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Found 377 result(s)

ProteomeXchange

PX

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The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination. Current members accepting submissions are: The PRIDE PRoteomics IDEntifications database at the European Bioinformatics Institute focusing mainly on shotgun mass spectrometry proteomics data PeptideAtlas/PASSEL focusing on SRM/MRM datasets.

ECCAD - the GEIA database

Emissions of atmospheric Compounds & Compilation of Ancillary Data

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The main goal of the ECCAD project is to provide scientific and policy users with datasets of surface emissions of atmospheric compounds, and ancillary data, i.e. data required to estimate or quantify surface emissions. The supply of ancillary data - such as maps of population density, maps of fires spots, burnt areas, land cover - could help improve and encourage the development of new emissions datasets. ECCAD offers: Access to global and regional emission inventories and ancillary data, in a standardized format Quick visualization of emission and ancillary data Rationalization of the use of input data in algorithms or emission models Analysis and comparison of emissions datasets and ancillary data Tools for the evaluation of emissions and ancillary data ECCAD is a dynamical and interactive database, providing the most up to date datasets including data used within ongoing projects. Users are welcome to add their own datasets, or have their regional masks included in order to use ECCAD tools.

Carbohydrate-Active enZYmes Database

CAZy

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CAZy is a specialist database dedicated to the display and analysis of genomic, structural and biochemical information on Carbohydrate-Active Enzymes (CAZymes). CAZy data are accessible either by browsing sequence-based families or by browsing the content of genomes in carbohydrate-active enzymes. New genomes are added regularly shortly after they appear in the daily releases of GenBank. New families are created based on published evidence for the activity of at least one member of the family and all families are regularly updated, both in content and in description.

PUB Data Publications

PUB Datenpublikationen

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PUB represents the central publication data service of Bielefeld University. It serves Bielefeld academics to easily create and administer their personal publication lists and make them available on the web. The University Bielefeld encourages scientists to publish their research data on research data archives. The publications are intended to take account into personal and business related interests and carried out unter mandatory license conditions. The Bielefeld University supports faculties and scientific institutions to link their offerings with global data archives. The university-wide service " PUB - Publications at Bielefeld University " allows the primary publication of research data.

Open Calgary

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The City of Calgary’s Open Data Catalogue provides public access to information and data managed by The City. The Open Data Catalogue contains hundreds of datasets which are available in multiple file formats and can be downloaded for free. The data may be used for any purpose subject to the Open Data Catalogue Terms of Use. By providing public access to City data, we are not only promoting transparency in government, but also innovation within our community.

The City of Saint John Open Data

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Find open data for the City of Saint John via their Open Data catalogue.

ExAC Browser

Exome Aggregation Consortium Browser

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<<<!!!<<< The ExAC browser is no longer available ExAC data is available in the gnomAD browser https://gnomad.broadinstitute.org/ or for download https://gnomad.broadinstitute.org/downloads#exac-variants. >>>!!!>>>

InnateDB

A Knowlede Resource for Innate Immunity Interactions & Pathways

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InnateDB is a publicly available database of the genes, proteins, experimentally-verified interactions and signaling pathways involved in the innate immune response of humans, mice and bovines to microbial infection. The database captures an improved coverage of the innate immunity interactome by integrating known interactions and pathways from major public databases together with manually-curated data into a centralised resource. The database can be mined as a knowledgebase or used with our integrated bioinformatics and visualization tools for the systems level analysis of the innate immune response.

Canadensys repository

Database of Vascular Plants of Canada

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Biological collections are replete with taxonomic, geographic, temporal, numerical, and historical information. This information is crucial for understanding and properly managing biodiversity and ecosystems, but is often difficult to access. Canadensys, operated from the Université de Montréal Biodiversity Centre, is a Canada-wide effort to unlock the biodiversity information held in biological collections.

Minnesota Population Center

MPC

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The Minnesota Population Center (MPC) is a University-wide interdisciplinary cooperative for demographic research. The MPC serves more than 80 faculty members and research scientists from eight colleges and institutes at the University of Minnesota. As a leading developer and disseminator of demographic data, we also serve a broader audience of some 50,000 demographic researchers worldwide. MPC is a DataONE member node: https://search.dataone.org/#profile/US_MPC

World Glacier Monitoring Service

WGMS

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The World Glacier Monitoring Service (WGMS) collects standardized observations on changes in mass, volume, area and length of glaciers with time (glacier fluctuations), as well as statistical information on the distribution of perennial surface ice in space (glacier inventories). Such glacier fluctuation and inventory data are high priority key variables in climate system monitoring; they form a basis for hydrological modelling with respect to possible effects of atmospheric warming, and provide fundamental information in glaciology, glacial geomorphology and quaternary geology. The highest information density is found for the Alps and Scandinavia, where long and uninterrupted records are available. As a contribution to the Global Terrestrial/Climate Observing System (GTOS, GCOS), the Division of Early Warning and Assessment and the Global Environment Outlook of UNEP, and the International Hydrological Programme of UNESCO, the WGMS collects and publishes worldwide standardized glacier data.

eHOMD

expanded Human Oral Microbiome Database

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The goal of creating the Human Oral Microbiome Database (HOMD) is to provide the scientific community with comprehensive information o­n the approximately 700 prokaryote species that are present in the human oral cavity. Approximately 49% are officially named, 17% unnamed (but cultivated) and 34% are known o­nly as uncultivated phylotypes. The HOMD presents a provisional naming scheme for the currently unnamed species so that strain, clone, and probe data from any laboratory can be directly linked to a stably named reference scheme. The HOMD links sequence data with phenotypic, phylogenetic, clinical, and bibliographic information. Genome sequences for oral bacteria determined as part of this project, the Human Microbiome Project, and other sequencing projects are being added to the HOMD as they become available. Genomes for 315 oral taxa (46% of taxa o­n HOMD) are currently available o­n HOMD. The HOMD site offers easy to use tools for viewing all publically available oral bacterial genomes.

Primate Cell Type Database

PCTD

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Primate Cell Type Database, a publicly available web-accessible archive of intracellular patch clamp recordings and highly detailed three-dimensional digital reconstructions of neuronal morphology.

Das Kristallstrukturdepot

Kristallstrukturdepot

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More than 25 years ago FIZ Karlsruhe started depositing crystal structure data linked to publications in German journals. At that time it was irrelevant whether the deposited structures were organic or inorganic. Today FIZ Karlsruhe is responsible for storing the structure data of inorganic compounds. Organic structure data are stored by the Cambridge Crystallographic Data Center. Nowadays many publishers inform their authors that in parallel to a publication in a scientific journal, crystal structure data should also be stored in the Crystal Structure Depot at FIZ Karlsruhe. A CSD number will be assigned to the data for later reference in the publication. The data can then be ordered from the Crystal Structure Depot at FIZ Karlsruhe.

KNB Data Repository

Knowledge Network for Biocomplexity

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The KNB Data Repository is an international repository intended to facilitate ecological, environmental and earth science research in the broadest senses. For scientists, the KNB Data Repository is an efficient way to share, discover, access and interpret complex ecological, environmental, earth science, and sociological data and the software used to create and manage those data. Due to rich contextual information provided with data in the KNB, scientists are able to integrate and analyze data with less effort. The data originate from a highly-distributed set of field stations, laboratories, research sites, and individual researchers. The KNB supports rich, detailed metadata to promote data discovery as well as automated and manual integration of data into new projects. The KNB supports a rich set of modern repository services, including the ability to assign Digital Object Identifiers (DOIs) so data sets can be confidently referenced in any publication, the ability to track the versions of datasets as they evolve through time, and metadata to establish the provenance relationships between source and derived data.

CMO Editionen und Quellen-Katalog

Corpus Musicae Ottomanicae Editionen und Quellen-Katalog

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CMO is a long-term project for the critical edition of Near Eastern music manuscripts. The project focusing on manuscripts of Ottoman music written in Hampartsum and staff notations during the nineteenth century, is funded by the German Research Foundation (DFG). This platform provides access to the online versions of both music and text editions, as well as the source catalogue, which is a comprehensive database of printed, manuscript and online sources.

Dataverse UNIMI

Dataverse Università degli Studi di Milano

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Dataverse UNIMI is the institutional data repository of the University of Milan. The service aims at facilitating data discovery, data sharing, and reuse, as required by funding institutions (eg. European Commission). Datasets published in the archive have a set of metadata that ensure proper description and discoverability.

MicroScope

Microbial Genome Annotation & Analysis Platform

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The MicroScope platform is an informatics infrastructure dedicated to the annotation and comparative analysis of microbial genomes and metagenomes.

IBICT Cariniana Dataverse Network

Instituto Brasileiro de Informação em Ciência e Tecnologia Cariniana Dataverse Network

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IBICT is providing a research data repository that takes care of long-term preservation and archiving of good practices, so that researchers can share, maintain control and get recognition for your data. The repository supports research data sharing with Quote persistent data, allowing them to be played. The Dataverse is a large open data repository of all disciplines, created by the Institute for Quantitative Social Science at Harvard University. IBICT the Dataverse repository provides a means available for free to deposit and find specific data sets stored by employees of the institutions participating in the Cariniana network.

HPDE.io

Heliophysics Data Environment Registry

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Provides quick, uncluttered access to information about Heliophysics research data that have been described with SPASE resource descriptions.

Phaidra Universität Wien

Permanent Hosting, Archiving and Indexing of Digital Resources and Assets

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Phaidra Universität Wien, is the innovative whole-university digital asset management system with long-term archiving functions, offers the possibility to archive valuable data university-wide with permanent security and systematic input, offering multilingual access using metadata (data about data), thus providing worldwide availability around the clock. As a constant data pool for administration, research and teaching, resources can be used flexibly, where continual citability allows the exact location and retrieval of prepared digital objects.

National Earth Observation Data Center

国家对地观测科学数据中心

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The National Earth Observation Science Data Center, whose predecessor was the National Integrated Earth Observation Data Sharing Platform, has formed a sustainable, cross-agency, one-stop data sharing service capability after years of construction, and it is also the main channel for international exchange of remote sensing data in China. In the future, it will manage and coordinate scientific data resources in the field of earth observation on behalf of the country, and build a national-level earth observation big data infrastructure. Coordinate various industry data centers, scientific research institutions and enterprises in the field of Earth observation in China to cooperate in building a national strategic, fundamental, scientific, internationalized, and independent and controllable scientific big data environment in the field of Earth observation. On the basis of the already formed data ecology and cooperation mechanism, data sharing services, and international data cooperation, we will actively expand to the whole life cycle management of data and carry out data management work such as the collection, management, analysis and mining, and sharing services of national scientific data resources for Earth observation. Form a unified technical support system and data sharing service environment for Earth observation data in China. Maintain and enhance its international influence and become a domestic and international first-class scientific data center for Earth observation!

Nuclear Data Services

NDS

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Nuclear Data Services contains atomic, molecular and nuclear data sets for the development and maintenance of nuclear technologies. It includes energy-dependent reaction probabilities (cross sections), the energy and angular distributions of reaction products for many combinations of target and projectile, and the atomic and nuclear properties of excited states, and their radioactive decay data. Their main concern is providing data required to design a modern nuclear reactor for electricity production. Approximately 11.5 million nuclear data points have been measured and compiled into computerized form.

InGeoCloudS

Inspired GEOdata CLOUD Services

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<<<!!!<<< The repository is no longer available. Information about the project see https://www.pole-inside.fr/en/page/ingeoclouds or https://www.eurogeosurveys.org/projects/ingeoclouds/>>>!!!>>>

Sequence Read Archive

SRA

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The Sequence Read Archive stores the raw sequencing data from such sequencing platforms as the Roche 454 GS System, the Illumina Genome Analyzer, the Applied Biosystems SOLiD System, the Helicos Heliscope, and the Complete Genomics. It archives the sequencing data associated with RNA-Seq, ChIP-Seq, Genomic and Transcriptomic assemblies, and 16S ribosomal RNA data.