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Found 27 result(s)

Chinese Crop Germplasm Resources Information System

CGRIS

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Chinese Crop Germplasm Resources Information System provides germplasm resources and genetic information for crops including grains, fruits, vegetables, oilseeds, and fibers. The data includes crop fingerprint and DNA sequence data.

Hakai Data

Hakai Institute Data Systems

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Hakai Data stores and shares research information associated with Hakai Institute. The Hakai Institute is a scientific research institution that advances long-term research at remote locations on the coastal margin of British Columbia, Canada. Hakai Data Systems: Data Catalogue, Sensor Network, Geospatial Data, Weather Stations and Webcams, ERDDAP Data Server

Natural Resources Canada Earth Sciences Data

Ressources naturelles Canada Données Sciences de la Terre

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Natural Resources Canada (NRCan) seeks to enhance the responsible development and use of Canada’s natural resources and the competitiveness of Canada’s natural resources products. We are an established leader in science and technology in the fields of energy, forests, and minerals and metals and use our expertise in earth sciences to build and maintain an up-to-date knowledge base of our landmass.

Smithsonian National Museum of Natural History

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Museum explorers travel to ocean depths, the peaks of the Andes, Africa's Rift Valley, the rainforests of South America, and the deserts of Central Asia. Perhaps even to a field site or research institution in your own state, territory or country. In each area, researchers collect specimens: fossils, minerals, and rocks, plants and animals, tools and artworks. Collections care professionals have meticulously preserved, labeled, cataloged, and organized items of this kind for more than 150 years. Taken together, the NMNH collections form the largest, most comprehensive natural history collection in the world. By comparing items gathered in different eras and regions, scientists learn how our world has varied across time and space.

Deutsche Genbank Reben

DGR

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In order to ensure the long-term and efficient use of grape genetic resources in Germany and to guarantee their availability, the Deutsche Genbank Reben was founded in 2010 as a gene bank network. The Deutsche Genbank Reben consists of vine conservation facilities and is thus an essential instrument for securing vine genetic resources in Germany.

AceView

AceView genes

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AceView provides a curated, comprehensive and non-redundant sequence representation of all public mRNA sequences (mRNAs from GenBank or RefSeq, and single pass cDNA sequences from dbEST and Trace). These experimental cDNA sequences are first co-aligned on the genome then clustered into a minimal number of alternative transcript variants and grouped into genes. Using exhaustively and with high quality standards the available cDNA sequences evidences the beauty and complexity of mammals’ transcriptome, and the relative simplicity of the nematode and plant transcriptomes. Genes are classified according to their inferred coding potential; many presumably non-coding genes are discovered. Genes are named by Entrez Gene names when available, else by AceView gene names, stable from release to release. Alternative features (promoters, introns and exons, polyadenylation signals) and coding potential, including motifs, domains, and homologies are annotated in depth; tissues where expression has been observed are listed in order of representation; diseases, phenotypes, pathways, functions, localization or interactions are annotated by mining selected sources, in particular PubMed, GAD and Entrez Gene, and also by performing manual annotation, especially in the worm. In this way, both the anatomy and physiology of the experimentally cDNA supported human, mouse and nematode genes are thoroughly annotated.

JGI MycoCosm

MycoCosm - the fungal genomics resource

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MycoCosm, the DOE JGI’s web-based fungal genomics resource, which integrates fungal genomics data and analytical tools for fungal biologists. It provides navigation through sequenced genomes, genome analysis in context of comparative genomics and genome-centric view. MycoCosm promotes user community participation in data submission, annotation and analysis.

Hardwood Genomics Project

HWG

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This database serves forest tree scientists by providing online access to hardwood tree genomic and genetic data, including assembled reference genomes, transcriptomes, and genetic mapping information. The web site also provides access to tools for mining and visualization of these data sets, including BLAST for comparing sequences, Jbrowse for browsing genomes, Apollo for community annotation and Expression Analysis to build gene expression heatmaps.

OpenAgrar

OA

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OpenAgrar is an open access repository which publishes, stores, archives and distributes publications, publication references and research data. Its resources can be searched and used by everyone. It contains amongst others theses, reports, conference proceedings, journal articles, books, institutional documents, research datasets, videos and interviews.

AQUiLA

Senckenberg Sammlungen

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SeSam is an outstanding international collection of recent and fossil animals and plants from all over the world. It also holds an important specialized library. The really substantial data of this collection constitute the basis of every taxonomic-systematical, ecological, biogeographical or biostratigraphical fundamental research as well as every practical environmental research. Because of its historical referencings this collection is also a precious cultural treasure that generates the often expensive heavy mission of its conservation. The new system is called AQUiLA.

IonomicHub

iHUB

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<<<!!!<<<This repository is no longer available>>>!!!>>>

Vitis International Variety Catalogue

VIVC

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In 1984 the establishment of the Vitis International Variety Catalogue (VIVC) took place at the Institute for Grapevine Breeding Geilweilerhof. The concept of a database on grapevine genetic resources was supported by IBPGR (today called Bioversity) and the International Organisation of Vine and Wine (OIV). Today VIVC is an encyclopedic database with around 23000 cultivars, breeding lines and Vitis species, existing in grapevine repositories and/or described in bibliography. It is an information source for breeders, researchers, curators of germplasm repositories and interested wine enthusiasts. Besides cultivar specific passport data, SSR-marker data, comprehensive bibliography and photos are to be found.

PPBio Data Repository

Programa de Pesquisa em Biodiversidade Repositorio de Dados

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The Biodiversity Research Program (PPBio) was created in 2004 with the aims of furthering biodiversity studies in Brazil, decentralizing scientific production from already-developed academic centers, integrating research activities and disseminating results across a variety of purposes, including environmental management and education. PPBio contributes its data to the DataONE network as a member node: https://search.dataone.org/#profile/PPBIO

UCSD Signaling gateway

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

International Long Term Ecological Research

ILTER

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ILTER is a 'network of networks', a global network of research sites located in a wide array of ecosystems that can help understand environmental change across the globe. ILTER's focus is on long-term, site-based research and monitoring.

Alaska Science Center

ASC

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The USGS Alaska Region has the largest geographic extent of the seven regional units within the USGS and represents a dynamic landscape of great natural wonder. It is a transforming landscape shaped by volcanoes, earthquakes, major rivers, and glaciers and a strategic landscape of yet untapped mineral and energy resources. The Region conducts research to help inform management of the extensive national parks and wildlife refuges of the far north and the international birds, fish, and marine mammals that migrate to these lands and waters; informs national Arctic energy policy through research on the National Petroleum Reserve-Alaska and the U.S. Outer Continental Shelf; and provides science to understand, help respond to and mitigate impacts from natural hazards. This work is accomplished in part by the Region's two Science Centers headquartered in Anchorage, the Alaska Science Center and the Volcano Science Center.

Taiwan Biodiversity Information Facility

TaiBIF

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"TaiBIF" stands for Taiwan Biodiversity Information Facility. It is the Taiwan portal of GBIF, and is in charge of integrating Taiwan's biodiversity information, including lists of species and local experts, illustrations of species, introduction of endemic species and invasive species, Taiwan's terrestrial and marine organisms, biodiversity literature, geographical and environmental information, information about relevant institutions, organizations, projects, and observation spots, the Catalog of Life (a list of Taiwanese endemic species), and publications.

SOL Genomics Network

SGN

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The Sol Genomics Network (SGN) is a clade-oriented database dedicated to the biology of the Solanaceae family which includes a large number of closely related and many agronomically important species such as tomato, potato, tobacco, eggplant, pepper, and the ornamental Petunia hybrida. SGN is part of the International Solanaceae Initiative (SOL), which has the long-term goal of creating a network of resources and information to address key questions in plant adaptation and diversification

GRIN-CA Taxonomy

Plant Gene Resources of Canada: GRIN-CA Taxonomy

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GRIN-CA taxonomic data provide the structure and nomenclature for the accessions of the Canadian National Plant Germplasm System (NPGS). Many plants are included in GRIN-CA taxonomy, especially economic plants.

vegetweb

das Vegetationsportal für Deutschland

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Database and data handling portal for vegetation data from Germany.

cropPAL

Compendium of crop Proteins with Annotated Locations

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<<<!!!<<<This repository is no longer available>>>!!!>>>

Mansfeld's World Database of Agriculture and Horticultural Crops

Mansfeld-Datenbank für landwirtschaftliche und gärtnerische Kulturpflanzen

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The Mansfeld's World Database of Agriculture and Horticultural Crops is an online database. As a contribution to the project "Federal Information System on Genetic Resources" (BIG, http://www.big-flora.de/). It reflects the contents of "Mansfeld's Encyclopedia of Agricultural and Horticultural Crops" (Hanelt and IPK 2001) and contains information on 6,100 crop plant species, excluding forestry and ornamental plants. Each species entry provides nomenclature and synonymy, common names in different languages, spontaneous distribution and regions of cultivation, uses, images, references, but also the ancestral species and notes on the phylogeny, variation and history.

Senckenberg (meta) data portal

Senckenberg (meta) data catalog

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This is the (meta) data catalog of Senckenberg Nature Research Society.

Smithsonian Tropical Research Institute Logo - Panama

CTFS-Panama

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Welcome to the digital flora of Panama. You may access the taxonomic list of lianas, common trees, shrubs and palms by species name, family, or by their common names in Panama. There are for each species: a botanical description, photos, scans, drawings, and a distribution map showing its presence or absence in a series of floristic inventories and plots established by the Center for Tropical Forest Science in the Panama Canal watershed. A map of its distribution in the countries of Panama and its neighbor Costa Rica includes data from the Global Biodiversity Information Facility (GBIF) network (https://www.gbif.org/). Some families include descriptions.

Scotland's Rural College Research Data Repository

SRUC research data

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SRUC is currently on a transformational journey as we move towards becoming a unique, market-led and mission diverse 21st Century rural university, driving the future needs of a dynamic, innovative and competitive rural sector in Scotland, and working with our collaborators and partners worldwide to solve the biggest global agrifood challenges. Our researchers already carry out strategic and applied research on global and local food security issues, and actively support the translation of research results into practice. Our research ethos is strongly collaborative, and we have a long history of industrial, NGO and academic partnerships locally and internationally. As well as having longstanding disciplinary strengths in several key areas, we actively promote interdisciplinary research, especially linking natural and social sciences. We have a particular interest in research that helps inform policy, with Scottish and UK Government rural affairs and environment departments and the EU as key research clients.