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Found 10 result(s)

ARCHE

A Resource Centre for the HumanitiEs

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ARCHE (A Resource Centre for the HumanitiEs) is a service aimed at offering stable and persistent hosting as well as dissemination of digital research data and resources for the Austrian humanities community. ARCHE welcomes data from all humanities fields. ARCHE is the successor of the Language Resources Portal (LRP) and acts as Austria’s connection point to the European network of CLARIN Centres for language resources.

Environmental Information Data Centre

EIDC

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The Environmental Information Data Centre (EIDC) is part of the Natural Environment Research Council's (NERC) Environmental Data Service and is hosted by the UK Centre for Ecology & Hydrology (UKCEH). We manage nationally-important datasets concerned with the terrestrial and freshwater sciences.

MaizeGDB

Maize Genetics and Genomics Database

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The Maize Genetics and Genomics Database focuses on collecting data related to the crop plant and model organism Zea mays. The project's goals are to synthesize, display, and provide access to maize genomics and genetics data, prioritizing mutant and phenotype data and tools, structural and genetic map sets, and gene models. MaizeGDB also aims to make the Maize Newsletter available, and provide support services to the community of maize researchers. MaizeGDB is working with the Schnable lab, the Panzea project, The Genome Reference Consortium, and iPlant Collaborative to create a plan for archiving, dessiminating, visualizing, and analyzing diversity data. MMaizeGDB is short for Maize Genetics/Genomics Database. It is a USDA/ARS funded project to integrate the data found in MaizeDB and ZmDB into a single schema, develop an effective interface to access this data, and develop additional tools to make data analysis easier. Our goal in the long term is a true next-generation online maize database.aize genetics and genomics database.

AusGeochem

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AusGeochem is an easy-to-use platform for uploading, visualising, analysing and discovering georeferenced sample information and data produced by various geoscience research institutions such as universities, geological survey agencies and museums. With respect to analytical research laboratories, AusGeochem provides a centralised repository allowing laboratories to upload, archive, disseminate and publish their datasets. The intuitive user interface (UI) allows users to access national publicly funded data quickly through the ability to view an area of interest, synthesise a variety of geochemical data in real-time, and extract the required data, gaining novel scientific insights through multi-method data collation. Lithodat Pty Ltd has integrated built-in data synthesis functions into the platform, such as cumulative age histograms, age vs elevation plots, and step-heating diagrams, allowing for rapid inter-study comparisons. Data can be extracted in multiple formats for re-use in a variety of software systems, allowing for the integration of regional datasets into machine learning and AI systems.

TreeGenes

A forest tree genome database

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TreeGenes is a genomic, phenotypic, and environmental data resource for forest tree species. The TreeGenes database and Dendrome project provide custom informatics tools to manage the flood of information.The database contains several curated modules that support the storage of data and provide the foundation for web-based searches and visualization tools. GMOD GUI tools such as CMAP for genetic maps and GBrowse for genome and transcriptome assemblies are implemented here. A sample tracking system, known as the Forest Tree Genetic Stock Center, sits at the forefront of most large-scale projects. Barcode identifiers assigned to the trees during sample collection are maintained in the database to identify an individual through DNA extraction, resequencing, genotyping and phenotyping. DiversiTree, a user-friendly desktop-style interface, queries the TreeGenes database and is designed for bulk retrieval of resequencing data. CartograTree combines geo-referenced individuals with relevant ecological and trait databases in a user-friendly map-based interface. ---- The Conifer Genome Network (CGN) is a virtual nexus for researchers working in conifer genomics. The CGN web site is maintained by the Dendrome Project at the University of California, Davis.

Worldwide Protein Data Bank

wwPDB

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The Protein Data Bank (PDB) is an archive of experimentally determined three-dimensional structures of biological macromolecules that serves a global community of researchers, educators, and students. The data contained in the archive include atomic coordinates, crystallographic structure factors and NMR experimental data. Aside from coordinates, each deposition also includes the names of molecules, primary and secondary structure information, sequence database references, where appropriate, and ligand and biological assembly information, details about data collection and structure solution, and bibliographic citations. The Worldwide Protein Data Bank (wwPDB) consists of organizations that act as deposition, data processing and distribution centers for PDB data. Members are: RCSB PDB (USA), PDBe (Europe) and PDBj (Japan), and BMRB (USA). The wwPDB's mission is to maintain a single PDB archive of macromolecular structural data that is freely and publicly available to the global community.

Repository for Open Data (RepOD)

Repository for Open Data

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RepOD is a general-purpose repository for open research data, offering all members of the academic community in Poland the possibility to deposit their work. It is intended for scientific data from all disciplines of knowledge and in all formats. The purpose of RepOD is to create a place where research data can be safely stored and openly shared with others.

CLARIN.SI repository

Slovenian CLARIN repository

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CLARIN.SI is the Slovenian node of the European CLARIN (Common Language Resources and Technology Infrastructure) Centers. The CLARIN.SI repository is hosted at the Jožef Stefan Institute and offers long-term preservation of deposited linguistic resources, along with their descriptive metadata. The integration of the repository with the CLARIN infrastructure gives the deposited resources wide exposure, so that they can be known, used and further developed beyond the lifetime of the projects in which they were produced. Among the resources currently available in the CLARIN.SI repository are the multilingual MULTEXT-East resources, the CC version of Slovenian reference corpus Gigafida, the morphological lexicon Sloleks, the IMP corpora and lexicons of historical Slovenian, as well as many other resources for a variety of languages. Furthermore, several REST-based web services are provided for different corpus-linguistic and NLP tasks.

Ag Data Commons

USDA’s Open Research Data

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Ag Data Commons provides access to a wide variety of open data relevant to agricultural research. We are a centralized repository for data already on the web, as well as for new data being published for the first time. While compliance with the U.S. Federal public access and open data directives is important, we aim to surpass them. Our goal is to foster innovative data re-use, integration, and visualization to support bigger, better science and policy.

Stanford Digital Repository

SDR

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The Stanford Digital Repository (SDR) is Stanford Libraries' digital preservation system. The core repository provides “back-office” preservation services – data replication, auditing, media migration, and retrieval -- in a secure, sustainable, scalable stewardship environment. Scholars and researchers across disciplines at Stanford use SDR repository services to provide ongoing, persistent, reliable access to their research outputs.