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Found 442 result(s)

Xenbase

Xenopus Genomics Database

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Xenbase's mission is to provide the international research community with a comprehensive, integrated and easy to use web based resource that gives access the diverse and rich genomic, expression and functional data available from Xenopus research. Xenbase also provides a critical data sharing infrastructure for many other NIH-funded projects, and is a focal point for the Xenopus community. In addition to our primary goal of supporting Xenopus researchers, Xenbase enhances the availability and visibility of Xenopus data to the broader biomedical research community.

National High Energy Physics Science Data Center

NHEPSDC

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The National High Energy Physics Science Data Center (NHEPSDC) is a repository for high-energy physics. In 2019, it was designated as a scientific data center at the national level by the Ministry of Science and Technology of China (MOST). NHEPSDC is constructed and operated by the Institute of High Energy Physics (IHEP) of the Chinese Academy of Sciences (CAS). NHEPSDC consists of a main data center in Beijing, a branch center in Guangdong-Hong Kong-Macao Greater Bay Area, and a branch center in Huairou District of Beijing. The mission of NHEPSDC is to provide the services of data collection, archiving, long-term preservation, access and sharing, software tools, and data analysis. The services of NHEPSDC are mainly for high-energy physics and related scientific research activities. The data collected can be roughly divided into the following two categories: one is the raw data from large scientific facilities, and the other is data generated from general scientific and technological projects (usually supported by government funding), hereafter referred to as generic data. More than 70 people work in NHEPSDC now, with 18 in high-energy physics, 17 in computer science, 15 in software engineering, 20 in data management and some other operation engineers. NHEPSDC is equipped with a hierarchical storage system, high-performance computing power, high bandwidth domestic and international network links, and a professional service support system. In the past three years, the average data increment is about 10 PB per year. By integrating data resources with the IT environment, a state-of-art data process platform is provided to users for scientific research, the volume of data accessed every year is more than 400 PB with more than 10 million visits.

SILVA

A comprehensive on-line resource for quality checked and aligned ribosomal RNA sequence data.

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SILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline. With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA is an ELIXIR Core Data Resource.

Prognostics Center of Excellence Data Set Repository

PCoE Datasets

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NASA's Prognostics Center of Excellence hosts the Prognostics Data Repository to provide data used in the development of prognostic algorithms, and time series of nominal to failed states. Data are donated from universities, agencies, or companies on an ongoing process.

HIstome

The Histone Infobase

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HIstome: The Histone Infobase is a database of human histones, their post-translational modifications and modifying enzymes. HIstome is a combined effort of researchers from two institutions, Advanced Center for Treatment, Research and Education in Cancer (ACTREC), Navi Mumbai and Center of Excellence in Epigenetics, Indian Institute of Science Education and Research (IISER), Pune.

studyforrest

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This project is an open invitation to anyone and everyone to participate in a decentralized effort to explore the opportunities of open science in neuroimaging. We aim to document how much (scientific) value can be generated from a data release — from the publication of scientific findings derived from this dataset, algorithms and methods evaluated on this dataset, and/or extensions of this dataset by acquisition and incorporation of new data. The project involves the processing of acoustic stimuli. In this study, the scientists have demonstrated an audiodescription of classic "Forrest Gump" to subjects, while researchers using functional magnetic resonance imaging (fMRI) have captured the brain activity of test candidates in the processing of language, music, emotions, memories and pictorial representations.In collaboration with various labs in Magdeburg we acquired and published what is probably the most comprehensive sample of brain activation patterns of natural language processing. Volunteers listened to a two-hour audio movie version of the Hollywood feature film "Forrest Gump" in a 7T MRI scanner. High-resolution brain activation patterns and physiological measurements were recorded continuously. These data have been placed into the public domain, and are freely available to the scientific community and the general public.

ASEP Repository

Repository of Czech Academy of Sciences

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The ASEP Data Repository is an institutional multidisciplinary on-line repository that stores scientific outputs - bibliographic records, full texts and datasets of the institutional authors from The Czech Academy of Sciences. The repository is hosted by Library of the Czech Academy of Sciences. Data that are stored in database are accessible in the on-line catalogue. Each dataset has its own description and metadata according to international standards.

NASA Socioeconomic Data and Applications Center

SEDAC

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SEDAC, the Socioeconomic Data and Applications Center, is one of the Distributed Active Archive Centers (DAACs) in the Earth Observing System Data and Information System (EOSDIS) of the U.S. National Aeronautics and Space Administration. SEDAC is a regular member of the World Data System and focuses on human interactions in the environment. Its mission is to develop and operate applications that support the integration of socioeconomic and Earth science data and to serve as an "Information Gateway" between the Earth and social sciences.

STOREDB

Sustaining access to Tissues and data frOm Radiobiological Experiments

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STOREDB is a platform for the archiving and sharing of primary data and outputs of all kinds, including epidemiological and experimental data, from research on the effects of radiation. It also provides a directory of bioresources and databases containing information and materials that investigators are willing to share. STORE supports the creation of a radiation research commons.

hPSCreg

human Pluripotent Stem Cell registry

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The human pluripotent stem cell registry (hPSCreg) is a public registry and data portal for human embryonic and induced pluripotent stem cell lines (hESC and hiPSC). The Registry provides comprehensive and standardized biological and legal information as well as tools to search and compare information from multiple hPSC sources and hence addresses a translational research need. To facilitate unambiguous identification over different resources, hPSCreg automatically creates a unique standardized name (identifier) for each cell line registered. In addition to biological information, hPSCreg stores extensive data about ethical standards regarding cell sourcing and conditions for application and privacy protection. hPSCreg is the first global registry that holds both, manually validated scientific and ethical information on hPSC lines, and provides access by means of a user-friendly, mobile-ready web application.

EcoCyc Database

EcoCyc E. coli Database

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EcoCyc is a scientific database for the bacterium Escherichia coli K-12 MG1655. The EcoCyc project performs literature-based curation of the entire genome, and of transcriptional regulation, transporters, and metabolic pathways.

CERIC Data Portal

CERIC Metadata Catalogue

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CERIC Data Portal allows users to consult and manage data related to experiments carried out at CERIC (Central European Research Infrastructure Consortium) partner facilities. Data made available includes scientific datasets collected during experiments, experiment proposals, samples used and publications if any. Users can search for data based on related metadata (both their own data and other peoples' public data).

ICRISAT Dataverse

International Crops Research Institute for the Semi-Arid Tropics Dataverse Network

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ICRISAT performs crop improvement research, using conventional as well as methods derived from biotechnology, on the following crops: Chickpea, Pigeonpea, Groundnut, Pearl millet,Sorghum and Small millets. ICRISAT's data repository collects, preserves and facilitates access to the datasets produced by ICRISAT researchers to all users who are interested in. Data includes Phenotypic, Genotypic, Social Science, and Spatial data, Soil and Weather.

brainlife

brainlife.io

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Brainlife promotes engagement and education in reproducible neuroscience. We do this by providing an online platform where users can publish code (Apps), Data, and make it "alive" by integragrate various HPC and cloud computing resources to run those Apps. Brainlife also provide mechanisms to publish all research assets associated with a scientific project (data and analyses) embedded in a cloud computing environment and referenced by a single digital-object-identifier (DOI). The platform is unique because of its focus on supporting scientific reproducibility beyond open code and open data, by providing fundamental smart mechanisms for what we refer to as “Open Services.”

1.2 Meter CO Survey Dataverse

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The Radio Telescope Data Center (RTDC) reduces, archives, and makes available on its web site data from SMA and the CfA Millimeter-wave Telescope. The whole-Galaxy CO survey presented in Dame et al. (2001) is a composite of 37 separate surveys. The data from most of these surveys can be accessed. Larger composites of these surveys are available separately.

AmeriFlux

Measuring carbon, water and energy flux across the Americas

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AmeriFlux is a network of PI-managed sites measuring ecosystem CO2, water, and energy fluxes in North, Central and South America. It was established to connect research on field sites representing major climate and ecological biomes, including tundra, grasslands, savanna, crops, and conifer, deciduous, and tropical forests. As a grassroots, investigator-driven network, the AmeriFlux community has tailored instrumentation to suit each unique ecosystem. This “coalition of the willing” is diverse in its interests, use of technologies and collaborative approaches. As a result, the AmeriFlux Network continually pioneers new ground.

Swedish National Data Service

SND

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Swedish National Data Service (SND) is a research data infrastructure designed to assist researchers in preserving, maintaining, and disseminating research data in a secure and sustainable manner. The SND Search function makes it easy to find, use, and cite research data from a variety of scientific disciplines. Together with an extensive network of almost 40 Swedish higher education institutions and other research organisations, SND works for increased access to research data, nationally as well as internationally.

VIPERdb

Virus Particle Explorer database

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VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration. In addition, all virus capsids are placed in a single icosahedral orientation convention, facilitating comparison between different structures. The web site includes powerful search utilities , links to other relevant databases, background information on virus capsid structure, and useful database interface tools.

The Cambridge Structural Database

CSD

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Established in 1965, the CSD is the world’s repository for small-molecule organic and metal-organic crystal structures. Containing the results of over one million x-ray and neutron diffraction analyses this unique database of accurate 3D structures has become an essential resource to scientists around the world. The CSD records bibliographic, chemical and crystallographic information for:organic molecules, metal-organic compounds whose 3D structures have been determined using X-ray diffraction, neutron diffraction. The CSD records results of: single crystal studies, powder diffraction studies which yield 3D atomic coordinate data for at least all non-H atoms. In some cases the CCDC is unable to obtain coordinates, and incomplete entries are archived to the CSD. The CSD includes crystal structure data arising from: publications in the open literature and Private Communications to the CSD (via direct data deposition). The CSD contains directly deposited data that are not available anywhere else, known as CSD Communications.

Future of Families and Child Wellbeing Study

FFCWS

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The Fragile Families and Child Wellbeing Study changed its name to The Future of Families and Child Wellbeing Study (FFCWS). Note that all documentation issued prior to January 2023 contains the study’s former name. Any further reference to FFCWS should kindly observe this name change. The Fragile Families & Child Wellbeing Study is following a cohort of nearly 5,000 children born in large U.S. cities between 1998 and 2000 (roughly three-quarters of whom were born to unmarried parents). We refer to unmarried parents and their children as “fragile families” to underscore that they are families and that they are at greater risk of breaking up and living in poverty than more traditional families. The core Study was originally designed to primarily address four questions of great interest to researchers and policy makers: (1) What are the conditions and capabilities of unmarried parents, especially fathers?; (2) What is the nature of the relationships between unmarried parents?; (3) How do children born into these families fare?; and (4) How do policies and environmental conditions affect families and children?

FactSage

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FactSage is a fully integrated Canadian thermochemical database system which couples proven software with self-consistent critically assessed thermodynamic data. It currently contains data on over 5000 chemical substances as well as solution databases representing over 1000 non-ideal multicomponent solutions (oxides, salts, sulfides, alloys, aqueous, etc.). FactSage is available for use with Windows.

UWA Profiles and Research Repository

formerly: RDO

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The UWA Profiles and Research Repository contains research publications, research datasets, theses, equipment, grants and activities created by researchers and postgraduates affiliated with the University of Western Australia (UWA). It is managed by the University Library and provides access to research datasets held at UWA. The information about each dataset has been provided by UWA research groups. Dataset metadata is harvested into Research Data Australia (RDA) https://researchdata.edu.au/.

1000 Functional Connectomes Project

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The FCP entailed the aggregation and public release (via www.nitrc.org) of over 1200 resting state fMRI (R-fMRI) datasets collected from 33 sites around the world.

GALENOS Data Repository

Global Alliance for Living Evidence on aNxiety, depressiOn and pSychosis Data Repository

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Welcome to the GALENOS Data Repository. The GALENOS Data Repository provides access to all the research data produced by the Global Alliance for Living Evidence on aNxiety, depressiOn and pSychosis (GALENOS). If you're interested in learning more about GALENOS, please visit the website at https://galenos.org.uk.

doRiNA

database of RNA interactions in post-transcriptional regulation

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doRiNA is a database of transcriptome-wide binding site data for RNA binding proteins and microRNAs