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Found 42 result(s)

Research Compendia

Researchcompendia

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>>>>!!!<<< As stated 2017-06-27 The website http://researchcompendia.org is no longer available; repository software is archived on github https://github.com/researchcompendia >>>!!!<<< The ResearchCompendia platform is an attempt to use the web to enhance the reproducibility and verifiability—and thus the reliability—of scientific research. we provide the tools to publish the "actual scholarship" by hosting data, code, and methods in a form that is accessible, trackable, and persistent. Some of our short term goals include: To expand and enhance the platform including adding executability for a greater variety of coding languages and frameworks, and enhancing output presentation. To expand usership and to test the ResearchCompendia model in a number of additional fields, including computational mathematics, statistics, and biostatistics. To pilot integration with existing scholarly platforms, enabling researchers to discover relevant Research Compendia websites when looking at online articles, code repositories, or data archives.

Project Data Sphere

PDS

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Project Data Sphere, LLC, operates a free digital library-laboratory where the research community can broadly share, integrate and analyze historical, de-identified, patient-level data from academic and industry cancer Phase II-III clinical trials. These patient-level datasets are available through the Project Data Sphere platform to researchers affiliated with life science companies, hospitals and institutions, as well as independent researchers, at no cost and without requiring a research proposal.

CRAWDAD

Community Resource for Archiving Wireless Data At Dartmouth (US site)

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<<<!!!<<< CRAWDAD has moved to IEEE-Dataport https://www.re3data.org/repository/r3d100012569 The datasets in the Community Resource for Archiving Wireless Data at Dartmouth (CRAWDAD) repository are now hosted as the CRAWDAD Collection on IEEE Dataport. After nearly two decades as a stand-alone archive at crawdad.org, the migration of the collection to IEEE DataPort provides permanence and new visibility. >>>!!!>>>

World Data Centre for Space Weather

WDC - Space Weather, Australia

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The World Data Centre section provides software and data catalogue information and data produced by IPS Radio and Space Services over the past few past decades. You can download data files, plot graphs from data files, check data availability, retrieve data sets and station information.

ChIP-Seq Transcription Factor Data

ChIP-Seq

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We developed a method, ChIP-sequencing (ChIP-seq), combining chromatin immunoprecipitation (ChIP) and massively parallel sequencing to identify mammalian DNA sequences bound by transcription factors in vivo. We used ChIP-seq to map STAT1 targets in interferon-gamma (IFN-gamma)-stimulated and unstimulated human HeLa S3 cells, and compared the method's performance to ChIP-PCR and to ChIP-chip for four chromosomes.For both Chromatin- immunoprecipation Transcription Factors and Histone modifications. Sequence files and the associated probability files are also provided.

EUDAT

European Data Infrastructure

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The EUDAT project aims to contribute to the production of a Collaborative Data Infrastructure (CDI). The project´s target is to provide a pan-European solution to the challenge of data proliferation in Europe's scientific and research communities. The EUDAT vision is to support a Collaborative Data Infrastructure which will allow researchers to share data within and between communities and enable them to carry out their research effectively. EUDAT aims to provide a solution that will be affordable, trustworthy, robust, persistent and easy to use. EUDAT comprises 26 European partners, including data centres, technology providers, research communities and funding agencies from 13 countries. B2FIND is the EUDAT metadata service allowing users to discover what kind of data is stored through the B2SAFE and B2SHARE services which collect a large number of datasets from various disciplines. EUDAT will also harvest metadata from communities that have stable metadata providers to create a comprehensive joint catalogue to help researchers find interesting data objects and collections.

GLOBE

Global Collaboration Engine

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GLOBE (Global Collaboration Engine) is an online collaborative environment that enables land change researchers to share, compare and integrate local and regional studies with global data to assess the global relevance of their work.

Open Data by Socrata

Socrata

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>>>!!!<<< This site is going away on April 1, 2021. General access to the site has been disabled and community users will see an error upon login. >>>!!!<<< Socrata’s cloud-based solution allows government organizations to put their data online, make data-driven decisions, operate more efficiently, and share insights with citizens.

DARTS

ISAS Data Archive and Transmission System

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DARTS primarily archives high-level data products obtained by JAXA's space science missions in astrophysics (X-rays, radio, infrared), solar physics, solar-terrestrial physics, and lunar and planetary science. In addition, we archive related space science data products obtained by other domestic or foreign institutes, and provide data services to facilitate use of these data.

Merritt

UC3Merritt

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Merritt is a curation repository for the preservation of and access to the digital research data of the ten campus University of California system and external project collaborators. Merritt is supported by the University of California Curation Center (UC3) at the California Digital Library (CDL). While Merritt itself is content agnostic, accepting digital content regardless of domain, format, or structure, it is being used for management of research data, and it forms the basis for a number of domain-specific repositories, such as the ONEShare repository for earth and environmental science and the DataShare repository for life sciences. Merritt provides persistent identifiers, storage replication, fixity audit, complete version history, REST API, a comprehensive metadata catalog for discovery, ATOM-based syndication, and curatorially-defined collections, access control rules, and data use agreements (DUAs). Merritt content upload and download may each be curatorially-designated as public or restricted. Merritt DOIs are provided by UC3's EZID service, which is integrated with DataCite. All DOIs and associated metadata are automatically registered with DataCite and are harvested by Ex Libris PRIMO and Thomson Reuters Data Citation Index (DCI) for high-level discovery. Merritt is also a member node in the DataONE network; curatorially-designated data submitted to Merritt are automatically registered with DataONE for additional replication and federated discovery through the ONEMercury search/browse interface.

Candida Genome Database

CGD

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Candida Genome Database, a resource for genomic sequence data and gene and protein information for Candida albicans and related species. CGD is based on the Saccharomyces Genome Database. The Candida Genome Database (CGD) provides online access to genomic sequence data and manually curated functional information about genes and proteins of the human pathogen Candida albicans and related species. C. albicans is the best studied of the human fungal pathogens. It is a common commensal organism of healthy individuals, but can cause debilitating mucosal infections and life-threatening systemic infections, especially in immunocompromised patients. C. albicans also serves as a model organism for the study of other fungal pathogens.

Kaggle

Your home for data science

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Kaggle is a platform for predictive modelling and analytics competitions in which statisticians and data miners compete to produce the best models for predicting and describing the datasets uploaded by companies and users. This crowdsourcing approach relies on the fact that there are countless strategies that can be applied to any predictive modelling task and it is impossible to know beforehand which technique or analyst will be most effective.

dbSNP

SNV

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The NCBI Short Genetic Variations database, commonly known as dbSNP, catalogs short variations in nucleotide sequences from a wide range of organisms. These variations include single nucleotide variations, short nucleotide insertions and deletions, short tandem repeats and microsatellites. Short Genetic Variations may be common, thus representing true polymorphisms, or they may be rare. Some rare human entries have additional information associated withthem, including disease associations, genotype information and allele origin, as some variations are somatic rather than germline events. ***NCBI will phase out support for non-human organism data in dbSNP and dbVar beginning on September 1, 2017***

Tropical Cyclone Information System

JPL Tropical Cyclone Information System

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The JPL Tropical Cyclone Information System (TCIS) was developed to support hurricane research. There are three components to TCIS; a global archive of multi-satellite hurricane observations 1999-2010 (Tropical Cyclone Data Archive), North Atlantic Hurricane Watch and ASA Convective Processes Experiment (CPEX) aircraft campaign. Together, data and visualizations from the real time system and data archive can be used to study hurricane process, validate and improve models, and assist in developing new algorithms and data assimilation techniques.

Clouds and the Earth's Radiant Energy System

CERES Data Products

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The Clouds and the Earth’s Radiant Energy System (CERES) is a key component of the Earth Observing System (EOS) program. CERES instruments provide radiometric measurements of the Earth’s atmosphere from three broadband channels. CERES products include both solar-reflected and Earth-emitted radiation from the top of the atmosphere to the Earth's surface.

B2SHARE

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B2SHARE is a user-friendly, reliable and trustworthy way for researchers, scientific communities and citizen scientists to store and share small-scale research data from diverse contexts and disciplines. B2SHARE is able to add value to your research data via (domain tailored) metadata, and assigning citable Persistent Identifiers PIDs (Handles) to ensure long-lasting access and references. B2SHARE is one of the B2 services developed via EUDAT and long tail data deposits do not cost money. Special arrangements such as branding and special metadata elements can be made on request.

GrainGenes

A Database for Triticeae and Avena

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GrainGenes is a digital platform that serves small grains research communities as their central data repository and as a facilitator for community activities.

Edinburgh DataShare

DataShare

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Edinburgh DataShare is a digital repository of research data produced at the University of Edinburgh, hosted by the Research Data Service in Information Services. Edinburgh University researchers who have produced research data associated with an existing or forthcoming publication, or which has potential use for other researchers, are invited to upload their dataset for sharing and safekeeping. A persistent identifier and suggested citation will be provided.

depositar

研究資料寄存所

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depositar — taking the term from the Portuguese/Spanish verb for to deposit — is an online repository for research data. The site is built by the researchers for the researchers. You are free to deposit, discover, and reuse datasets on depositar for all your research purposes.

GESIS Data Archive

GESIS Long-term digital preservation

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GESIS preserves (mainly quantitative) social research data to make it available to the scientific research community. The data is described in a standardized way, secured for the long term, provided with a permanent identifier (DOI), and can be easily found and reused through browser-optimized catalogs (https://search.gesis.org/).

WHOI Argo Program

Woods Hole Oceanographic Institution Argo Program

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The Argo observational network consists of a fleet of 3000+ profiling autonomous floats deployed by about a dozen teams worldwide. WHOI has built about 10% of the global fleet. The mission lifetime of each float is about 4 years. During a typical mission, each float reports a profile of the upper ocean every 10 days. The sensors onboard record fundamental physical properties of the ocean: temperature and conductivity (a measure of salinity) as a function of pressure. The depth range of the observed profile depends on the local stratification and the float's mechanical ability to adjust it's buoyancy. The majority of Argo floats report profiles between 1-2 km depth. At each surfacing, measurements of temperature and salinity are relayed back to shore via satellite. Telemetry is usually received every 10 days, but floats at high-latitudes which are iced-over accumulate their data and transmit the entire record the next time satellite contact is established. With current battery technology, the best performing floats last 6+ years and record over 200 profiles.

Canadian Open Neuroscience Platform Portal

CONP

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The CONP portal is a web interface for the Canadian Open Neuroscience Platform (CONP) to facilitate open science in the neuroscience community. CONP simplifies global researcher access and sharing of datasets and tools. The portal internalizes the cycle of a typical research project: starting with data acquisition, followed by processing using already existing/published tools, and ultimately publication of the obtained results including a link to the original dataset. From more information on CONP, please visit https://conp.ca

Canadensys repository

Database of Vascular Plants of Canada

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Biological collections are replete with taxonomic, geographic, temporal, numerical, and historical information. This information is crucial for understanding and properly managing biodiversity and ecosystems, but is often difficult to access. Canadensys, operated from the Université de Montréal Biodiversity Centre, is a Canada-wide effort to unlock the biodiversity information held in biological collections.

World Glacier Monitoring Service

WGMS

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The World Glacier Monitoring Service (WGMS) collects standardized observations on changes in mass, volume, area and length of glaciers with time (glacier fluctuations), as well as statistical information on the distribution of perennial surface ice in space (glacier inventories). Such glacier fluctuation and inventory data are high priority key variables in climate system monitoring; they form a basis for hydrological modelling with respect to possible effects of atmospheric warming, and provide fundamental information in glaciology, glacial geomorphology and quaternary geology. The highest information density is found for the Alps and Scandinavia, where long and uninterrupted records are available. As a contribution to the Global Terrestrial/Climate Observing System (GTOS, GCOS), the Division of Early Warning and Assessment and the Global Environment Outlook of UNEP, and the International Hydrological Programme of UNESCO, the WGMS collects and publishes worldwide standardized glacier data.

Tropical Ecology Assessment and Monitoring Network

TEAM

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<<<!!!<<< The TEAM Network is moving to Wildlife Insights. TEAM Network and the Wildlife Picture Index Analytics system migrate to Wildlife Insights. https://www.wildlifeinsights.org/ >>>!!!>>>