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Found 162 result(s)

Codex

A comprehensive and functional compendium of Next Generation Sequencing experiments.

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<<<!!!<<<This repository is no longer available>>>!!!>>>

DataON Repository

previous name: KORD

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DataON is Korea's National Research Data Platform. It provides integrated search of metadata for KISTI's research data and domestic and international research data and links to raw data. DataON allows users (researchers, policy makers, etc.) to perform the following tasks: Easily search for various types of research data in all scientific fields. By registering research results, research data can be posted and cited. Build a community among researchers and enable collaborative research. It provides a data analysis environment that allows one-stop analysis of discovered research data.

Nuclear Receptor Signaling Atlas

NURSA Hub

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>>> !!! the repository is offline !!! <<< More information see: https://dknet.org/about/NURSA_Archive All NURSA-biocurated transcriptomic datasets have been preserved for data mining in SPP through an enhanced and expanded version of Transcriptomine named Ominer. To access these datasets, dkNET provides users with the information of 527 transcriptomic datasets that contain data related to nuclear receptors and nuclear receptor coregulators in the NURSA Datasets table view and redirects users to the current SPP dataset page. Once users find the specific dataset of research interest, users can download the dataset by clicking DOI and then clicking the Download Dataset button at the Signaling Pathways Project webpage. See https://www.re3data.org/repository/r3d100013650

Avian Knowledge Network

AKN

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The Avian Knowledge Network (AKN) is an international network of governmental and non-governmental institutions and individuals linking avian conservation, monitoring and science through efficient data management and coordinated development of useful solutions using best-science practices based on the data.

West of Scotland Twenty-07 Study

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The Twenty-07 Study was set up in 1986 in order to investigate the reasons for differences in health by socio-economic circumstances, gender, area of residence, age, ethnic group, and family type. 4510 people are being followed for 20 years. The initial wave of data collection took place in 1987/8, when respondents were aged 15, 35 and 55. The final wave of data collection took place in 2007/08 when respondents were aged 35, 55 and 75. In this way the Twenty-07 Study provides us with unique opportunities to investigate both the changes in people's lives over 20 years and how they affect their health, and the differences in people's experiences at the same ages 20 years apart, and how these have different effects on their health.

International HapMap Project

国际人类基因组单体型图计划

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<<<!!!<<< OFFLINE >>>!!!>>> A recent computer security audit has revealed security flaws in the legacy HapMap site that require NCBI to take it down immediately. We regret the inconvenience, but we are required to do this. That said, NCBI was planning to decommission this site in the near future anyway (although not quite so suddenly), as the 1,000 genomes (1KG) project has established itself as a research standard for population genetics and genomics. NCBI has observed a decline in usage of the HapMap dataset and website with its available resources over the past five years and it has come to the end of its useful life. The International HapMap Project is a multi-country effort to identify and catalog genetic similarities and differences in human beings. Using the information in the HapMap, researchers will be able to find genes that affect health, disease, and individual responses to medications and environmental factors. The Project is a collaboration among scientists and funding agencies from Japan, the United Kingdom, Canada, China, Nigeria, and the United States. All of the information generated by the Project will be released into the public domain. The goal of the International HapMap Project is to compare the genetic sequences of different individuals to identify chromosomal regions where genetic variants are shared. By making this information freely available, the Project will help biomedical researchers find genes involved in disease and responses to therapeutic drugs. In the initial phase of the Project, genetic data are being gathered from four populations with African, Asian, and European ancestry. Ongoing interactions with members of these populations are addressing potential ethical issues and providing valuable experience in conducting research with identified populations. Public and private organizations in six countries are participating in the International HapMap Project. Data generated by the Project can be downloaded with minimal constraints. The Project officially started with a meeting in October 2002 (https://www.genome.gov/10005336/) and is expected to take about three years.

Critical Zone Observatories data

CZO data

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The NSF-supported Program serves the international scientific community through research, infrastructure, data, and models. We focus on how components of the Critical Zone interact, shape Earth's surface, and support life. ARCHIVED CONTENT: In December 2020, the CZO program was succeeded by the Critical Zone Collaborative Network (CZ Net) https://criticalzone.org/

GeneWeaver.org

The Ontological Discovery Environment

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GeneWeaver combines cross-species data and gene entity integration, scalable hierarchical analysis of user data with a community-built and curated data archive of gene sets and gene networks, and tools for data driven comparison of user-defined biological, behavioral and disease concepts. Gene Weaver allows users to integrate gene sets across species, tissue and experimental platform. It differs from conventional gene set over-representation analysis tools in that it allows users to evaluate intersections among all combinations of a collection of gene sets, including, but not limited to annotations to controlled vocabularies. There are numerous applications of this approach. Sets can be stored, shared and compared privately, among user defined groups of investigators, and across all users.

National Genomic Resources Repository

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National Genomic Resources Repository is established as an institutional framework for methodical and centralized efforts to collect, generate, conserve and distribute genomic resources for agricultural research.

Liverpool John Moores University Research Data Repository

LJMU Research Data Repository

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The LJMU Research Data Repository is the University's institutional repository where researchers can safely deposit and store research data on an Open Access basis. Data stored in the LJMU Research Data Repository can be made freely available to anyone online and located by users of web search engines.

UWE Research Data Repository

University of West England Research Data Repository

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The UWE Research Data Repository holds research data and metadata associated with existing or forthcoming EPSRC-funded publications, produced by UWE Bristol researchers.

Research Data JCU

James Cook University Research Data repository

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The Tropical Data Hub (TDH) Research Data repository makes data collections and datasets generated by James Cook University researchers searchable and accessible. This increases their visibility and facilitates sharing and collaboration both within JCU and externally. Services provided include archival storage, access controls (open access preferred), metadata review and DOI minting.

The Cancer Immunome Atlas

TCIA

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The Cancer Immunome Database (TCIA) provides results of comprehensive immunogenomic analyses of next generation sequencing data (NGS) data for 20 solid cancers from The Cancer Genome Atlas (TCGA) and other datasource. The Cancer Immunome Atlas (TCIA) was developed and is maintained at the Division of Bioinformatics (ICBI). The database can be queried for the gene expression of specific immune-related gene sets, cellular composition of immune infiltrates (characterized using gene set enrichment analyses and deconvolution), neoantigens and cancer-germline antigens, HLA types, and tumor heterogeneity (estimated from cancer cell fractions). Moreover it provides survival analyses for different types immunological parameters. TCIA will be constantly updated with new data and results.

Qualitative Data Repository

QDR

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The Qualitative Data Repository (QDR) is a dedicated archive for storing and sharing digital data (and accompanying documentation) generated or collected through qualitative and multi-method research in the social sciences. QDR provides data management consulting services and actively curates all data projects, maintaining the value and usefulness of the data over time, and ensuring their availability and findability for re-use.

Redape

Repositório de Dados de Pesquisa da Embrapa

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'Redape' is a digital repository that aims to preserve and disseminate research data produced by the Brazilian Agricultural Research Corporation - Embrapa. It allows the organization, management and publication of data in accordance with the FAIR principles.

Repository of the Faculty of Science

Repository of the Faculty of Science of the University of Zagreb

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Repository of the Faculty of Science is institutional repository that gathers, permanently stores and allows access to the results of scientific and intellectual property of the Faculty of Science, University of Zagreb. The objects that can be stored in the repository are research data, scientific articles, conference papers, theses, dissertations, books, teaching materials, images, video and audio files, and presentations. To improve searchability, all materials are described with predetermined set of metadata.

Macquarie University Research Data Repository

Macquarie University RDR

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Macquarie University's Institutional Research Data Repository (RDR) allows researchers to upload, publish, search and download research data. The RDR promotes collaboration, data sharing and discovery amongst researchers globally according to FAIR data principles. The RDR is based on Figshare for Institutions, which has been specifically tailored to suit the needs of the Macquarie University research community.

St Andrews Research portal - Research Data

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The St Andrews research portal features the research activities within the University of St Andrews.

Collaborative Psychiatric Epidemiology Surveys 2001 - 2003

CPES

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CPES provides access to information that relates to mental disorders among the general population. Its primary goal is to collect data about the prevalence of mental disorders and their treatments in adult populations in the United States. It also allows for research related to cultural and ethnic influences on mental health. CPES combines the data collected in three different nationally representative surveys (National Comorbidity Survey Replication, National Survey of American Life, National Latino and Asian American Study).

IMAGINE

IMAGINE - Repository of the Institute of molecular genetics and genetic engineering

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IMAGINE is the institutional digital repository of the Institute of molecular genetics and genetic engineering. It provides open access to publications and other research outputs resulting from the projects implemented by this institution. The software platform of the repository is adapted to the modern standards applied in the dissemination of scientific publications and is compatible with international infrastructure in this field.

Spatial Data Repository

The DHS Program

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The Spatial Data Repository provides geographically-linked health and demographic data from the MEASURE Demographic and Health Surveys (DHS) project and the U.S. Census Bureau for mapping in a geographic information system (GIS).

International Long Term Ecological Research

ILTER

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ILTER is a 'network of networks', a global network of research sites located in a wide array of ecosystems that can help understand environmental change across the globe. ILTER's focus is on long-term, site-based research and monitoring.

The National Practitioner Data Bank

NPDB

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The National Practitioner Data Bank (NPDB), or "the Data Bank," is a confidential information clearinghouse created by Congress with the primary goals of improving health care quality, protecting the public, and reducing health care fraud and abuse in the U.S.

Array Express

functional genomics data

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ArrayExpress is one of the major international repositories for high-throughput functional genomics data from both microarray and high-throughput sequencing studies, many of which are supported by peer-reviewed publications. Data sets are submitted directly to ArrayExpress and curated by a team of specialist biological curators. In the past (until 2018) datasets from the NCBI Gene Expression Omnibus database were imported on a weekly basis. Data is collected to MIAME and MINSEQE standards.

PUB Data Publications

PUB Datenpublikationen

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PUB represents the central publication data service of Bielefeld University. It serves Bielefeld academics to easily create and administer their personal publication lists and make them available on the web. The University Bielefeld encourages scientists to publish their research data on research data archives. The publications are intended to take account into personal and business related interests and carried out unter mandatory license conditions. The Bielefeld University supports faculties and scientific institutions to link their offerings with global data archives. The university-wide service " PUB - Publications at Bielefeld University " allows the primary publication of research data.