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Found 80 result(s)

BIGG Database

Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions

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BiGG is a knowledgebase of Biochemically, Genetically and Genomically structured genome-scale metabolic network reconstructions. BiGG integrates several published genome-scale metabolic networks into one resource with standard nomenclature which allows components to be compared across different organisms. BiGG can be used to browse model content, visualize metabolic pathway maps, and export SBML files of the models for further analysis by external software packages. Users may follow links from BiGG to several external databases to obtain additional information on genes, proteins, reactions, metabolites and citations of interest.

Antarctic & Southern Ocean Data Portal

ASODS

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The Antarctic and Southern Ocean Data Portal, part of the US Antarctic Data Consortium, provides access to geoscience data, primarily marine, from the Antarctic region. The synthesis began in 2003 as the Antarctic Multibeam Bathymetry and Geophysical Data Synthesis (AMBS) with a focus on multibeam bathymetry field data and other geophysical data from the Southern Ocean collected with the R/V N. B. Palmer. In 2005, the effort was expanded to include all routine underway geophysical and oceanographic data collected with both the R/V N. B. Palmer and R/V L. Gould, the two primary research vessels serving the US Antarctic Program.

LAADS DAAC

LAADS web

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LAADS DAAC is the web interface to the Level 1 and Atmosphere Archive and Distribution System (LAADS). The mission of LAADS is to provide quick and easy access to MODIS Level 1, Atmosphere and Land data products, VIIRS Level 1 and Land data products MAS and MERIS data products. MODIS (or Moderate Resolution Imaging Spectroradiometer) is a key instrument aboard the Terra (EOS AM) and Aqua (EOS PM) satellites.

Borealis

Borealis, the Canadian Dataverse Repository

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Borealis, the Canadian Dataverse Repository, is a bilingual, multidisciplinary, secure, Canadian research data repository, supported by academic libraries and research institutions across Canada. Borealis supports open discovery, management, sharing, and preservation of Canadian research data. Borealis is available to researchers who are affiliated with a participating Canadian university or research organization and their collaborators. Borealis is a shared service provided in partnership with Canadian regional academic library consortia, institutions, research organizations, and the Digital Research Alliance of Canada, with technical infrastructure hosted by Scholars Portal and the University of Toronto Libraries.

VIPERdb

Virus Particle Explorer database

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VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration. In addition, all virus capsids are placed in a single icosahedral orientation convention, facilitating comparison between different structures. The web site includes powerful search utilities , links to other relevant databases, background information on virus capsid structure, and useful database interface tools.

doRiNA

database of RNA interactions in post-transcriptional regulation

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doRiNA is a database of transcriptome-wide binding site data for RNA binding proteins and microRNAs

Kadi4Mat

Kadi4Mat instance KIT+

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Kadi4Mat instance for use at the Karlsruhe Institute of Technology (KIT) and for cooperations, including the Cluster of Competence for Solid-state Batteries (FestBatt), the Battery Competence Cluster Analytics/Quality Assurance (AQua), and more. Kadi4Mat is the Karlsruhe Data Infrastructure for Materials Science, an open source software for managing research data. It is being developed as part of several research projects at the Institute for Applied Materials - Microstructure Modelling and Simulation (IAM-MMS) of the Karlsruhe Institute of Technology (KIT). The goal of this project is to combine the ability to manage and exchange data, the repository , with the possibility to analyze, visualize and transform said data, the electronic lab notebook (ELN). Kadi4Mat supports a close cooperation between experimenters, theorists and simulators, especially in materials science, to enable the acquisition of new knowledge and the development of novel materials. This is made possible by employing a modular and generic architecture, which allows to cover the specific needs of different scientists, each utilizing unique workflows. At the same time, this opens up the possibility of covering other research disciplines as well.

ScienceBase USGS

ScienceBase catalog

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ScienceBase provides access to aggregated information derived from many data and information domains, including feeds from existing data systems, metadata catalogs, and scientists contributing new and original content. ScienceBase architecture is designed to help science teams and data practitioners centralize their data and information resources to create a foundation needed for their work. ScienceBase, both original software and engineered components, is released as an open source project to promote involvement from the larger scientific programming community both inside and outside the USGS.

Nasa's Data Portal

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DATA.NASA.GOV is NASA's clearinghouse site for open-data provided to the public. Tens of thousands of datasets are available for you. This site is a continually growing catalog of publicly available NASA Datasets, APIs, Visualizations, and more.

University of Victoria Dataverse

UVic Dataverse

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The University of Victoria Dataverse is a research data repository for our faculty, researchers, and students. It is a general repository, suitable for all disciplines, and accepts a wide range of data types and formats. All deposited files are held in a secure environment on Canadian servers, and depositors can choose to make content available publicly, to specific individuals, or to keep it locked.

NCEI

NOAA National Centers for Environmental Information

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NOAA's National Centers for Environmental Information (NCEI) are responsible for hosting and providing public access to one of the most significant archives for environmental data on Earth with over 20 petabytes of comprehensive atmospheric, coastal, oceanic, and geophysical data. NCEI headquarters are located in Asheville, North Carolina. Most employees work in the four main locations, but apart from those locations, NCEI has employees strategically located throughout the United States. The main locations are Cooperative Institute for Climate and Satellites–North Carolina (CICS-NC) at Asheville, North Carolina, Cooperative Institute for Research in Environmental Sciences (CIRES) at Boulder Colorado, Cooperative Institute for Climate and Satellites–Maryland (CICS-MD) at Silver Spring Maryland and Stennis Space Center, Mississippi.

GeoPRISMS Data Portal

Geodyanmic Processes at Rifting and Subducting Margins

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The GeoPRISMS Data Portal was established in early 2011 to serve the NSF-funded GeoPRISMS program as a dedicated data system to facilitate open and timely exchange of data in support of the interdisciplinary science goals of the program. GeoPrisms Data Portal focuses upon the coordinated, interdisciplinary investigation of the continental margins through two initiatives: the Subduction Cycles and Deformation (SCD) and Rift Initiation and Evolution (RIE). In order to address the fundamental scientific questions, each initiative is associated with Primary Sites to address a wide range of field, experimental and theoretical studies spanning broad spatial and temporal scales.

Central Neuroimaging Data Archive

CNDA

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The Central Neuroimaging Data Archive (CNDA) allows for sharing of complex imaging data to investigators around the world, through a simple web portal. The CNDA is an imaging informatics platform that provides secure data management services for Washington University investigators, including source DICOM imaging data sharing to external investigators through a web portal, cnda.wustl.edu. The CNDA’s services include automated archiving of imaging studies from all of the University’s research scanners, automated quality control and image processing routines, and secure web-based access to acquired and post-processed data for data sharing, in compliance with NIH data sharing guidelines. The CNDA is currently accepting datasets only from Washington University affiliated investigators. Through this platform, the data is available for broad sharing with researchers both internal and external to Washington University.. The CNDA overlaps with data in oasis-brains.org https://www.re3data.org/repository/r3d100012182, but CNDA is a larger data set.

ISRIC - World Soil Information

WDC-Soils

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ISRIC - World Soil Information is an independent foundation. As regular member of the ICS World Data System it is also known as World Data Centre for Soils (WDC-Soils). ISRIC was founded in 1966 through the International Soil Science Society (ISSS) and United Nations Educational, Scientific and Cultural Organization (UNESCO), with a mission to "help to increase the availability and use of soil data, information and knowledge to enable better decision making for sustainable land management around the world". Our work is organised according to four work streams: 1) Global soil information & standards, 2) Community of practice for soil information providers, 3) Products and services to support SLM (sustainable land management) decision making, and 4) Awareness, education and dialogues. data.isric.org is our central location for searching and downloading soil data bases/maps from around the world. We support Open Data whenever possible, respecting inherited rights (licenses).

GlyTouCan

International Glycan Repository

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GlyTouCan is the international glycan structure repository. This repository is a freely available, uncurated registry for glycan structures that assigns globally unique accession numbers to any glycan independent of the level of information provided by the experimental method used to identify the structure(s). Any glycan structure, ranging in resolution from monosaccharide composition to fully defined structures can be registered as long as there are no inconsistencies in the structure.

CESSDA Data Catalogue

CESSDA DC

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The CESSDA Data Catalogue contains the metadata of all data in the holdings of CESSDA service providers. It is a one-stop-shop for search and discovery, enabling effective access to European research data for researchers. Details of over 40, 000 data collections are listed. These are harvested from fifteen different CESSDA Service Providers.

National Ecological Observatory Network

NEON

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Funded by the National Science Foundation (NSF) and proudly operated by Battelle, the National Ecological Observatory Network (NEON) program provides open, continental-scale data across the United States that characterize and quantify complex, rapidly changing ecological processes. The Observatory’s comprehensive design supports greater understanding of ecological change and enables forecasting of future ecological conditions. NEON collects and processes data from field sites located across the continental U.S., Puerto Rico, and Hawaii over a 30-year timeframe. NEON provides free and open data that characterize plants, animals, soil, nutrients, freshwater, and the atmosphere. These data may be combined with external datasets or data collected by individual researchers to support the study of continental-scale ecological change.

Lingnan Dataverse

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Lingnan Dataverse serves as an institutional research data repository for Lingnan University in Hong Kong. It provides a secure platform for the Lingnan research community to deposit, share, and publish their research datasets, and supports data reuse by the global research community.

NatureServe

NatureServe network

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NatureServe and its network of member programs are a leading source for reliable scientific information about species and ecosystems of the Western Hemisphere. This site serves as a portal for accessing several types of publicly available biodiversity data.

Curtin University Research Data Collection

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Curtin University has 2758 data records in Research Data Australia, which cover 527 subjects areas including EARTH SCIENCES, GEOLOGY and MINERAL EXPLORATION and involve 64 group(s).

GeoPlatform

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The GeoPlatform provides shared and trusted geospatial data, services, and applications for use by the public and by government agencies and partners to meet their mission needs.

Ensembl Bacteria

e!EnsemblBacteria

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This site provides access to complete, annotated genomes from bacteria and archaea (present in the European Nucleotide Archive) through the Ensembl graphical user interface (genome browser). Ensembl Bacteria contains genomes from annotated INSDC records that are loaded into Ensembl multi-species databases, using the INSDC annotation import pipeline.

The Cancer Imaging Archive

TCIA

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TCIA is a service which de-identifies and hosts a large archive of medical images of cancer accessible for public download. The data are organized as “collections”; typically patients’ imaging related by a common disease (e.g. lung cancer), image modality or type (MRI, CT, digital histopathology, etc) or research focus. Supporting data related to the images such as patient outcomes, treatment details, genomics and expert analyses are also provided when available.

Texas Data Repository

TDR

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The Texas Data Repository is a platform for publishing and archiving datasets (and other data products) created by faculty, staff, and students at Texas higher education institutions. The repository is built in an open-source application called Dataverse, developed and used by Harvard University. The repository is hosted by the Texas Digital Library, a consortium of academic libraries in Texas with a proven history of providing shared technology services that support secure, reliable access to digital collections of research and scholarship. For a list of TDL participating institutions, please visit: https://www.tdl.org/members/.

Dataverse UNIMI

Dataverse Università degli Studi di Milano

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Dataverse UNIMI is the institutional data repository of the University of Milan. The service aims at facilitating data discovery, data sharing, and reuse, as required by funding institutions (eg. European Commission). Datasets published in the archive have a set of metadata that ensure proper description and discoverability.