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Found 30 result(s)
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Chempound is a new generation repository architecture based on RDF, semantic dictionaries and linked data. It has been developed to hold any type of chemical object expressible in CML and is exemplified by crystallographic experiments and computational chemistry calculations. In both examples, the repository can hold >50k entries which can be searched by SPARQL endpoints and pre-indexing of key fields. The Chempound architecture is general and adaptable to other fields of data-rich science.
The Chempound software is hosted at http://bitbucket.org/chempound and is available under the Apache License, Version 2.0
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The Bach portal is a database for researchers and practical musicians interested in Johann Sebastian Bach and the whole Bach family. It contains detailed, fully searchable findings from research into Bach and high-resolution scans of works and sources.
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"The Digital Mozart Edition (DME) aims at making accessible the oeuvre of Wolfgang Amadé Mozart (1756–1791) in digital formats. Access is free of charge for everybody."
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STRING is a database of known and predicted protein interactions.
The interactions include direct (physical) and indirect (functional) associations; they are derived from four sources:
- Genomic Context
- High-throughput Experiments
- (Conserved) Coexpression
- Previous Knowledge
STRING quantitatively integrates interaction data from these sources for a large number of organisms, and transfers information between these organisms where applicable.
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<<<!!!<<< The repository OAGR is no longer available. >>>!!!>>>
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Data Publication Server Forschungszentrum Juelich is a web server for providing large data sets to the general public. It's main application is publishing data belonging to scientific publications.
Subject(s)
- Atmospheric Science and Oceanography
- Geophysics
- Hydrogeology, Hydrology, Limnology, Urban Water Management, Water Chemistry, Integrated Water Resources Management
- Agriculture, Forestry, Horticulture and Veterinary Medicine
- Geosciences (including Geography)
- Natural Sciences
- Geophysics and Geodesy
- Water Research
- Life Sciences
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The India Environment Portal provides open access to information about environmental and developmental issues in India. The Portal aggregates and presents data from research institutions, government bodies, NGOs, universities, the mass media, and experts across various issues of environmental management.
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"IndExs" is a database comprising information on exsiccatae (=exsiccatal series) with titles, abbreviations, bibliography and provides a unique and persistent Exsiccata ID for each series. Exsiccatae are defined as "published, uniform, numbered sets of preserved specimens distributed with printed labels" (Pfister 1985). Please note that there are two similar latin terms: "exsiccata, ae" is feminine and used for a set of dried specimens as defined above, whereas the term "exsiccatum, i" is neutral and used for dried specimens in general. If available, images of one or more examplary labels are added to give layout information.
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UNITE provides unified way how you delimit, identify, communicate and work with DNA based Species Hypotheses (SH).
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SILVA is a comprehensive, quality-controlled web resource for up-to-date aligned ribosomal RNA (rRNA) gene sequences from the Bacteria, Archaea and Eukaryota domains alongside supplementary online services. In addition to data products, SILVA provides various online tools such as alignment and classification, phylogenetic tree calculation and viewer, probe/primer matching, and an amplicon analysis pipeline. With every full release a curated guide tree is provided that contains the latest taxonomy and nomenclature based on multiple references. SILVA is an ELIXIR Core Data Resource.
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The European Environment Agency (EEA) is an agency of the European Union. Our task is to provide sound, independent information on the environment. We are a major information source for those involved in developing, adopting, implementing and evaluating environmental policy, and also the general public. Currently, the EEA has 33 member countries.
EEA's mandate is: To help the Community and member countries make informed decisions about improving the environment, integrating environmental considerations into economic policies and moving towards sustainability
To coordinate the European environment information and observation network (Eionet)
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ERDDAP is a data server that gives you a simple, consistent way to download subsets of gridded and tabular scientific datasets in common file formats and make graphs and maps. This particular ERDDAP installation has oceanographic data (for example, data from satellites and buoys).
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FPC Mapping data files from species that have been fingerprinted at Canada's Michael Smith Genome Sciences Centre (BCGSC).
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<<<!!!<<< This repository is no longer available. >>>!!!>>>
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<<<!!!<<<no longer avialable>>>!!!>>>
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LIAS is a global information system for Lichenized and Non-Lichenized Ascomycetes. It includes several interoperable data repositories.
In recent years, the two core components ‘LIAS names’ and ‘LIAS light’ have been much enlarged.
LIAS light is storing phenotypic trait data. They includes > 10,700 descriptions (about 2/3 of all known lichen species), each with up to 75 descriptors comprising 2,000 traits (descriptor states and values), including 800 secondary metabolites. 500 traits may have biological functions and more than 1,000 may have phylogenetic relevance. LIAS is thus one of the most comprehensive trait databases in organismal biology. The online interactive identification key for more than 10,700 lichens is powered by the Java applet NaviKey and has been translated into 19 languages (besides English) in cooperation with lichenologists worldwide.
The component ‘LIAS names’ is a platform for managing taxonomic names and classifications with currently >50,000 names, including the c. 12,000 accepted species and recognized synonyms.
The LIAS portal contents, interfaces, and databases run on servers of the IT Center of the Bavarian Natural History Collections and are maintained there. 'LIAS names' and ‘LIAS light’ also deliver content data to the Catalogue of Life, acting as the Global Species Database (GSD) for lichens. LIAS gtm is a database for visualising the geographic distribution of lichen traits. LIAS is powered by the Diversity Workbench database framework with several interfaces for data management and publication. The LIAS long-term project was initiated in the early 1990s and has since been continued with funding from the DFG, the BMBF, and the EU.
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Covalent DNA modifications have been found in numerous organisms and more are continually being discovered and characterized, as detection methods improve. Many of these modifications can affect the conformation of the DNA double helix, often resulting in downstream effects upon transcription factor binding. Some of these modifications have been demonstrated to be stable, while others are viewed as merely transient. DNAmod catalogues information on known DNA modifications, of which the well-known 5-methylcytosine is only one. It aims to profile modifications' properties, building upon data contained within the Chemical Entities of Biological Interest (ChEBI) database. It also provides literature citations and includes curated annotations on mapping techniques and natural occurrence information.
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DEEMY is collecting descriptive data on ectomycorrhizae, including extant character descriptions and definitions. Ectomycorrhizae are mutualistic structures formed by fungi and the roots of forest trees. They are predominantly found in the temperate and boreal climate zones but occur also in humid tropic regions, as well as in soils of poor nutrition. Without mycorrhizae, trees would not be able to take up water and minerals. Ectomycorrhizae show a wide range of anatomical diversity which represents their possible function in tree nutrition and ecology. Their anatomical data, in general, allow a quick determination and provide at the same time ecologically important information about possible functions for tree nutrition.
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Epidat provides the inventory, documentation, editions and presentation of epigraphical collections.
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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>
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DisGeNET is a discovery platform containing one of the largest publicly available collections of genes and variants associated to human diseases. DisGeNET integrates data from expert curated repositories, GWAS catalogues, animal models and the scientific literature. DisGeNET data are homogeneously annotated with controlled vocabularies and community-driven ontologies. Additionally, several original metrics are provided to assist the prioritization of genotype–phenotype relationships.
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LITTERBASE summarises results from 2,046 scientific studies in understandable global maps and figures and opens scientific knowledge on marine litter to the public.
In LITTERBASE, we compile information from 2,046 scientific publications on marine litter in a comprehensive data base. This forms the basis of continuously updated maps and figures for policy makers, authorities, scientists, media and the general public on the global amount, distribution and composition of marine litter and its impacts on aquatic life. The portal conveys a broad, fact-based understanding of this environmental problem.
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Founded in 1556, the SLUB today houses a variety of collections. The Library collects most comprehensively media from and about Saxony (Saxonica) and – commissioned by the German Research Foundation – literature on contemporary art, photography, industrial design and commercial art, and history of technology. In addition, also the music and the map collection have a special rank. These and other valuable materials are summarized in the special collections department. Finally the Deutsche Fotothek as one of the most important photo archives in Germany has a prominent role.
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<<<!!!<<< This repository is no longer available. >>>!!!>>>
see https://beta.ukdataservice.ac.uk/datacatalogue/studies/study?id=7021#!/details and
https://ota.bodleian.ox.ac.uk/repository/xmlui/discover?query=germanc&submit=Search&filtertype_1=title&filter_relational_operator_1=contains&filter_1=&query=germanc
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OASIS-3 is the latest release in the Open Access Series of Imaging Studies (OASIS) that aimed at making neuroimaging datasets freely available to the scientific community. By compiling and freely distributing this multi-modal dataset, we hope to facilitate future discoveries in basic and clinical neuroscience. Previously released data for OASIS-Cross-sectional (Marcus et al, 2007) and OASIS-Longitudinal (Marcus et al, 2010) have been utilized for hypothesis driven data analyses, development of neuroanatomical atlases, and development of segmentation algorithms. OASIS-3 is a longitudinal neuroimaging, clinical, cognitive, and biomarker dataset for normal aging and Alzheimer’s Disease.
The OASIS datasets hosted by central.xnat.org provide the community with open access to a significant database of neuroimaging and processed imaging data across a broad demographic, cognitive, and genetic spectrum an easily accessible platform for use in neuroimaging, clinical, and cognitive research on normal aging and cognitive decline. All data is available via www.oasis-brains.org.
- Current projects
- EOSC FAIR-IMPACT
- re3data COREF
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To the extent possible under law,
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the database entries of re3data.org.
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Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
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- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2024-06-24
