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Found 442 result(s)

openICPSR

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A service of the Inter-university Consortium for Political and Social Research (ICPSR), openICPSR is a self-publishing repository for social, behavioral, and health sciences research data. openICPSR is particularly well-suited for the deposit of replication data sets for researchers who need to publish their raw data associated with a journal article so that other researchers can replicate their findings.

PlasmoDB

Plasmodium Genomics Resource

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PlasmoDB is a genome database for the genus Plasmodium, a set of single-celled eukaryotic pathogens that cause human and animal diseases, including malaria.

PiroplasmaDB

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A genome database for the genus Piroplasma. PiroplasmaDB is a member of pathogen-databases that are housed under the NIAID-funded EuPathDB Bioinformatics Resource Center (BRC) umbrella.

CancerModels.Org

formerly; Patients-derived tumor xenograft finder

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Patients-derived tumor xenograft (PDX) mouse models are an important oncology research platform to study tumor evolution, drug response and personalised medicine approaches. We have expanded to organoids and cell lines and are now called CancerModels.Org

Earth System Research Laboratory - Global Monitoring Laboratory

ESRL GML

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Earth System Research Laboratory (ESRL) Global Monitoring Division (GMD) provides data relating to climate change forces and models, ozone depletion and rehabilitation, and baseline air quality. Data are freely available so the public, policy makers, and scientists stay current with long-term atmospheric trends.

Tropospheric Emission Spectrometer

TES

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TES is the first satellite instrument to provide simultaneous concentrations of carbon monoxide, ozone, water vapor and methane throughout Earth’s lower atmosphere. This lower atmosphere (the troposphere) is situated between the surface and the height at which aircraft fly, and is an important part of the atmosphere that we often impact with our activities.

Open Data Commons for Spinal Cord Injury

ODC-SCI

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A community platform to Share Data, Publish Data with a DOI, and get Citations. Advancing Spinal Cord Injury research through sharing of data from basic and clinical research.

AmoebaDB

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AmoebaDB belongs to the EuPathDB family of databases and is an integrated genomic and functional genomic database for Entamoeba and Acanthamoeba parasites. In its first iteration (released in early 2010), AmoebaDB contains the genomes of three Entamoeba species (see below). AmoebaDB integrates whole genome sequence and annotation and will rapidly expand to include experimental data and environmental isolate sequences provided by community researchers . The database includes supplemental bioinformatics analyses and a web interface for data-mining.

ToxoDB

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ToxoDB is a genome database for the genus Toxoplasma, a set of single-celled eukaryotic pathogens that cause human and animal diseases, including toxoplasmosis.

GloPAD

Global Performing Arts Database

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GloPAD is a multimedia, multilingual, web-accessible database containing digital images, texts, video clips, sound recordings, and complex media objects (such as 3-D images) related to the performing arts from around the world. GloPAD (Global Performing Arts Database) records include authoritative, detailed, multilingual descriptions of digital images, texts, video clips, sound recordings, and complex media objects related to the performing arts around the world, plus information about related pieces, productions, performers, and creators. GloPAC is an international organization of institutions and individuals committed to using innovative digital technologies to create easily accessible, multimedia, and multilingual information resources for the study and preservation of the performing arts.

FlyReactome

a curated knowledgebase of drosophila melanogaster pathways

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<<<!!!<<< This repository is no longer available. This record is out dated >>>!!!>>>- eir fields, maintained by the FlyReactome staff.

Bioconductor

Open Source Software for Bioinformatics

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Bioconductor provides tools for the analysis and comprehension of high-throughput genomic data. Bioconductor uses the R statistical programming language, and is open source and open development. It has two releases each year, and an active user community. Bioconductor is also available as an AMI (Amazon Machine Image) and a series of Docker images.

UC San Diego Library Digital Collections

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The UC San Diego Library Digital Collections website gathers two categories of content managed by the Library: library collections (including digitized versions of selected collections covering topics such as art, film, music, history and anthropology) and research data collections (including research data generated by UC San Diego researchers).

PDS

The Planetary Data System

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The PDS archives and distributes scientific data from NASA planetary missions, astronomical observations, and laboratory measurements. The PDS is sponsored by NASA's Science Mission Directorate. Its purpose is to ensure the long-term usability of NASA data and to stimulate advanced research

Environmental Dataset Gateway

EPA's official open data catalog

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<<<!!!<<< This repository is no longer available. The Environmental Dataset Gateway (EDG) has provided access to EPA's Open Data resources. Metadata records contributed by EPA Regions, Program Offices, and Research Laboratories that link to geospatial and non-geospatial resources (e.g., data, Web services, or applications) are now discoverable through Data.gov. https://www.re3data.org/repository/r3d100010078 >>>!!!>>>

Seamount Catalog

SC

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The Seamount Catalog is a digital archive for bathymetric seamount maps from all the oceans that can be viewed and downloaded in various formats. This catalog contains morphological data, sample information, related grid and multibeam data files, as well as user-contributed files that all can be downloaded.

Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer

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The information in the Mitelman Database of Chromosome Aberrations and Gene Fusions in Cancer relates cytogenetic changes and their genomic consequences, in particular gene fusions, to tumor characteristics, based either on individual cases or associations. All the data have been manually culled from the literature by Felix Mitelman in collaboration with Bertil Johansson and Fredrik Mertens.

Speech and Language Data Repository

SLDR

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>>>>>!!!<<<<< As of 01/12/2015, deposit of data on SLDR website will be suspended to allow the public opening of Ortolang platform https://www.ortolang.fr/#/market/home .>>>>>!!!<<<<<

modENCODE

Model Organism ENCyclopedia of DNA Elements

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<<<!!!<<< As of 2023, support to maintain the www.modencode.org and intermine.modencode.org sites have been retired following the end of funding. To access data from the modENCODE project, or for questions regarding the data they make available, please visit these databases: Fly data: FlyBase: ModENCODE data at FlyBase: https://wiki.flybase.org/wiki/FlyBase:ModENCODE_data_at_FlyBase FlyBase: https://www.re3data.org/repository/r3d100010591 Worm data: WormBase https://www.re3data.org/repository/r3d100010424 Data, including modENCODE and modERN project data, is also available at the ENCODE Portal: https://www.re3data.org/repository/r3d100013051 (search metadata and view datasets for Drosophila and Caenorhabditis https://www.encodeproject.org/matrix/?type=Experiment&control_type!=*&status=released&replicates.library.biosample.donor.organism.scientific_name=Drosophila+melanogaster&replicates.library.biosample.donor.organism.scientific_name=Caenorhabditis+elegans&replicates.library.biosample.donor.organism.scientific_name=Drosophila+pseudoobscura&replicates.library.biosample.donor.organism.scientific_name=Drosophila+mojavensis). >>>!!!>>>

ABCD Data Repository

Adolescent Brain Cognitive Development

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The ABCD Data Repository houses all data generated by the Adolescent Brain Cognitive Development (ABCD) Study. The ABCD Study is supported by NIH partners (the National Institute on Drug Abuse, the National Institute on Alcohol Abuse and Alcoholism, the National Cancer Institute, the Eunice Kennedy Shriver National Institute of Child Health and Human Development, the National Institute of Mental Health, the National Institute on Minority Health and Health Disparities, the National Institute of Neurological Disorders and Stroke, the NIH Office of Behavioral and Social Sciences Research, and the NIH Office of Research on Women’s Health), as well as the Centers for Disease Control and Prevention – Division of Adolescent and School Health. This repository will store data generated by ABCD investigators, serve as a collaborative platform for harmonizing these data, and share those data with qualified researchers.

Antarctic Glaciological Data Center at NSIDC

AGDC

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<<<!!!<<< This repository is no longer available. >>>!!!>>> In 2016, NSIDC partnered with the United States Antarctic Program - Data Center (USAP-DC) at Columbia University to consolidate NSF glaciology data into a central USAP Project Catalog and a Data Repository for research datasets derived from these projects. From 2016 to 2018, the AGDC data sets were transferred to USAP-DC. All AGDC data previously archived with NSIDC are now available via the USAP-DC https://www.re3data.org/repository/r3d100010660.

MHKDR

Marine and Hydrokinetic Data Repository

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The MHKDR is the repository for all data collected using funds from the Water Power Technologies Office (WPTO) of the U.S. Department of Energy (DOE). It was established to receive, manage, and make available all water power relevant data generated from projects funded by the DOE Water Power Technologies Office. This includes data from WPTO-funded projects associated with any portion of the water power project life-cycle (exploration, development, operation), as well as data produced by WPTO-funded research.

CDAWeb

Heliophysics Coordinated Data Analysis Web

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The CDAWeb data system enables improved display and coordinated analysis of multi-instrument, multimission data bases of the kind whose analysis is critical to meeting the science objectives of the ISTP program and the InterAgency Consultative Group (IACG) Solar-Terrestrial Science Initiative. The system combines the client-server user interface technology of the World Wide Web with a powerful set of customized IDL routines to leverage the data format standards (CDF) and guidelines for implementation adopted by ISTP and the IACG. The system can be used with any collection of data granules following the extended set of ISTP/IACG standards. CDAWeb is being used both to support coordinated analysis of public and proprietary data and better functional access to specific public data such as the ISTP-precursor CDAW 9 data base that is formatted to the ISTP/IACG standards. Many data sets are available through the Coordinated Data Analysis Web (CDAWeb) service and the data coverage continues to grow. These are largely, but not exclusively, magnetospheric data and nearby solar wind data of the ISTP era (1992-present) at time resolutions of approximately a minute. The CDAWeb service provides graphical browsing, data subsetting, screen listings, file creations and downloads (ASCII or CDF). Public data from current (1992-present) space physics missions (including Cluster, IMAGE, ISTP, FAST, IMP-8, SAMPEX and others). Public data from missions before 1992 (including IMP-8, ISIS1/2, Alouette2, Hawkeye and others). Public data from all current and past space physics missions. CDAWeb ist part of "Space Physics Data Facility" (https://www.re3data.org/repository/r3d100010168).

Nuclear Receptor Signaling Atlas

NURSA Hub

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>>> !!! the repository is offline !!! <<< More information see: https://dknet.org/about/NURSA_Archive All NURSA-biocurated transcriptomic datasets have been preserved for data mining in SPP through an enhanced and expanded version of Transcriptomine named Ominer. To access these datasets, dkNET provides users with the information of 527 transcriptomic datasets that contain data related to nuclear receptors and nuclear receptor coregulators in the NURSA Datasets table view and redirects users to the current SPP dataset page. Once users find the specific dataset of research interest, users can download the dataset by clicking DOI and then clicking the Download Dataset button at the Signaling Pathways Project webpage. See https://www.re3data.org/repository/r3d100013650

USGODAE Argo GDAC Data Browser

US Global Ocean Data Assimilation Experiment Argo Global Data Assembly Center Data Browser

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!!! <<< the repository is offline, please use: https://www.re3data.org/repository/r3d100011650 >>> !!! The USGODAE Project consists of United States academic, government and military researchers working to improve assimilative ocean modeling as part of the International GODAE Project. GODAE hopes to develop a global system of observations, communications, modeling and assimilation, that will deliver regular, comprehensive information on the state of the oceans, in a way that will promote and engender wide utility and availability of this resource for maximum benefit to the community. The USGODAE Argo GDAC is currently operational, serving daily data from the following national DACs: Australia (CSIRO), Canada (MEDS), China (2: CSIO and NMDIS), France (Coriolis), India (INCOIS), Japan (JMA), Korea (2: KMA and Kordi), UK (BODC), and US (AOML).