Repository details
GeneWeaver.org
Name of repository
GeneWeaver.org
Additional name(s)
- The Ontological Discovery Environment
- ODE
Repository URL
Subject(s)
Description
GeneWeaver combines cross-species data and gene entity integration, scalable hierarchical analysis of user data with a community-built and curated data archive of gene sets and gene networks, and tools for data driven comparison of user-defined biological, behavioral and disease concepts. Gene Weaver allows users to integrate gene sets across species, tissue and experimental platform. It differs from conventional gene set over-representation analysis tools in that it allows users to evaluate intersections among all combinations of a collection of gene sets, including, but not limited to annotations to controlled vocabularies. There are numerous applications of this approach. Sets can be stored, shared and compared privately, among user defined groups of investigators, and across all users.
Contact(s)
- Elissa.Chesler@jax.org
- Erich_Baker@baylor.edu
- geneweaver@gmail.com
Keyword(s)
Persistent identifier(s) of the repository
Repository type(s)
- disciplinary
Mission statement for designated community
Research data repository language(s)
- English
Data and/or service provider
- dataProvider
Institutions (2)
Institution
Additional name(s)
- NIAAA
- INIA Stress
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- JAX
Country
Type(s) of responsibility
- general
- technical
Type of institution
non-profit
Policies (4)
Database access
Type of access to research data repository
open
Data access (3)
Type of access to data
open
Type of access to data
restricted
Data access restriction type(s)
- registration
- other
Type of access to data
closed
Data licenses (1)
DataLicense
Data upload (1)
Type of data upload
restricted
Data upload restriction type(s)
- registration
Data upload license (1)
Data upload license name
Name of the repository software
- MySQL
Data citation guideline
Author identifier system(s)
- ORCID
Enhanced Publication
yes
Quality management
unknown
Application programming interfaces (1)
Metadata standards (1)
Metadata standard
Remarks
Entry date
2017-09-07
Last update
2022-12-14
Cite this re3data.org record:
re3data.org: GeneWeaver.org; editing status 2022-12-14; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3248T last accessed: 2025-04-25- Current projects
- EOSC FAIR-IMPACT
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-04-25
