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Found 241 result(s)

RRUFF Project

Database of Raman spectra, X-ray diffraction and chemistry data for minerals

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The RRUFF Project is creating a complete set of high quality spectral data from well characterized minerals and is developing the technology to share this information with the world. The collected data provides a standard for mineralogists, geoscientists, gemologists and the general public for the identification of minerals both on earth and for planetary exploration.Electron microprobe analysis is used to determine the chemistry of each mineral.

VentDB

Geochemical Database for Seafloor Hydrothermal Springs

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>>>!!!<<< The repository is no longer available. >>>!!!<<< 2021-06-17; VentDB data collections now housed in the EarthChem Library VentDB is an effort funded by the US National Science Foundation to build and operate a data management system for hydrothermal spring geochemistry that will host and serve the full range of compositional data acquired on seafloor hydrothermal vents from all tectonic settings. VentDB supports the preservation and dissemination of analytical data on hydrothermal springs and plumes. VentDB complements existing geochemical data collections such as SedDB and PetDB. VentDB can accommodate published historical data as well as legacy and new data that investigators contribute. Content of VentDB is static and will not be updated until further notice.

Scholar's Bank

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Scholars' Bank is the open access repository for the intellectual work of faculty, students and staff at the University of Oregon and partner institution collections.

Meteoritical bulletin database

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The primary function of this database is to provide authoritative information about meteorite names. The correct spelling, complete with punctuation and diacritical marks, of all known meteorites recognized by the Meteoritical Society may be found in this compilation. Official abbreviations for many meteorites are documented here as well. The database also contains status information for meteorites with provisional names, and listings for specimens of doubtful origin and pseudometeorites. A seconday purpose of this database is to provide an interface to map services for the display of geographic information about meteorites. Two are currently implemented here. If the user has installed the free NASA program World Wind, links are provided for each meteorite to zoom the program to the find location. The database also provides links to the Google Maps service for the display of find locations.

Microstructure Database

CAMS microstructure library

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>>>!!!<<< The repository is no longer available. >>>!!!<<< Here you will find a collection of atomic microstructures that have been built by the atomic modeling community. Feel free to download any of these and use them in your own scientific explorations.The focus of this cyberinfrastructure is to advance the field of atomic-scale modeling of materials by acting as a forum for disseminating new atomistic scale methodologies, educating non-experts and the next generation of computational materials scientists, and serving as a bridge between the atomistic and complementary (electronic structure, mesoscale) modeling communities.

NAWI Water DAMS

National Alliance for Water Innovation Water Data Analysis and Management System

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Water DAMS (Water Data Analysis and Management System) provides access to foundational water treatment technology data that enable researchers and decision-makers to identify and quantify opportunities for technology innovations to reduce the cost and energy intensity of desalination. It is the submission point for all data generated by research conducted by the National Alliance for Water Innovation (NAWI) and is designed to be used by the broader water research community. With publicly accessible contributions from a variety of academic and industrial partners, Water DAMS seeks to enable data discoverability, improve accessibility, and accelerate collaboration that contributes to pipe parity and innovation in water treatment technologies.

HepSim

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HepSim is a public repository with Monte Carlo simulations for particle-collision experiments. It contains predictions from leading-order (LO) parton shower models, next-to-leading order (NLO) and NLO with matched parton showers. It also includes Monte Carlo events after fast ("parametric") and full (Geant4) detector simulations and event reconstruction.

Brain Image Library

BIL

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Brain Image Library (BIL) is an NIH-funded public resource serving the neuroscience community by providing a persistent centralized repository for brain microscopy data. Data scope of the BIL archive includes whole brain microscopy image datasets and their accompanying secondary data such as neuron morphologies, targeted microscope-enabled experiments including connectivity between cells and spatial transcriptomics, and other historical collections of value to the community. The BIL Analysis Ecosystem provides an integrated computational and visualization system to explore, visualize, and access BIL data without having to download it.

Ocean Biodiversity Information System

OBIS

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OBIS strives to document the ocean's diversity, distribution and abundance of life. Created by the Census of Marine Life, OBIS is now part of the Intergovernmental Oceanographic Commission (IOC) of UNESCO, under its International Oceanographic Data and Information Exchange (IODE) programme

DOE Joint Genome Institute Genome Portal

US Department of Energy Joint Genome Institute Genome Web Portal

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The Department of Energy (DOE) Joint Genome Institute (JGI) is a national user facility with massive-scale DNA sequencing and analysis capabilities dedicated to advancing genomics for bioenergy and environmental applications. Beyond generating tens of trillions of DNA bases annually, the Institute develops and maintains data management systems and specialized analytical capabilities to manage and interpret complex genomic data sets, and to enable an expanding community of users around the world to analyze these data in different contexts over the web. The JGI Genome Portal provides a unified access point to all JGI genomic databases and analytical tools. A user can find all DOE JGI sequencing projects and their status, search for and download assemblies and annotations of sequenced genomes, and interactively explore those genomes and compare them with other sequenced microbes, fungi, plants or metagenomes using specialized systems tailored to each particular class of organisms. Databases: Genome Online Database (GOLD), Integrated Microbial Genomes (IGM), MycoCosm, Phytozome

NOAA National Centers for Environmental Information - formerly: National Climatic Data Center

NCEI

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<<<!!!<<< The demand for high-value environmental data and information has dramatically increased in recent years. To improve our ability to meet that demand, NOAA’s former three data centers—the National Climatic Data Center, the National Geophysical Data Center, and the National Oceanographic Data Center, which includes the National Coastal Data Development Center—have merged into the National Centers for Environmental Information (NCEI). >>>!!!>>> NOAA's National Climatic Data Center (NCDC) is responsible for preserving, monitoring, assessing, and providing public access to the Nation's treasure of climate and historical weather data and information.

HUGO Gene Nomenclature Committee

HGNC

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The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.

Canada's Michael Smith Genome Sciences Centre

GSC

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We are a leading international centre for genomics and bioinformatics research. Our mandate is to advance knowledge about cancer and other diseases, to improve human health through disease prevention, diagnosis and therapeutic approaches, and to realize the social and economic benefits of genomics research.

PMN

Plant Metabolic Network

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The Plant Metabolic Network (PMN) provides a broad network of plant metabolic pathway databases that contain curated information from the literature and computational analyses about the genes, enzymes, compounds, reactions, and pathways involved in primary and secondary metabolism in plants. The PMN currently houses one multi-species reference database called PlantCyc and 22 species/taxon-specific databases.

FungiDB

The Fungal and Oomycete Genomics Resource

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FungiDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for the kingdom Fungi. FungiDB was first released in early 2011 as a collaborative project between EuPathDB and the group of Jason Stajich (University of California, Riverside). At the end of 2015, FungiDB was integrated into the EuPathDB bioinformatic resource center. FungiDB integrates whole genome sequence and annotation and also includes experimental and environmental isolate sequence data. The database includes comparative genomics, analysis of gene expression, and supplemental bioinformatics analyses and a web interface for data-mining.

Site Survey Data Bank

SSDB

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The Site Survey Data Bank (SSDB) is a repository for site survey data submitted in support of International Ocean Discovery Program (IODP) proposals and expeditions. SSDB serves different roles for different sets of users.

Center for International Earth Science Information Network

CIESIN

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CIESIN is an interdisciplinary research and data center that provides access to a wide range of global data, associated documentation, and visualization and analysis tools to improve understanding of human interactions in the environment.

Purdue University Research Repository

PURR

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The Purdue University Research Repository (PURR) provides a virtual research environment and data publication and archiving platform for its campuses. Also supports the publication and online execution of software tools with DataCite DOIs.

NCAR UCAR Climate Data Guide

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Search and access 201 data sets covering the Atmosphere, Ocean, Land and more. Explore climate indices, reanalyses and satellite data and understand their application to climate model metrics. This is the only data portal that combines data discovery, metadata, figures and world-class expertise on the strengths, limitations and applications of climate data.

CU Scholar

University of Colorado Boulder's institutional repository

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CU Scholar is an open access institutional repository supporting the research and teaching mission of the University of Colorado Boulder. It is intended to serve as a platform for preserving the research activities of members of the CU Boulder community and for providing public access to that research. CU Scholar is maintained by the University Libraries.

OHSU Digital Commons

OHSU Digital Collections

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OHSU Digital Commons is a repository for the scholarly and creative work of Oregon Health & Science University. Developed by the OHSU Library, Digital Commons provides the university community with a platform for publishing and accessing content produced by students, faculty, and staff. OHSU Digital Commons documents the history and growth of the university, as well as current progress in education, research, and health care.

SPT Galaxy Cluster Followup Dataverse

South Pole Telescope Galaxy Cluster Followup Dataverse

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Dataverse to host followup observations of galaxy clusters identified in South Pole Telescope SZ Surveys. This includes: 1) GMOS spectroscopy of low to moderate redshift galaxy clusters taken as a part of NOAO Large Survey Program 11A-0034 (PI: Christopher Stubbs).

Magnetics Information Consortium

MagIC

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The Magnetics Information Consortium (MagIC) improves research capacity in the Earth and Ocean sciences by maintaining an open community digital data archive for rock magnetic, geomagnetic, archeomagnetic (archaeomagnetic) and paleomagnetic (palaeomagnetic) data. Different parts of the website allow users access to archive, search, visualize, and download these data. MagIC supports the international rock magnetism, geomagnetism, archeomagnetism (archaeomagnetism), and paleomagnetism (palaeomagnetism) research and endeavors to bring data out of private archives, making them accessible to all and (re-)useable for new, creative, collaborative scientific and educational activities. The data in MagIC is used for many types of studies including tectonic plate reconstructions, geomagnetic field models, paleomagnetic field reversal studies, magnetohydrodynamical studies of the Earth's core, magnetostratigraphy, and archeology. MagIC is a domain-specific data repository and directed by PIs who are both producers and consumers of rock, geo, and paleomagnetic data. Funded by NSF since 2003, MagIC forms a major part of https://earthref.org which integrates four independent cyber-initiatives rooted in various parts of the Earth, Ocean and Life sciences and education.

International Mouse Strain Resource

IMSR

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The IMSR is a searchable online database of mouse strains, stocks, and mutant ES cell lines available worldwide, including inbred, mutant, and genetically engineered strains. The goal of the IMSR is to assist the international scientific community in locating and obtaining mouse resources for research. Note that the data content found in the IMSR is as supplied by strain repository holders. For each strain or cell line listed in the IMSR, users can obtain information about: Where that resource is available (Repository Site); What state(s) the resource is available as (e.g. live, cryopreserved embryo or germplasm, ES cells); Links to descriptive information about a strain or ES cell line; Links to mutant alleles carried by a strain or ES cell line; Links for ordering a strain or ES cell line from a Repository; Links for contacting the Repository to send a query

NCBI Datasets

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NCBI Datasets is a continually evolving platform designed to provide easy and intuitive access to NCBI’s sequence data and metadata. NCBI Datasets is part of the NIH Comparative Genomics Resource (CGR). CGR facilitates reliable comparative genomics analyses for all eukaryotic organisms through an NCBI Toolkit and community collaboration.