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Found 160 result(s)
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Welcome to Smithsonian Open Access, where you can download, share, and reuse millions of the Smithsonian’s images—right now, without asking. With new platforms and tools, you have easier access to nearly 3 million 2D and 3D digital items from our collections—with many more to come. This includes images and data from across the Smithsonian’s 19 museums, nine research centers, libraries, archives, and the National Zoo.
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The Department of Energy Systems Biology Knowledgebase (KBase) is a software and data platform designed to meet the grand challenge of systems biology: predicting and designing biological function. KBase integrates data and tools in a unified graphical interface so users do not need to access them from numerous sources or learn multiple systems in order to create and run sophisticated systems biology workflows. Users can perform large-scale analyses and combine multiple lines of evidence to model plant and microbial physiology and community dynamics.
KBase is the first large-scale bioinformatics system that enables users to upload their own data, analyze it (along with collaborator and public data), build increasingly realistic models, and share and publish their workflows and conclusions. KBase aims to provide a knowledgebase: an integrated environment where knowledge and insights are created and multiplied.
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The Network for the Detection of Atmospheric Composition Change (NDACC), a major contributor to the worldwide atmospheric research effort, consists of a set of globally distributed research stations providing consistent, standardized, long-term measurements of atmospheric trace gases, particles, spectral UV radiation reaching the Earth's surface, and physical parameters, centered around the following priorities.
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The Sequence Read Archive stores the raw sequencing data from such sequencing platforms as the Roche 454 GS System, the Illumina Genome Analyzer, the Applied Biosystems SOLiD System, the Helicos Heliscope, and the Complete Genomics. It archives the sequencing data associated with RNA-Seq, ChIP-Seq, Genomic and Transcriptomic assemblies, and 16S ribosomal RNA data.
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The National Park Service Gaseous Pollutant Monitoring Program Database provides gaseous air pollutant and meteorological data as *.csv files. Queries allow filtering by location of ozone, wind speed, wind direction, ambient temperature, relative humidity, solar radiation, wetness data.
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GWAS Central (previously the Human Genome Variation database of Genotype-to-Phenotype information) is a database of summary level findings from genetic association studies, both large and small. We actively gather datasets from public domain projects, and encourage direct data submission from the community.
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The Conserved Domain Database is a resource for the annotation of functional units in proteins. Its collection of domain models includes a set curated by NCBI, which utilizes 3D structure to provide insights into sequence/structure/function relationships
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The National Air Pollution Surveillance (NAPS) Program provides accurate and long-term air quality data of a uniform standard across Canada. The NAPS Network has a Canada-Wide database of criteria air contaminants from the early 1970s to the present for designated NAPS sites, as well as provincial, territorial and other sites. Trace contaminants are also monitored at several stations in the network and analyzed by the laboratory at River Road.
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The repository is no longer available. <<<!!!<<< Visit IRIS at EPA: https://www.epa.gov/iris >>>!!!>>>
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The repository is no longer available. <<<!!!<<< CPDB is retired >>>!!!>>>
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The Human Ageing Genomic Resources (HAGR) is a collection of databases and tools designed to help researchers study the genetics of human ageing using modern approaches such as functional genomics, network analyses, systems biology and evolutionary analyses.
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The repository is no longer available.
<<<!!!<<< CCRIS information is migrated to PubChem (https://www.ncbi.nlm.nih.gov/pcsubstance?term=%22Chemical%20Carcinogenesis%20Research%20Information%20System%20(CCRIS)%22%5BSourceName%5D%20AND%20hasnohold%5Bfilt%5D) Help for CCRIS Users in PubChem: https://www.nlm.nih.gov/toxnet/Accessing_CCRIS_Content_from_PubChem.html or PDF: https://www.nlm.nih.gov/toxnet/Accessing_CCRIS_Content_from_PubChem.pdf. >>>!!!>>>
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The NCEP/NCAR Reanalysis Project is a joint project between the National Centers for Environmental Prediction (NCEP, formerly "NMC") and the National Center for Atmospheric Research (NCAR). The goal of this joint effort is to produce new atmospheric analyses using historical data (1948 onwards) and as well to produce analyses of the current atmospheric state (Climate Data Assimilation System, CDAS).
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The Center for Remote Sensing of Ice Sheets radar data repository containing data products from the Greenland Ice Sheet, the Antarctic Ice Sheet, sea ice, and land snow.
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<<<!!!<<< The demand for high-value environmental data and information has dramatically increased in recent years. To improve our ability to meet that demand, NOAA’s former three data centers—the National Climatic Data Center, the National Geophysical Data Center, and the National Oceanographic Data Center, which includes the National Coastal Data Development Center—have merged into the National Centers for Environmental Information (NCEI). >>>!!!>>>
The National Coastal Data Development Center, a division of the National Oceanographic Data Center, is dedicated to building the long-term coastal data record to support environmental prediction, scientific analysis, and formulation of public policy.
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- Bioinformatics and Theoretical Biology
- Plant Genetics
- Plant Breeding
- Biological Process Engineering
- Biomaterials
- Basic Biological and Medical Research
- Biology
- Life Sciences
- Plant Sciences
- Agriculture, Forestry, Horticulture and Veterinary Medicine
- Agriculture, Forestry, Horticulture and Veterinary Medicine
- Process Engineering, Technical Chemistry
- Thermal Engineering/Process Engineering
- Engineering Sciences
- Materials Science
- Materials Science and Engineering
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The Nottingham Arabidopsis Stock Centre (NASC) provides seed and information resources to Europe researchers.
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TPA is a database that contains sequences built from the existing primary sequence data in GenBank. TPA records are retrieved through the Nucleotide Database and feature information on the sequence, how it was cataloged, and proper way to cite the sequence information.
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The ERS mission is to inform and enhance public and private decision making on economic and policy issues related to agriculture, food, the environment, and rural development.
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<<<!!!<<< USHIK was archived because some of the metadata are maintained by other sites and there is no need for duplication.
The USHIK metadata registry was a neutral repository of metadata from an authoritative source used to promote interoperability and reuse of data. The registry did not attempt to change the metadata content but rather provided a structured way to view data for the technical or casual user.
Complete information see: https://www.ahrq.gov/data/ushik.html >>>!!!>>>
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The Coriolis Data Centre handles operational oceanography measurements made in situ, complementing the measurement of the ocean surface made using instruments aboard satellites.
This work is realised through the establishment of permanent networks with data collected by ships or autonomous systems that are either fixed or drifting.
This data can be used to construct a snapshot of water mass structure and current intensity.
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<<<!!!<<< NDAR is a part of the National Institute of Mental Health Data Archive (NDA) https://www.re3data.org/repository/r3d100012653 >>>!!!>>>
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With the creation of the Metabolomics Data Repository managed by Data Repository and Coordination Center (DRCC), the NIH acknowledges the importance of data sharing for metabolomics. Metabolomics represents the systematic study of low molecular weight molecules found in a biological sample, providing a "snapshot" of the current and actual state of the cell or organism at a specific point in time. Thus, the metabolome represents the functional activity of biological systems. As with other ‘omics’, metabolites are conserved across animals, plants and microbial species, facilitating the extrapolation of research findings in laboratory animals to humans. Common technologies for measuring the metabolome include mass spectrometry (MS) and nuclear magnetic resonance spectroscopy (NMR), which can measure hundreds to thousands of unique chemical entities.
Data sharing in metabolomics will include primary raw data and the biological and analytical meta-data necessary to interpret these data. Through cooperation between investigators, metabolomics laboratories and data coordinating centers, these data sets should provide a rich resource for the research community to enhance preclinical, clinical and translational research.
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NAGRP Blast Center aggregates various sequence databases and makes them accessible via its website.
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NCBI PopSet collects DNA sequences to analyze the ways that populations are related by evolution. Such sequences indicate if populations originate from different members of the same species or from organisms of different species entirely.
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IRSA is chartered to curate the calibrated science products from NASAs infrared and sub-millimeter missions, including five major large-area/all-sky surveys. IRSA exploits a re-useable architecture to deploy cost-effective archives for customers, including: the Spitzer Space Telescope; the 2MASS and IRAS all-sky surveys; and multi-mission datasets such as COSMOS, WISE and Planck mission
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-06-18
