Repository details
Codex
Name of repository
Codex
Additional name(s)
- A comprehensive and functional compendium of Next Generation Sequencing experiments.
Repository URL
Subject(s)
Description
CODEX is a database of NGS mouse and human experiments. Although, the main focus of CODEX is Haematopoiesis and Embryonic systems, the database includes a large variety of cell types. In addition to the publically available data, CODEX also includes a private site hosting non-published data. CODEX provides access to processed and curated NGS experiments. To use CODEX: (i) select a specialized repository (HAEMCODE or ESCODE) or choose the whole compendium (CODEX), then (ii) filter by organism and (iii) choose how to explore the database.
Keyword(s)
Repository size
1.734 Public experiments; 145 Private experiments ; 292 Unique factors; 147 Unique cell types
Repository type(s)
- disciplinary
Mission statement for designated community
Research data repository language(s)
- English
Data and/or service provider
- serviceProvider
Institutions (6)
Additional name(s)
- formerly: Leukaemia & Lymphoma Research
- formerly: bloodwise
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- Haematopoietic Stem Cell Lab - Bertie Gottgens
- Gottgens lab
- HSCL - Bertie Gottgens
Country
Type(s) of responsibility
- general
- technical
Type of institution
non-profit
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- BBSRC
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- MRC
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Database access
Type of access to research data repository
open
Data access (2)
Type of access to data
open
Type of access to data
closed
Data licenses (1)
DataLicense
Data upload (1)
Type of data upload
restricted
Data upload restriction type(s)
- feeRequired
Name of the repository software
- unknown
Data citation guideline
Quality management
yes
Remarks
Entry date
2017-03-31
Last update
2024-12-10
Cite this re3data.org record:
re3data.org: Codex; editing status 2024-12-10; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3TH3J last accessed: 2025-04-29- Current projects
- EOSC FAIR-IMPACT
-
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has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
-
Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-04-29
