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Competence Centre IULA-UPF-CC CLARIN manages, disseminates and facilitates this catalogue, which provides access to reference information on the use of language technology projects and studies in different disciplines, especially with regard to Humanities and Social Sciences. The Catalog relates information that is organized by Áreas, (disciplines and research topics), Projects (of research that use or have used language technologies), Tasks (that make the tools), Tools (of language technology), Documentation (articles regarding the tools and how they are used) and resources such as Corpora (collections of annotated texts) and Lexica (collections of words for different uses).
ARCHE (A Resource Centre for the HumanitiEs) is a service aimed at offering stable and persistent hosting as well as dissemination of digital research data and resources for the Austrian humanities community. ARCHE welcomes data from all humanities fields. ARCHE is the successor of the Language Resources Portal (LRP) and acts as Austria’s connection point to the European network of CLARIN Centres for language resources.
The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.
CLARIN is a European Research Infrastructure for the Humanities and Social Sciences, focusing on language resources (data and tools). It is being implemented and constantly improved at leading institutions in a large and growing number of European countries, aiming at improving Europe's multi-linguality competence. CLARIN provides several services, such as access to language data and tools to analyze data, and offers to deposit research data, as well as direct access to knowledge about relevant topics in relation to (research on and with) language resources. The main tool is the 'Virtual Language Observatory' providing metadata and access to the different national CLARIN centers and their data.
The European Bioinformatics Institute (EBI) has a long-standing mission to collect, organise and make available databases for biomolecular science. It makes available a collection of databases along with tools to search, download and analyse their content. These databases include DNA and protein sequences and structures, genome annotation, gene expression information, molecular interactions and pathways. Connected to these are linking and descriptive data resources such as protein motifs, ontologies and many others. In many of these efforts, the EBI is a European node in global data-sharing agreements involving, for example, the USA and Japan.
SOHO, the Solar & Heliospheric Observatory, is a project of international collaboration between ESA and NASA to study the Sun from its deep core to the outer corona and the solar wind. SOHO was launched on December 2, 1995. The SOHO spacecraft was built in Europe by an industry team led by prime contractor Matra Marconi Space (now EADS Astrium) under overall management by ESA. The twelve instruments on board SOHO were provided by European and American scientists.
Copernicus is a European system for monitoring the Earth. Copernicus consists of a complex set of systems which collect data from multiple sources: earth observation satellites and in situ sensors such as ground stations, airborne and sea-borne sensors. It processes these data and provides users with reliable and up-to-date information through a set of services related to environmental and security issues. The services address six thematic areas: land monitoring, marine monitoring, atmosphere monitoring, climate change, emergency management and security. The main users of Copernicus services are policymakers and public authorities who need the information to develop environmental legislation and policies or to take critical decisions in the event of an emergency, such as a natural disaster or a humanitarian crisis. Based on the Copernicus services and on the data collected through the Sentinels and the contributing missions , many value-added services can be tailored to specific public or commercial needs, resulting in new business opportunities. In fact, several economic studies have already demonstrated a huge potential for job creation, innovation and growth.
Lithuania became a full member of CLARIN ERIC in January of 2015 and soon CLARIN-LT consortium was founded by three partner universities: Vytautas Magnus University, Kaunas Technology University and Vilnius University. The main goal of the consortium is to become a CLARIN B centre, which will be able to serve language users in Lithuania and Europe for storing and accessing language resources.
EnsemblPlants is a genome-centric portal for plant species. Ensembl Plants is developed in coordination with other plant genomics and bioinformatics groups via the EBI's role in the transPLANT consortium.
VectorBase provides data on arthropod vectors of human pathogens. Sequence data, gene expression data, images, population data, and insecticide resistance data for arthropod vectors are available for download. VectorBase also offers genome browser, gene expression and microarray repository, and BLAST searches for all VectorBase genomes. VectorBase Genomes include Aedes aegypti, Anopheles gambiae, Culex quinquefasciatus, Ixodes scapularis, Pediculus humanus, Rhodnius prolixus. VectorBase is one the Bioinformatics Resource Centers (BRC) projects which is funded by National Institute of Allergy and Infectious Diseases (NAID).
ANPERSANA is the digital library of IKER (UMR 5478), a research centre specialized in Basque language and texts. The online library platform receives and disseminates primary sources of data issued from research in Basque language and culture. As of today, two corpora of documents have been published. The first one, is a collection of private letters written in an 18th century variety of Basque, documented in and transcribed to modern standard Basque. The discovery of the collection, named Le Dauphin, has enabled the emerging of new questions about the history and sociology of writing in the domain of minority languages, not only in France, but also among the whole Atlantic Arc. The second of the two corpora is a selection of sound recordings about monodic chant in the Basque Country. The documents were collected as part of a PhD thesis research work that took place between 2003 and 2012. It's a total of 50 hours of interviews with francophone and bascophone cultural representatives carried out at either their workplace of the informers or in public areas. ANPERSANA is bundled with an advanced search engine. The documents have been indexed and geo-localized on an interactive map. The platform is engaged with open access and all the resources can be uploaded freely under the different Creative Commons (CC) licenses.
The Language Archive Cologne (LAC) is a research data repository for the linguistics and all humanities disciplines working with audiovisual data. The archive forms a cluster of the Data Center for Humanities in cooperation with the Institute of Linguistics of the University of Cologne. The LAC is an archive for language resources, which is freely available via a web-based access. In addition, concrete technical and methodological advice is offered in the research data cycle - from the collection of the data, their preparation and archiving, to publication and reuse.
CLARIN-LV is a national node of Clarin ERIC (Common Language Resources and Technology Infrastructure). The mission of the repository is to ensure the availability and long­ term preservation of language resources. The data stored in the repository are being actively used and cited in scientific publications.
The European Centre for Medium-Range Weather Forecasts (ECMWF) is an independent intergovernmental organisation supported by 34 states. ECMWF is both a research institute and a 24/7 operational service, producing and disseminating numerical weather predictions to its Member States. This data is fully available to the national meteorological services in the Member States. The Centre also offers a catalogue of forecast data that can be purchased by businesses worldwide and other commercial customers Forecasts, analyses, climate re-analyses, reforecasts and multi-model data are available from our archive (MARS) or via dedicated data servers or via point-to-point dissemination
The European Union Open Data Portal is the single point of access to a growing range of data from the institutions and other bodies of the European Union (EU). Data are free for you to use and reuse for commercial or non-commercial purposes. By providing easy and free access to data, the portal aims to promote their innovative use and unleash their economic potential. It also aims to help foster the transparency and the accountability of the institutions and other bodies of the EU. The EU Open Data Portal is managed by the Publications Office of the European Union. Implementation of the EU's open data policy is the responsibility of the Directorate-General for Communications Networks, Content and Technology of the European Commission.
ArrayExpress is one of the major international repositories for high-throughput functional genomics data from both microarray and high-throughput sequencing studies, many of which are supported by peer-reviewed publications. Data sets are submitted directly to ArrayExpress and curated by a team of specialist biological curators. In the past (until 2018) datasets from the NCBI Gene Expression Omnibus database were imported on a weekly basis. Data is collected to MIAME and MINSEQE standards.
The ProteomeXchange consortium has been set up to provide a single point of submission of MS proteomics data to the main existing proteomics repositories, and to encourage the data exchange between them for optimal data dissemination. Current members accepting submissions are: The PRIDE PRoteomics IDEntifications database at the European Bioinformatics Institute focusing mainly on shotgun mass spectrometry proteomics data PeptideAtlas/PASSEL focusing on SRM/MRM datasets.
<<<!!!<<< Efforts to obtain renewed funding after 2008 were unfortunately not successful. PANDIT has therefore been frozen since November 2008, and its data are not updated since September 2005 when version 17.0 was released (corresponding to Pfam 17.0). The existing data and website remain available from these pages, and should remain stable and, we hope, useful. >>>!!!>>> PANDIT is a collection of multiple sequence alignments and phylogenetic trees. It contains corresponding amino acid and nucleotide sequence alignments, with trees inferred from each alignment. PANDIT is based on the Pfam database (Protein families database of alignments and HMMs), and includes the seed amino acid alignments of most families in the Pfam-A database. DNA sequences for as many members of each family as possible are extracted from the EMBL Nucleotide Sequence Database and aligned according to the amino acid alignment. PANDIT also contains a further copy of the amino acid alignments, restricted to the sequences for which DNA sequences were found.
The CLARIN Centre at the University of Copenhagen, Denmark, hosts and manages a data repository (CLARIN-DK-UCPH Repository), which is part of a research infrastructure for humanities and social sciences financed by the University of Copenhagen. The CLARIN-DK-UCPH Repository provides easy and sustainable access for scholars in the humanities and social sciences to digital language data (in written, spoken, video or multimodal form) and provides advanced tools for discovering, exploring, exploiting, annotating, and analyzing data. CLARIN-DK also shares knowledge on Danish language technology and resources and is the Danish node in the European Research Infrastructure Consortium, CLARIN ERIC.
The Electron Microscopy Data Bank (EMDB) is a public repository for electron microscopy density maps of macromolecular complexes and subcellular structures. It covers a variety of techniques, including single-particle analysis, electron tomography, and electron (2D) crystallography.
The focus of CLARIN INT Portal is on resources that are relevant to the lexicological study of the Dutch language and on resources relevant for research in and development of language and speech technology. For Example: lexicons, lexical databases, text corpora, speech corpora, language and speech technology tools, etc. The resources are: Cornetto-LMF (Lexicon Markup Framework), Corpus of Contemporary Dutch (Corpus Hedendaags Nederlands), Corpus Gysseling, Corpus VU-DNC (VU University Diachronic News text Corpus), Dictionary of the Frisian Language (Woordenboek der Friese Taal), DuELME-LMF (Lexicon Markup Framework), Language Portal (Taalportaal), Namescape, NERD (Named Entity Recognition and Disambiguation) and TICCLops (Text-Induced Corpus Clean-up online processing system).
The Language Archive at the Max Planck Institute in Nijmegen provides a unique record of how people around the world use language in everyday life. It focuses on collecting spoken and signed language materials in audio and video form along with transcriptions, analyses, annotations and other types of relevant material (e.g. photos, accompanying notes).
<<<!!!<<< This site is no longer maintained and is provided for reference only. Some functionality or links may not work. For all enquiries please contact the Ensembl Helpdesk http://www.ensembl.org/Help/Contact >>>!!!>>> PhytoPath is a new bioinformatics resource that integrates genome-scale data from important plant pathogen species with literature-curated information about the phenotypes of host infection. Using the Ensembl Genomes browser, it provides access to complete genome assembly and gene models of priority crop and model-fungal, oomycete and bacterial phytopathogens. PhytoPath also links genes to disease progression using data from the curated PHI-base resource. PhytoPath portal is a joint project bringing together Ensembl Genomes with PHI-base, a community-curated resource describing the role of genes in pathogenic infection. PhytoPath provides access to genomic and phentoypic data from fungal and oomycete plant pathogens, and has enabled a considerable increase in the coverage of phytopathogen genomes in Ensembl Fungi and Ensembl Protists. PhytoPath also provides enhanced searching of the PHI-base resource as well as the fungi and protists in Ensembl Genomes.