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Found 21 result(s)
Database and knowledgebase of authenticated microbial genomics data with full data provenance to physical materials held within American Type Culture Collection's (ATCC) biorepository and culture collections. Data includes whole genome sequencing data for bacterial, viral and fungal strains at ATCC, their genome assemblies, metadata, drug susceptibility data, and more. All data is freely available for non-commercial research use only (RUO) applications via the web portal interface or via a REST-API. The goal is to provide the research community with provenance information and authentication between the biological source materials and reference genome assemblies derived from them.
The Plant Metabolic Network (PMN) provides a broad network of plant metabolic pathway databases that contain curated information from the literature and computational analyses about the genes, enzymes, compounds, reactions, and pathways involved in primary and secondary metabolism in plants. The PMN currently houses one multi-species reference database called PlantCyc and 22 species/taxon-specific databases.
VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the web. VertNet is a tool designed to help people discover, capture, and publish biodiversity data. It is also the core of a collaboration between hundreds of biocollections that contribute biodiversity data and work together to improve it. VertNet is an engine for training current and future professionals to use and build upon best practices in data quality, curation, research, and data publishing. Yet, VertNet is still the aggregate of all of the information that it mobilizes. To us, VertNet is all of these things and more.
The NCBI database of Genotypes and Phenotypes archives and distributes the results of studies that have investigated the interaction of genotype and phenotype, including genome-wide association studies, medical sequencing, molecular diagnostic assays, and association between genotype and non-clinical traits. The database provides summaries of studies, the contents of measured variables, and original study document text. dbGaP provides two types of access for users, open and controlled. Through the controlled access, users may access individual-level data such as phenotypic data tables and genotypes.
ASAP (a systematic annotation package for community analysis of genomes) is a relational database and web interface developed to store, update and distribute genome sequence data and gene expression data collected by or in collaboration with researchers at the University of Wisconsin - Madison. ASAP was designed to facilitate ongoing community annotation of genomes and to grow with genome projects as they move from the preliminary data stage through post-sequencing functional analysis. The ASAP database includes multiple genome sequences at various stages of analysis, and gene expression data from preliminary experiments.
CalSurv is a comprehensive information on West Nile virus, plague, malaria, Lyme disease, trench fever and other vectorborne diseases in California — where they are, where they’ve been, where they may be headed and what new diseases may be emerging.The CalSurv Web site serves as a portal or a single interface to all surveillance-related Web sites in California.
CDC.gov is the Centers for Disease Control and Prevention primary online communication channel. CDC.gov provides users with credible, reliable health information on Data and Statistics, Diseases and Conditions, Emergencies and Disasters, Environmental Health, Healthy Living, Injury, Violence and Safety,Life Stages and Populations, Travelers' Health, Workplace Safety and Health
NKN is now Research Computing and Data Services (RCDS)! We provide data management support for UI researchers and their regional, national, and international collaborators. This support keeps researchers at the cutting-edge of science and increases our institution's competitiveness for external research grants. Quality data and metadata developed in research projects and curated by RCDS (formerly NKN) is a valuable, long-term asset upon which to develop and build new research and science.
The NCEAS Data Repository contains information about the research data sets collected and collated as part of NCEAS' funded activities. Information in the NCEAS Data Repository is concurrently available through the Knowledge Network for Biocomplexity (KNB), an international data repository. A number of the data sets were synthesized from multiple data sources that originated from the efforts of many contributors, while others originated from a single. Datasets can be found at KNB repository https://knb.ecoinformatics.org/data , creator=NCEAS
Earthdata powered by EOSDIS (Earth Observing System Data and Information System) is a key core capability in NASA’s Earth Science Data Systems Program. It provides end-to-end capabilities for managing NASA’s Earth science data from various sources – satellites, aircraft, field measurements, and various other programs. EOSDIS uses the metadata and service discovery tool Earthdata Search https://search.earthdata.nasa.gov/search. The capabilities of EOSDIS constituting the EOSDIS Science Operations are managed by NASA's Earth Science Data and Information System (ESDIS) Project. The capabilities include: generation of higher level (Level 1-4) science data products for several satellite missions; archiving and distribution of data products from Earth observation satellite missions, as well as aircraft and field measurement campaigns. The EOSDIS science operations are performed within a distributed system of many interconnected nodes - Science Investigator-led Processing Systems (SIPS), and distributed, discipline-specific, Earth science Distributed Active Archive Centers (DAACs) with specific responsibilities for production, archiving, and distribution of Earth science data products. The DAACs serve a large and diverse user community by providing capabilities to search and access science data products and specialized services.
RUresearch Data Portal is a subset of RUcore (Rutgers University Community Repository), provides a platform for Rutgers researchers to share their research data and supplementary resources with the global scholarly community. This data portal leverages all the capabilities of RUcore with additional tools and services specific to research data. It provides data in different clusters (research-genre) with excellent search facility; such as experimental data, multivariate data, discrete data, continuous data, time series data, etc. However it facilitates individual research portals that include the Video Mosaic Collaborative (VMC), an NSF-funded collection of mathematics education videos for Teaching and Research. Its' mission is to maintain the significant intellectual property of Rutgers University; thereby intended to provide open access and the greatest possible impact for digital data collections in a responsible manner to promote research and learning.
Chapman University Digital Commons is an open access digital repository and publication platform designed to collect, store, index, and provide access to the scholarly and creative output of Chapman University faculty, students, staff, and affiliates. In it are faculty research papers and books, data sets, outstanding student work, audiovisual materials, images, special collections, and more, all created by members of or owned by Chapman University. The datasets are listed in a separate collection.
>>>!!!<<< caArray Retirement Announcement >>>!!!<<< The National Cancer Institute (NCI) Center for Biomedical Informatics and Information Technology (CBIIT) instance of the caArray database was retired on March 31st, 2015. All publicly-accessible caArray data and annotations will be archived and will remain available via FTP download https://wiki.nci.nih.gov/x/UYHeDQ and is also available at GEO http://www.ncbi.nlm.nih.gov/geo/ . >>>!!!<<< While NCI will not be able to provide technical support for the caArray software after the retirement, the source code is available on GitHub https://github.com/NCIP/caarray , and we encourage continued community development. Molecular Analysis of Brain Neoplasia (Rembrandt fine-00037) gene expression data has been loaded into ArrayExpress: http://www.ebi.ac.uk/arrayexpress/experiments/E-MTAB-3073 >>>!!!<<< caArray is an open-source, web and programmatically accessible microarray data management system that supports the annotation of microarray data using MAGE-TAB and web-based forms. Data and annotations may be kept private to the owner, shared with user-defined collaboration groups, or made public. The NCI instance of caArray hosts many cancer-related public datasets available for download.
ASTM International, formerly known as the American Society for Testing and Materials (ASTM), is a globally recognized leader in the development and delivery of international voluntary consensus standards. Today, some 12,000 ASTM standards are used around the world to improve product quality, enhance safety, facilitate market access and trade, and build consumer confidence.
The Yeast Resource Center provides access to data about mass spectrometry, yeast two-hybrid arrays, deconvolution florescence microscopy, protein structure prediction and computational biology. These services are provided to further the goal of a complete understanding of the chemical interactions required for the maintenance and faithful reproduction of a living cell. The observation that the fundamental biological processes of yeast are conserved among all eukaryotes ensures that this knowledge will shape and advance our understanding of living systems.