situ, complementing the measurement of the ocean surface made using instruments aboard satellites. This work is realised through the establishment of permanent networks with data collected by ships or autonomous systems that are either fixed or drifting. This data can be used to construct a snapshot of water mass structure and current intensity.

NDAR

National Database for Autism Research

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<<<!!!<<< NDAR is a part of the National Institute of Mental Health Data Archive (NDA) https://www.re3data.org/repository/r3d100012653 >>>!!!>>>

UCSD Metabolomics Workbench

Metabolomics Workbench

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With the creation of the Metabolomics Data Repository managed by Data Repository and Coordination Center (DRCC), the NIH acknowledges the importance of data sharing for metabolomics. Metabolomics represents the systematic study of low molecular weight molecules found in a biological sample, providing a "snapshot" of the current and actual state of the cell or organism at a specific point in time. Thus, the metabolome represents the functional activity of biological systems. As with other ‘omics’, metabolites are conserved across animals, plants and microbial species, facilitating the extrapolation of research findings in laboratory animals to humans. Common technologies for measuring the metabolome include mass spectrometry (MS) and nuclear magnetic resonance spectroscopy (NMR), which can measure hundreds to thousands of unique chemical entities. Data sharing in metabolomics will include primary raw data and the biological and analytical meta-data necessary to interpret these data. Through cooperation between investigators, metabolomics laboratories and data coordinating centers, these data sets should provide a rich resource for the research community to enhance preclinical, clinical and translational research.

OFA Records

Orthopedic Foundation for Animals

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The OFA databases are core to the organization’s objective of establishing control programs to lower the incidence of inherited disease. Responsible breeders have an inherent responsibility to breed healthy dogs. The OFA databases serve all breeds of dogs and cats, and provide breeders a means to respond to the challenge of improving the genetic health of their breed through better breeding practices. The testing methodology and the criteria for evaluating the test results for each database were independently established by veterinary scientists from their respective specialty areas, and the standards used are generally accepted throughout the world.

miRBase

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The miRBase database is a searchable database of published miRNA sequences and annotation. Each entry in the miRBase Sequence database represents a predicted hairpin portion of a miRNA transcript (termed mir in the database), with information on the location and sequence of the mature miRNA sequence (termed miR). Both hairpin and mature sequences are available for searching and browsing, and entries can also be retrieved by name, keyword, references and annotation. All sequence and annotation data are also available for download. The miRBase Registry provides miRNA gene hunters with unique names for novel miRNA genes prior to publication of results.

Goddard Earth Sciences Data and Information Services Center

GES DISC

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One of twelve NASA Science Mission Directorate (SMD) Data Centers that provide Earth science data, information, and services to research scientists, applications scientists, applications users, and students. The GES DISC is the home (archive) of NASA Precipitation and Hydrology, as well as Atmospheric Composition and Dynamics remote sensing data and information. The DISC also houses the Modern Era Retrospective-Analysis for Research and Applications (MERRA) data assimilation datasets (generated by GSFC’s Global Modeling and Assimilation Office), and the North American Land Data Assimilation System (NLDAS) and Global Land Data Assimilation System (GLDAS) data products (both generated by GSFC's Hydrological Sciences Branch).

Rolling Deck to Repository

R2R

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The Rolling Deck to Repository (R2R) Program provides a comprehensive shore-side data management program for a suite of routine underway geophysical, water column, and atmospheric sensor data collected on vessels of the academic research fleet. R2R also ensures data are submitted to the NOAA National Centers for Environmental Information for long-term preservation.

eFish

Genomic Database Repository

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The project aims to examine and index the genomic diversity through the generation of complete mitochondrial and nuclear genome sequences of sharks and rays of the Pacific Rim. There is a huge diversity of elasmobranch fishes in this region, but many species are under threat because of poor management and conservation measures in many countries. It is absolutely critical that species’ identities are correct for conservation and fisheries management purposes. This project will provide this clarity of identity for both charismatic and commercially important species through the inclusion of ‘genetypes’ (ie., BioVouchers) and the application of genetic tools that utilize whole mitochondrial and nuclear genome sequences.

National Weather Service, Fairbanks, Alaska Region

NWS, Fairbanks AK

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The National Weather Service, Fairbanks provides weather data relating to and observed in the Fairbanks, AK area. Data includes current, past, and future weather. Databases are organized primarily by the type of data (e.g. weather data, climate data, hydrology, warning/hazard alerts) and then are searchable by research location.

National Data Archive on Child Abuse and Neglect

NDACAN

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The National Data Archive on Child Abuse and Neglect (NDACAN) promotes scholarly exchange among researchers in the child maltreatment field. NDACAN acquires microdata from leading researchers and national data collection efforts and makes these datasets available to the research community for secondary analysis.