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Found 294 result(s)
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The Natural Environment Research Council's Data Repository for Atmospheric Science and Earth Observation. The Centre for Environmental Data Analysis (CEDA) serves the environmental science community through three data centres, data analysis environments, and participation in a host of relevant research projects.
We aim to support environmental science, further environmental data archival practices, and develop and deploy new technologies to enhance access to data. Additionally we provide services to aid large scale data analysis.
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The Open Data Platform supports the 'Open Data Policy' of the Government of Telangana. The portal will be the central repository of all the datasets of the Government of Telangana that should be in the public domain. The portal will house datasets form the various departments and organizations of the Government of Telangana.
The portal could be used by a variety of stakeholders and will enhance transparency in the working of the government apart from triggering innovative solutions to various problems.
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BRENDA is the main collection of enzyme functional data available to the scientific community worldwide. The enzymes are classified according to the Enzyme Commission list of enzymes. It is available free of charge for via the internet (http://www.brenda-enzymes.org/) and as an in-house database for commercial users (requests to our distributor Biobase). The enzymes are classified according to the Enzyme Commission list of enzymes. Some 5000 "different" enzymes are covered. Frequently enzymes with very different properties are included under the same EC number. BRENDA includes biochemical and molecular information on classification, nomenclature, reaction, specificity, functional parameters, occurrence, enzyme structure, application, engineering, stability, disease, isolation, and preparation. The database also provides additional information on ligands, which function as natural or in vitro substrates/products, inhibitors, activating compounds, cofactors, bound metals, and other attributes.
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The projects include airborne, ground-based and ocean measurements, social science surveys, satellite data use, modelling studies and value-added product development. Therefore, the BAOBAB data portal enables to access a great amount and a large variety of data: - 250 local observation datasets, that have been collected by operational networks since 1850, long term monitoring research networks and intensive scientific campaigns; - 1350 outputs of a socio-economics questionnaire; - 60 operational satellite products and several research products; - 10 output sets of meteorological and ocean operational models and 15 of research simulations. Data documentation complies with metadata international standards, and data are delivered into standard formats. The data request interface takes full advantage of the database relational structure and enables users to elaborate multicriteria requests (period, area, property…).
Subject(s)
- Basic Biological and Medical Research
- Cell Biology
- General Genetics
- Structural Biology
- Medicine
- Molecular Chemistry
- Optics, Quantum Optics and Physics of Atoms, Molecules and Plasmas
- Geochemistry, Mineralogy and Crystallography
- Biology
- Life Sciences
- Medicine
- Chemistry
- Natural Sciences
- Physics
- Geosciences (including Geography)
- Structural Biology
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The Protein Data Bank (PDB) is an archive of experimentally determined three-dimensional structures of biological macromolecules that serves a global community of researchers, educators, and students. The data contained in the archive include atomic coordinates, crystallographic structure factors and NMR experimental data. Aside from coordinates, each deposition also includes the names of molecules, primary and secondary structure information, sequence database references, where appropriate, and ligand and biological assembly information, details about data collection and structure solution, and bibliographic citations. The Worldwide Protein Data Bank (wwPDB) consists of organizations that act as deposition, data processing and distribution centers for PDB data. Members are: RCSB PDB (USA), PDBe (Europe) and PDBj (Japan), and BMRB (USA). The wwPDB's mission is to maintain a single PDB archive of macromolecular structural data that is freely and publicly available to the global community.
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The Internet Archive includes texts, audio, moving images, software, and archived web pages.
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Addgene archives and distributes plasmids for researchers around the globe. They are working with thousands of laboratories to assemble a high-quality library of published plasmids for use in research and discovery. By linking plasmids with articles, scientists can always find data related to the materials they request.
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FLYCHK provides a capability to generate atomic level populations and charge state distributions for low-Z to mid-Z elements under NLTE conditions.
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BioLINCC is the Biologic Specimen and Data Repository Coordinating Center. The center coordinates data and biospecimens from NHLBI-funded studies that are available for use in other approved studies. The center also creates teaching data sets from NHLBI-funded studies for use in training future biostatisticians.
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The SAR Data Center has a large data archive of Synthetic Aperture Radar (SAR) from a variety of sensors available at no cost. Much of the SAR data in the ASF SDC archive is limited in distribution to the scientific research community and U.S. Government Agencies. In accordance with the Memoranda of Understanding (MOU) between the relevant flight agencies (CSA, ESA, JAXA) and the U.S. State Department, the ASF SDC does not distribute SAR data for commercial use.
The research community can access the data (ERS-1, ERS-2, JERS-1, RADARSAT-1, and ALOS PALSAR) via a brief proposal process.
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The EELS database is a public interactive consultable web repository of outer-shell and inner-shell excitation spectra from Electron Energy Loss Spectroscopy and X-Ray experiments, which forms a reference catalog of fine structures for materials. Each spectrum is available with a full set of recording parameters providing a complete overview of the working conditions. The database must also be seen as a research tool for EEL spectroscopists, theoreticians, students, or private firms and a central “location” for the growing EELS community.
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The GeoPRISMS Data Portal was established in early 2011 to serve the NSF-funded GeoPRISMS program as a dedicated data system to facilitate open and timely exchange of data in support of the interdisciplinary science goals of the program. GeoPrisms Data Portal focuses upon the coordinated, interdisciplinary investigation of the continental margins through two initiatives: the Subduction Cycles and Deformation (SCD) and Rift Initiation and Evolution (RIE). In order to address the fundamental scientific questions, each initiative is associated with Primary Sites to address a wide range of field, experimental and theoretical studies spanning broad spatial and temporal scales.
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The MGDS Academic Seismic Portal at Lamont-Doherty Earth Observatory (ASP-LDEO), now part of the IEDA Data Facility, was initiated in 2003 to preserve and provide open access to multi-channel seismic (MCS) and single channel seismic (SCS) field data collected for academic research supported by the US National Science Foundation. Multi-channel data are primarily from the marine seismic vessels operated by Lamont-Doherty Earth Observatory of Columbia University. Modern single channel seismic data from other vessels including the R/V Palmer and USCG Healy, as well as data from portable seismic systems, are also served.
The development of the Academic Seismic Portal has focused on the need to recover high value MCS data from older surveys as well as to establish sustainable procedures for preservation of data from modern programs. During the final two years of R/V Ewing operations, procedures were established for routine transfer of MCS data along with navigation and acquisition parameters, and other needed documentation to the ASP. Transfer of seismic data and acquisition information is now routine for the National Marine Seismic Facility, the R/V Marcus G. Langseth, which began science operations in February 2008. Data are documented and incorporated into the data system with full access restrictions protecting the scientists' rights to exclusive access during the proprietary hold period. Submission of data to the ASP helps ensure that NSF requirements for data sharing as outlined in the NSF OCE Data Policy are satisfied.
Data from the Academic Seismic Portal at UTIG has been migrated to LDEO. As we continue to verify the accuracy and completeness of this data, there may be temporary issues with some seismic metadata and web services.
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SoyBase is a professionally curated repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. SoyBase includes annotated "Williams 82" genomic sequence and associated data mining tools. The repository maintains controlled vocabularies for soybean growth, development, and traits that are linked to more general plant ontologies.
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The California Coastal Atlas is an experiment in the creation of a new information resource for the description, analysis and understanding of natural and human processes affecting the coast of California.
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MedEffect Canada’s Adverse Reaction Online Database contains information on suspected adverse reaction reports related to marketed health products that were submitted to Health Canada by consumers and health professionals, who submit reports voluntarily, as well as by Market Authorization Holders (manufacturers and distributors), who are required to submit reports according to the Next link will take you to another Web site Food and Drugs Regulations.
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SESAR, the System for Earth Sample Registration, is a global registry for specimens (rocks, sediments, minerals, fossils, fluids, gas) and related sampling features from our natural environment. SESAR's objective is to overcome the problem of ambiguous sample naming in the Earth Sciences.
SESAR maintains a database of sample records that are contributed by its users. Each sample that is registered with SESAR is assigned an International Geo Sample Number IGSN to ensure its global unique identification.
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ArrayExpress is one of the major international repositories for high-throughput functional genomics data from both microarray and high-throughput sequencing studies, many of which are supported by peer-reviewed publications. Data sets are submitted directly to ArrayExpress and curated by a team of specialist biological curators. In the past (until 2018) datasets from the NCBI Gene Expression Omnibus database were imported on a weekly basis. Data is collected to MIAME and MINSEQE standards.
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ZFIN serves as the zebrafish model organism database. The long term goals for ZFIN are a) to be the community database resource for the laboratory use of zebrafish, b) to develop and support integrated zebrafish genetic, genomic and developmental information, c) to maintain the definitive reference data sets of zebrafish research information, d) to link this information extensively to corresponding data in other model organism and human databases, e) to facilitate the use of zebrafish as a model for human biology and f) to serve the needs of the research community.
ZIRC is the Zebrafish International Resource Center, an independent NIH-funded facility providing a wide range of zebrafish lines, probes and health services. ZFIN works closely with ZIRC to connect our genetic data with available probes and fish lines.
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The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination.
Current members accepting submissions are:
The PRIDE PRoteomics IDEntifications database at the European Bioinformatics Institute focusing mainly on shotgun mass spectrometry proteomics data
PeptideAtlas/PASSEL focusing on SRM/MRM datasets.
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The database includes world-wide cosmic-ray neutron observations (pressure-corrected 1 hour counts) since 1953. The date are opened in two formats; one is 4096-byte "longformat" data and the other one is 80-byte "cardformat" data. Since the "cardformat" data are prepared only for quick check of data, the "longformat" data, which include information for data usage (constant, factors, etc), should be used for research works. PS files (compressed) of yearly plots are also available.
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The main goal of the ECCAD project is to provide scientific and policy users with datasets of surface emissions of atmospheric compounds, and ancillary data, i.e. data required to estimate or quantify surface emissions.
The supply of ancillary data - such as maps of population density, maps of fires spots, burnt areas, land cover - could help improve and encourage the development of new emissions datasets.
ECCAD offers:
Access to global and regional emission inventories and ancillary data, in a standardized format
Quick visualization of emission and ancillary data
Rationalization of the use of input data in algorithms or emission models
Analysis and comparison of emissions datasets and ancillary data
Tools for the evaluation of emissions and ancillary data
ECCAD is a dynamical and interactive database, providing the most up to date datasets including data used within ongoing projects. Users are welcome to add their own datasets, or have their regional masks included in order to use ECCAD tools.
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MassBank of North America (MoNA) is a metadata-centric, auto-curating repository designed for efficient storage and querying of mass spectral records. It intends to serve as a the framework for a centralized, collaborative database of metabolite mass spectra, metadata and associated compounds. MoNA currently contains over 200,000 mass spectral records from experimental and in-silico libraries as well as from user contributions.
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The Connectome Coordination Facility (CCF) houses and distributes public research data for a series of studies that focus on the connections within the human brain. These are known as Human Connectome Projects. he Connectome Coordination Facility (CCF) was chartered to help coordinate myriad research projects, harmonize their data, and facilitate the dissemination of results.
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The Pennsieve platform is a cloud-based scientific data management platform focused on integrating complex datasets, fostering collaboration and publishing scientific data according to all FAIR principles of data sharing.
The platform is developed to enable individual labs, consortiums, or inter-institutional projects to manage, share and curate data in a secure cloud-based environment and to integrate complex metadata associated with scientific files into a high-quality interconnected data ecosystem. The platform is used as the backend for a number of public repositories including the NIH SPARC Portal and Pennsieve Discover repositories. It supports flexible metadata schemas and a large number of scientific file-formats and modalities.
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
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To the extent possible under law,
re3data.org
has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
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Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-04-29
