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Found 196 result(s)

BeetleBase

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<<<!!!<<< This database doesn't exist anymore. 2017-09-05 >>>!!!>>>

NMRshiftDB

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nmrshiftdb is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users. The nmrshiftdb2 software is open source, the data is published under an open content license. Please consult the documentation for more detailed information. nmrshiftdb2 is the continuation of the NMRShiftDB project with additional data and bugfixes and changes in the software.

Database of Genomic Variants Archive

DGVa

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<<<!!!<<< Phasing out support for the Database of Genomic Variants archive (DGVa). The submission, archiving, and presentation of structural variation services offered by the DGVa is transitioning to the European Variation Archive (EVA) https://www.re3data.org/repository/r3d100011553. All of the data shown in the DGVa website is already searchable and browsable from the EVA Study Browser. Submission of structural variation data to EVA is done using the VCF format. The VCF specification allows representing multiple types of structural variants such as insertions, deletions, duplications and copy-number variants. Other features such as symbolic alleles, breakends, confidence intervals etc., support more complex events, such as translocations at an imprecise position. >>>!!!>>>

Water Quality Portal

WQP

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The Water Quality Portal (WQP) is a cooperative service sponsored by the United States Geological Survey (USGS), the Environmental Protection Agency (EPA) and the National Water Quality Monitoring Council (NWQMC) that integrates publicly available water quality data from the USGS National Water Information System (NWIS) the EPA STOrage and RETrieval (STORET) Data Warehouse, and the USDA ARS Sustaining The Earth’s Watersheds - Agricultural Research Database System (STEWARDS) . It serves water quality data collected by over 400 state, federal, tribal, and local agencies in the United States. As of July 2015, over 265 million results from over 2.2 million monitoring locations are currently accessible through the portal. The portal reports samples and results collected from each location since the beginning of the databases.

The USGS Land Cover Institute

LCI

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The USGS currently houses the institute at the Center for Earth Resources Observation and Science (EROS) in Sioux Falls, South Dakota. The LCI will address land cover topics from local to global scales, and in both domestic and international settings. The USGS through the Land Cover Institute serves as a facilitator for land cover and land use science, applications, and production functions. The institute assists in the availability and technical support of land cover data sets through increasing public and scientific awareness of the importance of land cover science. LCI continues, after the reorganization of the World Data Centers in 2009, serving as the World Data Center (WDC) for land cover data for access to, or information about, land cover data of the world

Index to Marine & Lacustrine Geological Samples

IMLGS

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The Index to Marine and Lacustrine Geological Samples is a tool to help scientists locate and obtain geologic material from sea floor and lakebed cores, grabs, and dredges archived by participating institutions around the world. Data and images related to the samples are prepared and contributed by the institutions for access via the IMLGS and long-term archive at NGDC. Before proposing research on any sample, please contact the curator for sample condition and availability. A consortium of Curators guides the IMLGS, maintained on behalf of the group by NGDC, since 1977.

Atmospheric Infrared Sounder

AIRS

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AIRS moves climate research and weather prediction into the 21st century. AIRS is one of six instruments on board the Aqua satellite, part of the NASA Earth Observing System. AIRS along with its partner microwave instrument the Advanced Microwave Sounding Unit AMSU-A, represents the most advanced atmospheric sounding system ever deployed in space. Together these instruments observe the global water and energy cycles, climate variation and trends, and the response of the climate system to increased greenhouse gases.

Copernicus

The European Earth Observation Pogramme

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Copernicus is a European system for monitoring the Earth. Copernicus consists of a complex set of systems which collect data from multiple sources: earth observation satellites and in situ sensors such as ground stations, airborne and sea-borne sensors. It processes these data and provides users with reliable and up-to-date information through a set of services related to environmental and security issues. The services address six thematic areas: land monitoring, marine monitoring, atmosphere monitoring, climate change, emergency management and security. The main users of Copernicus services are policymakers and public authorities who need the information to develop environmental legislation and policies or to take critical decisions in the event of an emergency, such as a natural disaster or a humanitarian crisis. Based on the Copernicus services and on the data collected through the Sentinels and the contributing missions , many value-added services can be tailored to specific public or commercial needs, resulting in new business opportunities. In fact, several economic studies have already demonstrated a huge potential for job creation, innovation and growth.

NOAA Antarctic UV Monitoring Network

formerly: National Science Foundation Polar Programs UV Monitoring Network

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The National Science Foundation (NSF) Ultraviolet (UV) Monitoring Network provides data on ozone depletion and the associated effects on terrestrial and marine systems. Data are collected from 7 sites in Antarctica, Argentina, United States, and Greenland. The network is providing data to researchers studying the effects of ozone depletion on terrestrial and marine biological systems. Network data is also used for the validation of satellite observations and for the verification of models describing the transfer of radiation through the atmosphere.

Genomic Expression Archive

GEA

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Genomic Expression Archive (GEA) is a public database of functional genomics data such as gene expression, epigenetics and genotyping SNP array. Both microarray- and sequence-based data are accepted in the MAGE-TAB format in compliance with MIAME and MINSEQE guidelines, respectively. GEA issues accession numbers, E-GEAD-n to experiment and A-GEAD-n to array design. Data exchange between GEA and EBI ArrayExpress is planned.

NCBI Influenza Virus Resource

NCBI Flu

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This resource allows users to search for and compare influenza virus genomes and gene sequences taken from GenBank. It also provides a virus sequence annotation tool and links to other influenza resources: NIAID project, JCVI Flu, Influenza research database, CDC Flu, Vaccine Selection and WHO Flu. NOTE: The redirects that are planned for completion by May 2024 will NOT impact the Influenza Virus Resource in any way. The Influenza Virus Resource will continue to be available, serving up data to support our Flu-research community.

NCBI Protein Clusters

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The Entrez Protein Clusters database contains annotation information, publications, structures and analysis tools for related protein sequences encoded by complete genomes. The data available in the Protein Clusters Database is generated from prokaryotic genomic studies and is intended to assist researchers studying micro-organism evolution as well as other biological sciences. Available genomes include plants and viruses as well as organelles and microbial genomes.

GHRC

Global Hydrology Resource Center

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The Global Hydrology Resource Center (GHRC) provides both historical and current Earth science data, information, and products from satellite, airborne, and surface-based instruments. GHRC acquires basic data streams and produces derived products from many instruments spread across a variety of instrument platforms.

NCBI Clone DB

NCBI clone registry

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<<<!!!<<< NCBI announced plans to retire the Clone DB web interface. Pursuant to this retirement, starting on May 27, 2019, all web pages associated with Clone DB and CloneFinder will redirect to this blog post https://ncbiinsights.ncbi.nlm.nih.gov/?s=clone+db. Links to Clone DB from the NCBI home page will also be going away. >>>!!!>>>

Electron Microscopy Public Image Archive

EMPIAR

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EMPIAR, the Electron Microscopy Public Image Archive, is a public resource for raw, 2D electron microscopy images. Here, you can browse, upload, download and reprocess the thousands of raw, 2D images used to build a 3D structure. The purpose of EMPIAR is to provide an easy access to the state-of-the-art raw data to facilitate methods development and validation, which will lead to better 3D structures. It complements the Electron Microscopy Data Bank (EMDB), where 3D images are stored, and uses the fault-tolerant Aspera platform for data transfers

Broad GDAC Firehose

Genome Data Analysis Center

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Born of the desire to systematize analyses from The Cancer Genome Atlas pilot and scale their execution to the dozens of remaining diseases to be studied, GDAC Firehose now sits atop terabytes of analysis-ready TCGA data and reliably executes thousands of pipelines per month. More information: https://broadinstitute.atlassian.net/wiki/spaces/GDAC/

Integrated Relational Enzyme database

IntEnz

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IntEnz contains the recommendation of the Nomenclature Committee of the International Union of Biochemistry and Molecular Biology on the nomenclature and classification of enzyme-catalyzed reactions. Users can browse by enzyme classification or use advanced search options to search enzymes by class, subclass and sub-subclass information.

World Data Center for Meteorology, Asheville

WDC - Meteorology, Asheville

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WDC for Meteorology, Asheville acquires, catalogues, and archives data and makes them available to requesters in the international scientific community. Data are exchanged with counterparts, WDC for Meteorology, Obninsk and WDC for Meteorology, Beijing as necessary to improve access. Special research data sets prepared under international programs such as the IGY, World Climate Program (WCP), Global Atmospheric Research Program (GARP), etc., are archived and made available to the research community. All data and special data sets contributed to the WDC are available to scientific investigators without restriction. Data are available from 1755 to 2015.

Prompt Assessment of Global Earthquakes for Response

PAGER

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PAGER (Prompt Assessment of Global Earthquakes for Response) is an automated system that produces content concerning the impact of significant earthquakes around the world, informing emergency responders, government and aid agencies, and the media of the scope of the potential disaster. PAGER rapidly assesses earthquake impacts by comparing the population exposed to each level of shaking intensity with models of economic and fatality losses based on past earthquakes in each country or region of the world. Earthquake alerts – which were formerly sent based only on event magnitude and location, or population exposure to shaking – now will also be generated based on the estimated range of fatalities and economic losses. PAGER uses these earthquake parameters to calculate estimates of ground shaking by using the methodology and software developed for ShakeMaps. ShakeMap sites provide near-real-time maps of ground motion and shaking intensity following significant earthquakes. These maps are used by federal, state, and local organizations, both public and private, for post-earthquake response and recovery, public and scientific information, as well as for preparedness exercises and disaster planning.

Precipitation Processing System

PPS

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The Precipitation Processing System (PPS) evolved from the Tropical Rainfall Measuring Mission (TRMM) Science Data and Information System (TSDIS). The purpose of the PPS is to process, analyze and archive data from the Global Precipitation Measurement (GPM) mission, partner satellites and the TRMM mission. The PPS also supports TRMM by providing validation products from TRMM ground radar sites. All GPM, TRMM and Partner public data products are available to the science community and the general public from the TRMM/GPM FTP Data Archive. Please note that you need to register to be able to access this data. Registered users can also search for GPM, partner and TRMM data, order custom subsets and set up subscriptions using our PPS Data Products Ordering Interface (STORM)

GLOBE

Global Collaboration Engine

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GLOBE (Global Collaboration Engine) is an online collaborative environment that enables land change researchers to share, compare and integrate local and regional studies with global data to assess the global relevance of their work.

IOOS®

U.S. Integrated Ocean Observing System

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U.S. IOOS is a vital tool for tracking, predicting, managing, and adapting to changes in our ocean, coastal and Great Lakes environment. A primary focus of U.S. IOOS is integration of, and expedited access to, ocean observation data for improved decision making. The Data Management and Communication (DMAC) subsystem of U.S. IOOS serves as a central mechanism for integrating all existing and projected data sources.

GEUS Dataverse

Geological Survey of Denmark and Greenland Dataverse

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An open data repository for scientists from the Geological Survey of Denmark and Greenland (GEUS) to share and preserve their research data.

DaKS

Datenrepositorium Kassel

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DaKS is the institutional repository of the University of Kassel for research data. It offers structured storage of research data alongside with descriptive metadata, long-term archiving for at least 10 years and – if requested – the publication of the dataset with a DOI.

Emporion

Forschungsdaten-Hub für die Sozial- & Wirtschaftsgeschichte

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As a research data hub for social and economic history, Emporion enables the free and standards-compliant publication of time series, historical statistical and panel data, georeferenced vector data, text mining analyses and data papers. Emporion is also open to contributions from the fields of business and environmental history and the history of technology. Emporion's supporting institutions are the DFG Priority Programme 1859 'Experience and Expectations. Historical Foundations of Economic Behavior' and the Gesellschaft für Sozial- und Wirtschaftsgeschichte in conjunction with the Staatsbibliothek zu Berlin – Preußischer Kulturbesitz.