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Found 22 result(s)

Scientific Data Repository

Data Repository. Interactive Analytics, Exploration & Visualization.

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A machine learning data repository with interactive visual analytic techniques. This project is the first to combine the notion of a data repository with real-time visual analytics for interactive data mining and exploratory analysis on the web. State-of-the-art statistical techniques are combined with real-time data visualization giving the ability for researchers to seamlessly find, explore, understand, and discover key insights in a large number of public donated data sets. This large comprehensive collection of data is useful for making significant research findings as well as benchmark data sets for a wide variety of applications and domains and includes relational, attributed, heterogeneous, streaming, spatial, and time series data as well as non-relational machine learning data. All data sets are easily downloaded into a standard consistent format. We also have built a multi-level interactive visual analytics engine that allows users to visualize and interactively explore the data in a free-flowing manner.

LacCore

National Lacustrine Core Facility

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<<<!!!<<< This record is merged into Continental Scientific Drilling Facility https://www.re3data.org/repository/r3d100012874 >>>!!!>>> LacCore curates cores and samples from continental coring and drilling expeditions around the world, and also archives metadata and contact information for cores stored at other institutions.LacCore curates cores and samples from continental coring and drilling expeditions around the world, and also archives metadata and contact information for cores stored at other institutions.

Continental Scientific Drilling Facility

formerly: NSF Facilities for Continental Scientific & Drilling & Coring

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US National Science Foundation (NSF) facility to support drilling and coring in continental locations worldwide. Drill core metadata and data, borehole survey data, geophysical site survey data, drilling metadata, software code. The CSD Facility offers repositories with samples, data, publications and reference collections from scientific drilling and coring.

Open Access Power-Grid Frequency Database

OSF repository Open Access Power-Grid Frequency Database

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This repository stores and links the openly available power-grid frequency recordings across the globe. This database is comprised of open data existent across three dimensions: - TSO data: Transmission System's Operator (TSO) recordings made public; - Research projects: Open-data database research projects; - Independent Gatherings: Industrial, private, or personal recordings that were made publicly available.

KNB Data Repository

Knowledge Network for Biocomplexity

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The KNB Data Repository is an international repository intended to facilitate ecological, environmental and earth science research in the broadest senses. For scientists, the KNB Data Repository is an efficient way to share, discover, access and interpret complex ecological, environmental, earth science, and sociological data and the software used to create and manage those data. Due to rich contextual information provided with data in the KNB, scientists are able to integrate and analyze data with less effort. The data originate from a highly-distributed set of field stations, laboratories, research sites, and individual researchers. The KNB supports rich, detailed metadata to promote data discovery as well as automated and manual integration of data into new projects. The KNB supports a rich set of modern repository services, including the ability to assign Digital Object Identifiers (DOIs) so data sets can be confidently referenced in any publication, the ability to track the versions of datasets as they evolve through time, and metadata to establish the provenance relationships between source and derived data.

Environmental Data Initiative Repository

EDI Data Portal

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We preserve environmental data for open and reproducible science, to promote synthesis across space and time, and to aid in the assessment of environmental change and its consequences.

Deep Carbon Observatory Data Portal

DCO-VIVO

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<<<!!!<<< This repository is no longer available. >>>!!!>>>The Deep Carbon Observatory (DCO) is a global community of multi-disciplinary scientists unlocking the inner secrets of Earth through investigations into life, energy, and the fundamentally unique chemistry of carbon. Deep Carbon Observatory Digital Object Registry (“DCO-VIVO”) is a centrally-managed digital object identification, object registration and metadata management service for the DCO. Digital object registration includes DCO-ID generation based on the global Handle System infrastructure and metadata collection using VIVO. Users will be able to deposit their data into the DCO Data Repository and have that data discoverable and accessible by others.

DesignSafe-CI Data Depot Repository

A Repository Infrastructure for Natural Hazards Datasets

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The DesignSafe Data Depot Repository (DDR) is the platform for curation and publication of datasets generated in the course of natural hazards research. The DDR is an open access data repository that enables data producers to safely store, share, organize, and describe research data, towards permanent publication, distribution, and impact evaluation. The DDR allows data consumers to discover, search for, access, and reuse published data in an effort to accelerate research discovery. It is a component of the DesignSafe cyberinfrastructure, which represents a comprehensive research environment that provides cloud-based tools to manage, analyze, curate, and publish critical data for research to understand the impacts of natural hazards. DesignSafe is part of the NSF-supported Natural Hazards Engineering Research Infrastructure (NHERI), and aligns with its mission to provide the natural hazards research community with open access, shared-use scholarship, education, and community resources aimed at supporting civil and social infrastructure prior to, during, and following natural disasters. It serves a broad national and international audience of natural hazard researchers (both engineers and social scientists), students, practitioners, policy makers, as well as the general public. It has been in operation since 2016, and also provides access to legacy data dating from about 2005. These legacy data were generated as part of the NSF-supported Network for Earthquake Engineering Simulation (NEES), a predecessor to NHERI. Legacy data and metadata belonging to NEES were transferred to the DDR for continuous preservation and access.

CancerModels.Org

formerly; Patients-derived tumor xenograft finder

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Patients-derived tumor xenograft (PDX) mouse models are an important oncology research platform to study tumor evolution, drug response and personalised medicine approaches. We have expanded to organoids and cell lines and are now called CancerModels.Org

GNPS: Global Natural Products Social Molecular Networking

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GNPS is a web-based mass spectrometry ecosystem that aims to be an open-access knowledge base for community-wide organization and sharing of raw, processed or identified tandem mass (MS/MS) spectrometry data. GNPS aids in identification and discovery throughout the entire life cycle of data; from initial data acquisition/analysis to post publication.

CDAWeb

Heliophysics Coordinated Data Analysis Web

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The CDAWeb data system enables improved display and coordinated analysis of multi-instrument, multimission data bases of the kind whose analysis is critical to meeting the science objectives of the ISTP program and the InterAgency Consultative Group (IACG) Solar-Terrestrial Science Initiative. The system combines the client-server user interface technology of the World Wide Web with a powerful set of customized IDL routines to leverage the data format standards (CDF) and guidelines for implementation adopted by ISTP and the IACG. The system can be used with any collection of data granules following the extended set of ISTP/IACG standards. CDAWeb is being used both to support coordinated analysis of public and proprietary data and better functional access to specific public data such as the ISTP-precursor CDAW 9 data base that is formatted to the ISTP/IACG standards. Many data sets are available through the Coordinated Data Analysis Web (CDAWeb) service and the data coverage continues to grow. These are largely, but not exclusively, magnetospheric data and nearby solar wind data of the ISTP era (1992-present) at time resolutions of approximately a minute. The CDAWeb service provides graphical browsing, data subsetting, screen listings, file creations and downloads (ASCII or CDF). Public data from current (1992-present) space physics missions (including Cluster, IMAGE, ISTP, FAST, IMP-8, SAMPEX and others). Public data from missions before 1992 (including IMP-8, ISIS1/2, Alouette2, Hawkeye and others). Public data from all current and past space physics missions. CDAWeb ist part of "Space Physics Data Facility" (https://www.re3data.org/repository/r3d100010168).

Henry A. Murray Research Archive at IQSS, Harvard University

Murray Archive

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The Henry A. Murray Research Archive is Harvard's endowed, permanent repository for quantitative and qualitative research data at the Institute for Quantitative Social Science, and provides physical storage for the entire IQSS Dataverse Network. Our collection comprises over 100 terabytes of data, audio, and video. We preserve in perpetuity all types of data of interest to the research community, including numerical, video, audio, interview notes, and other data. We accept data deposits through this web site, which is powered by our Dataverse Network software

Ag Data Commons

USDA’s Open Research Data

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Ag Data Commons provides access to a wide variety of open data relevant to agricultural research. We are a centralized repository for data already on the web, as well as for new data being published for the first time. While compliance with the U.S. Federal public access and open data directives is important, we aim to surpass them. Our goal is to foster innovative data re-use, integration, and visualization to support bigger, better science and policy.

SBGrid Data Bank

Structural Biology Data Grid

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Open access to macromolecular X-ray diffraction and MicroED datasets. The repository complements the Worldwide Protein Data Bank. SBDG also hosts reference collection of biomedical datasets contributed by members of SBGrid, Harvard and pilot communities.

HepSim

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HepSim is a public repository with Monte Carlo simulations for particle-collision experiments. It contains predictions from leading-order (LO) parton shower models, next-to-leading order (NLO) and NLO with matched parton showers. It also includes Monte Carlo events after fast ("parametric") and full (Geant4) detector simulations and event reconstruction.

EarthChem Library

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The EarthChem Library is a data repository that archives, publishes and makes accessible data and other digital content from geoscience research (analytical data, data syntheses, models, technical reports, etc.)

SARS-CoV-2 Data Hub

SARS-CoV

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This Web resource provides data and information relevant to SARS coronavirus. It includes links to the most recent sequence data and publications, to other SARS related resources, and a pre-computed alignment of genome sequences from various isolates. In order to provide free and easy access to genome and protein sequences and associated metadata from the SARS-CoV-2, we created a dedicated Severe acute respiratory syndrome coronavirus 2 data hub. You can access the Results Table on SARS-CoV-2 data hub, by pressing "RefSeq genomes", "nucleotide" or "protein" links on announcement banner located on NCBI home page, in "Find data" navigation menu or using "Up-to-date SARS-CoV-2" shortcut button in "Search by virus" form. SARS-CoV-2 sequences is part of NCBI Virus https://www.re3data.org/repository/r3d100014322

CfA Dataverses

The Astronomy Dataverse Network

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The Astronomy data repository at Harvard is currently open to all scientific data from astronomical institutions worldwide. Incorporating Astroinformatics of galaxies and quasars Dataverse. The Astronomy Dataverse is connected to the indexing services provided by the SAO/NASA Astrophysical Data Service (ADS).

NSF Arctic Data Center

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The Arctic Data Center is the primary data and software repository for the Arctic section of NSF Polar Programs. The Center helps the research community to reproducibly preserve and discover all products of NSF-funded research in the Arctic, including data, metadata, software, documents, and provenance that links these together. The repository is open to contributions from NSF Arctic investigators, and data are released under an open license (CC-BY, CC0, depending on the choice of the contributor). All science, engineering, and education research supported by the NSF Arctic research program are included, such as Natural Sciences (Geoscience, Earth Science, Oceanography, Ecology, Atmospheric Science, Biology, etc.) and Social Sciences (Archeology, Anthropology, Social Science, etc.). Key to the initiative is the partnership between NCEAS at UC Santa Barbara, DataONE, and NOAA’s NCEI, each of which bring critical capabilities to the Center. Infrastructure from the successful NSF-sponsored DataONE federation of data repositories enables data replication to NCEI, providing both offsite and institutional diversity that are critical to long term preservation.

Integrated Resource for Reproducibility in Macromolecular Crystallography

IRRMC

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The Integrated Resource for Reproducibility in Macromolecular Crystallography includes a repository system and website designed to make the raw data of protein crystallography more widely available. Our focus is on identifying, cataloging and providing the metadata related to datasets, which could be used to reprocess the original diffraction data. The intent behind this project is to make the resulting three dimensional structures more reproducible and easier to modify and improve as processing methods advance.

VecNet

Vector-Borne Disease Network

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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>

ENCODE

Encyclopedia of DNA Elements

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The ENCODE Encyclopedia organizes the most salient analysis products into annotations, and provides tools to search and visualize them. The Encyclopedia has two levels of annotations: Integrative-level annotations integrate multiple types of experimental data and ground level annotations. Ground-level annotations are derived directly from the experimental data, typically produced by uniform processing pipelines.