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Found 36 result(s)

International Service of Geomagnetic Indices

ISGI

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The International Service of Geomagnetic Indices (ISGI) is in charge of the elaboration and dissemination of geomagnetic indices, and of tables of remarkable magnetic events, based on the report of magnetic observatories distributed all over the planet, with the help of ISGI Collaborating Institutes. The interaction between the solar wind, including plasma and interplanetary magnetic field, and the Earth's magnetosphere results in a transfer of energy and particles inside the magnetosphere. Solar wind characteristics are highly variable, and they have actually a direct influence on the shape and size of the magnetosphere, on the amount of transferred energy, and on the way this energy is dissipated. It is clear that the great diversity of sources of magnetic variations give rise to a great complexity in ground magnetic signatures. Geomagnetic indices aim at describing the geomagnetic activity or some of its components. Each geomagnetic index is related to different phenomena occurring in the magnetosphere, ionosphere and deep in the Earth in its own unique way. The location of a measurement, the timing of the measurement and the way the index is calculated all affect the type of phenomenon the index relates to. The IAGA endorsed geomagnetic indices and lists of remarkable geomagnetic events constitute unique temporal and spatial coverage data series homogeneous since middle of 19th century.

CIARD Ring

CIARDRING

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The CiardRING is a global directory of web-based information services and datasets for agricultural research for development (ARD). It is the principal tool created through the CIARD initiative to allow information providers to register their services and datasets in various categories and so facilitate the discovery of sources of agriculture-related information across the world. The RING aims to provide an infrastructure to improve the accessibility of the outputs of agricultural research and of information relevant to agriculture.

HUGO Gene Nomenclature Committee

HGNC

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The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

WorldWide Antimalarial Resistance Network

WWARN

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The WorldWide Antimalarial Resistance Network (WWARN) is a collaborative platform generating innovative resources and reliable evidence to inform the malaria community on the factors affecting the efficacy of antimalarial medicines. Access to data is provided through diverse Tools and Resources: WWARN Explorer, Molecular Surveyor K13 Methodology, Molecular Surveyor pfmdr1 & pfcrt, Molecular Surveyor dhfr & dhps.

IDEAS

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Welcome to the largest bibliographic database dedicated to Economics and available freely on the Internet. This site is part of a large volunteer effort to enhance the free dissemination of research in Economics, RePEc, which includes bibliographic metadata from over 1,800 participating archives, including all the major publishers and research outlets. IDEAS is just one of several services that use RePEc data. Authors are invited to register with RePEc to create an online profile. Then, anyone finding some of your research here can find your latest contact details and a listing of your other research. You will also receive a monthly mailing about the popularity of your works, your ranking and newly found citations. Besides that IDEAS provides software and public accessible data from Federal Reserve Bank.

International Mouse Phenotyping Consortium

IMPC

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The IMPC is a confederation of international mouse phenotyping projects working towards the agreed goals of the consortium: To undertake the phenotyping of 20,000 mouse mutants over a ten year period, providing the first functional annotation of a mammalian genome. Maintain and expand a world-wide consortium of institutions with capacity and expertise to produce germ line transmission of targeted knockout mutations in embryonic stem cells for 20,000 known and predicted mouse genes. Test each mutant mouse line through a broad based primary phenotyping pipeline in all the major adult organ systems and most areas of major human disease. Through this activity and employing data annotation tools, systematically aim to discover and ascribe biological function to each gene, driving new ideas and underpinning future research into biological systems; Maintain and expand collaborative “networks” with specialist phenotyping consortia or laboratories, providing standardized secondary level phenotyping that enriches the primary dataset, and end-user, project specific tertiary level phenotyping that adds value to the mammalian gene functional annotation and fosters hypothesis driven research; and Provide a centralized data centre and portal for free, unrestricted access to primary and secondary data by the scientific community, promoting sharing of data, genotype-phenotype annotation, standard operating protocols, and the development of open source data analysis tools. Members of the IMPC may include research centers, funding organizations and corporations.

IntAct

IntAct Molecular Interaction Database

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IntAct provides a freely available, open source database system and analysis tools for molecular interaction data. All interactions are derived from literature curation or direct user submissions and are freely available.

Monash Bridges

monash.figshare (formerly)

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Bridges is Monash University's repository for research data, collections, and research activity outputs. It is also the home of the University's online archive of PhD and Masters by Research theses.

US Virtual Astronomical Observatory

VAO

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The US Virtual Astronomical Observatory (VAO) is the VO effort based in the US, and it is one of many VO projects currently underway worldwide. The primary emphasis of the VAO is to provide new scientific research capabilities to the astronomy community. Thus an essential component of the VAO activity is obtaining input from US astronomers about the research tools that are most urgently needed in their work, and this information will guide the development efforts of the VAO. >>>!!!<<< Funding discontinued in 2014 and all software, documentation, and other digital assets developed under the VAO are stored in the VAO Project Repository https://sites.google.com/site/usvirtualobservatory/ . Code is archived on Github https://github.com/TomMcGlynn/usvirtualobservatory . >>>!!!<<<

MatrixDB

Extracellular Matrix interactions DataBase

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MatrixDB is a freely available database focused on interactions established by extracellular proteins and polysaccharides. MatrixDB takes into account the multimetric nature of the extracellular proteins (e.g. collagens, laminins and thrombospondins are multimers). MatrixDB includes interaction data extracted from the literature by manual curation in our lab, and offers access to relevant data involving extracellular proteins provided by our IMEx partner databases through the PSICQUIC webservice, as well as data from the Human Protein Reference Database. MatrixDB is in charge of the curation of papers published in Matrix Biology since January 2009

melbourne.figshare.com

University of Melbourne data repository

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melbourne.figshare.com is a specialised service that has been tailored according to specific needs and requirements of the University and our community of researchers. The service offered at the University is free to use, provides 100GB of data, and stores all data on the University's storage system.

SBGrid Data Bank

Structural Biology Data Grid

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Open access to macromolecular X-ray diffraction and MicroED datasets. The repository complements the Worldwide Protein Data Bank. SBDG also hosts reference collection of biomedical datasets contributed by members of SBGrid, Harvard and pilot communities.

CSISA Data Repository

Cereal Systems Initiative for South Asia (CSISA) Research Data

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In keeping with the open data policies of the U.S. Agency for International Development (USAID) and Bill & Melinda Gates Foundation, the Cereal Systems Initiative for South Asia (CSISA) has launched the CSISA Data Repository to ensure public accessibility to key data sets, including crop cut data- directly observed, crop yield estimates, on-station and on-farm research trial data and socioeconomic surveys. CSISA is a science-driven and impact-oriented regional initiative for increasing the productivity of cereal-based cropping systems in Bangladesh, India and Nepal, thus improving food security and farmers’ livelihoods. CSISA generates data that is of value and interest to a diverse audience of researchers, policymakers and the public. CSISA’s data repository is hosted on Dataverse, an open source web application developed at Harvard University to share, preserve, cite, explore and analyze research data. CSISA’s repository contains rich datasets, including on-station trial data from 2009–17 about crop and resource management practices for sustainable future cereal-based cropping systems. Collection of this data occurred during the long-term, on-station research trials conducted at the Indian Council of Agricultural Research – Research Complex for the Eastern Region in Bihar, India. The data include information on agronomic management for the sustainable intensification of cropping systems, mechanization, diversification, futuristic approaches to sustainable intensification, long-term effects of conservation agriculture practices on soil health and the pest spectrum. Additional trial data in the repository includes nutrient omission plot technique trials from Bihar, eastern Uttar Pradesh and Odisha, India, covering 2012–15, which help determine the indigenous nutrient supplying ability of the soil. This data helps develop precision nutrient management approaches that would be most effective in different types of soils. CSISA’s most popular dataset thus far includes crop cut data on maize in Odisha, India and rice in Nepal. Crop cut datasets provide ground-truthed yield estimates, as well as valuable information on relevant agronomic and socioeconomic practices affecting production practices and yield. A variety of research data on wheat systems are also available from Bangladesh and India. Additional crop cut data will also be coming online soon. Cropping system-related data and socioeconomic data are in the repository, some of which are cross-listed with a Dataverse run by the International Food Policy Research Institute. The socioeconomic datasets contain baseline information that is crucial for technology targeting, as well as to assess the adoption and performance of CSISA-supported technologies under smallholder farmers’ constrained conditions, representing the ultimate litmus test of their potential for change at scale. Other highly interesting datasets include farm composition and productive trajectory information, based on a 20-year panel dataset, and numerous wheat crop cut and maize nutrient omission trial data from across Bangladesh.

Infectious Diseases Data Observatory

IDDO

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The Infectious Diseases Data Observatory (IDDO) assembles clinical, laboratory and epidemiological data on a collaborative platform to be shared with the research and humanitarian communities. The data are analysed to generate reliable evidence and innovative resources that enable research-driven responses to the major challenges of emerging and neglected infections. Access is available to individual patient data held for malaria and Ebola virus disease. Resources for visceral leishmaniasis, schistosomiasis and soil transmitted helminths, Chagas disease and COVID-19 are under development. IDDO contains the following repositories : COVID-19 Data Platform, Chagas Data Platform, Schistosomiasis & Soil Transmitted Helminths Data Platform, Visceral Leishmaniasis Data Platform, Ebola Data Platform, WorldWide Antimalarial Resistance Network (WWARN)

National Virtual Observatory

NVO

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<<<!!!>>> NVO - National Virtual Observatory is closed now <<<!!! >>> The National Virtual Observatory (NVO) was the predecessor of the VAO. It was a research project aimed at developing the technologies that would be used to build an operational Virtual Observatory. With the NVO era now over, a new organization has been funded in its place, with the explicit goal of creating useful tools for users to take advantage of the groundwork laid by the NVO. To carry on with the NVO's goals, we hereby introduce you to the Virtual Astronomical Observatory http://www.usvao.org/

ICET

International Center for Earth Tides

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>>>!!!<<<The IGETS data base at GFZ Potsdam http://www.re3data.org/repository/r3d100010300 continues the activities of the International Center for Earth Tides (ICET), in particular, in collecting, archiving and distributing Earth tide records from long series of gravimeters, tiltmeters, strainmeters and other geodynamic sensors. >>>!!!<<< The ICET Data Bank contains results from 360 tidal gravity stations: hourly values, main tidal waves obtained by least squares analyses, residual vectors, oceanic attraction and loading vectors. The Data Bank contains also data from tiltmeters and extensometers. ICET is responsible for the Information System and Data Center of the Global Geodynamic Project (GGP). The tasks ascribed to ICET are : to collect all available measurements of Earth tides (which is its task as World Data Centre C), to evaluate these data by convenient methods of analysis in order to reduce the very large amount of measurements to a limited number of parameters which should contain all the desired and needed geophysical information, to compare the data from different instruments and different stations distributed all over the world, evaluate their precision and accuracy from the point of view of internal errors as well as external errors, to help to solve the basic problem of calibrations and to organize reference stations or build reference calibration devices, to fill gaps in information or data as far as feasible, to build a data bank allowing immediate and easy comparison of Earth tide parameters with different Earth models and other geodetical and geophysical parameters like geographical position, Bouguer anomaly, crustal thickness and age, heat flow, ... to ensure a broad diffusion of the results and information to all interested laboratories and individual scientists.

BioVel

Biodiversity Virtual e-Laboratory

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<<<!!!<<< This repository is no longer available. >>>!!!>>> BioVeL is a virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. BioVeL supports the development and use of workflows to process data. It offers the possibility to either use already made workflows or create own. BioVeL workflows are stored in MyExperiment - Biovel Group http://www.myexperiment.org/groups/643/content. They are underpinned by a range of analytical and data processing functions (generally provided as Web Services or R scripts) to support common biodiversity analysis tasks. You can find the Web Services catalogued in the BiodiversityCatalogue.

Public Geodata Repository

OSGeo Public Geodata Repository

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OSGeo's mission is to support the collaborative development of open source geospatial software, in part by providing resources for projects and promoting freely available geodata. The Public Geodata Repository is a distributed repository and registry of data sources free to access, reuse, and re-distribute.

ECCAD - the GEIA database

Emissions of atmospheric Compounds & Compilation of Ancillary Data

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The main goal of the ECCAD project is to provide scientific and policy users with datasets of surface emissions of atmospheric compounds, and ancillary data, i.e. data required to estimate or quantify surface emissions. The supply of ancillary data - such as maps of population density, maps of fires spots, burnt areas, land cover - could help improve and encourage the development of new emissions datasets. ECCAD offers: Access to global and regional emission inventories and ancillary data, in a standardized format Quick visualization of emission and ancillary data Rationalization of the use of input data in algorithms or emission models Analysis and comparison of emissions datasets and ancillary data Tools for the evaluation of emissions and ancillary data ECCAD is a dynamical and interactive database, providing the most up to date datasets including data used within ongoing projects. Users are welcome to add their own datasets, or have their regional masks included in order to use ECCAD tools.

European Nucleotide Archive

ENA

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The European Nucleotide Archive (ENA) captures and presents information relating to experimental workflows that are based around nucleotide sequencing. A typical workflow includes the isolation and preparation of material for sequencing, a run of a sequencing machine in which sequencing data are produced and a subsequent bioinformatic analysis pipeline. ENA records this information in a data model that covers input information (sample, experimental setup, machine configuration), output machine data (sequence traces, reads and quality scores) and interpreted information (assembly, mapping, functional annotation). Data arrive at ENA from a variety of sources. These include submissions of raw data, assembled sequences and annotation from small-scale sequencing efforts, data provision from the major European sequencing centres and routine and comprehensive exchange with our partners in the International Nucleotide Sequence Database Collaboration (INSDC). Provision of nucleotide sequence data to ENA or its INSDC partners has become a central and mandatory step in the dissemination of research findings to the scientific community. ENA works with publishers of scientific literature and funding bodies to ensure compliance with these principles and to provide optimal submission systems and data access tools that work seamlessly with the published literature.

InnateDB

A Knowlede Resource for Innate Immunity Interactions & Pathways

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InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. The database captures an improved coverage of the innate immunity interactome by integrating known interactions and pathways from major public databases together with manually-curated data into a centralised resource. The database can be mined as a knowledgebase or used with our integrated bioinformatics and visualization tools for the systems level analysis of the innate immune response.

The Language Archive

TLA

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The Language Archive at the Max Planck Institute in Nijmegen provides a unique record of how people around the world use language in everyday life. It focuses on collecting spoken and signed language materials in audio and video form along with transcriptions, analyses, annotations and other types of relevant material (e.g. photos, accompanying notes).

PDBj

Protein Data Bank Japan

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PDBj (Protein Data Bank Japan) provides a centralized PDB archive of macromolecular structures, integrated tools for data retrieval, visualization, and functional characterization. PDBj is supported by JST-NBDC and Osaka University.

SedDB

Integrated Data Management for Sediment Geochemistry

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<<<!!!<<< This repository is no longer available. >>>!!!>>>! SedDB complements current geological data systems (PetDB, EarthChem, NavDat and GEOROC) with an integrated compilation of geochemistry of marine and continental sediments. Notice: Content of SedDB has been static since 2014 and will not be updated until further notice.

International Argo Project

Argo.net

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Argo is an international programme using autonomous floats to collect temperature, salinity and current data in the ice-free oceans. It is teamed with the Jason ocean satellite series. Argo will soon reach its target of 3000 floats delivering data within 24 hours to researchers and operational centres worldwide. 23 countries contribute floats to Argo and many others help with float deployments. Argo has revolutionized the collection of information from inside the oceans. ARGO Project is organized in regional and national Centers with a Project Office, an Information Center (AIC) and 2 Global Data Centers (GDAC), at the United States and at France. Each DAC submits regularly all its new files to both USGODAE and Coriolis GDACs.The whole Argo data set is available in real time and delayed mode from the global data centres (GDACs). The internet addresses are: https://nrlgodae1.nrlmry.navy.mil/ and http://www.argodatamgt.org