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Found 62 result(s)

Electron-Impact Excitation of Multicharged Ions using MEIBEL

Electron-Impact Excitation of Multicharged Ions using Merged Electron-Ion Beams Energy Loss

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>>>!!!<<< 2019-12-04: The repository is no longer available >>>!!!<<< Presented here are excitation cross sections measured for a select number of transitions using the Merged Electron-Ion Beams Energy Loss (MEIBEL) experiment. This is a collaboration of JILA and the Multicharged Ion Research Facility (MIRF) at Oak Ridge National Laboratory (ORNL), where the apparatus is located. Since there exist a nearly infinite number of transitions in multicharged ions we have chosen a few that serve as benchmarks for theoretical efforts. Of particular interest are forbidden transitions which are often dominated by dielectronic resonances whose positions and magnitudes are difficult to predict theoretically.

SIDER

Side Effect Resource

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SIDER contains information on marketed medicines and their recorded adverse drug reactions. The information is extracted from public documents and package inserts. The available information include side effect frequency, drug and side effect classifications as well as links to further information, for example drug–target relations.

Health Atlas

Leipzig Health Atlas

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The Health Atlas is an alliance of medical ontologists, medical systems biologists and clinical trials groups to design and implement a multi-functional and quality-assured atlas. It provides models, data and metadata on specific use cases from medical research projects from the partner institutions.

Hakai Data

Hakai Institute Data Systems

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Hakai Data stores and shares research information associated with Hakai Institute. The Hakai Institute is a scientific research institution that advances long-term research at remote locations on the coastal margin of British Columbia, Canada. Hakai Data Systems: Data Catalogue, Sensor Network, Geospatial Data, Weather Stations and Webcams, ERDDAP Data Server

UQ eSpace, Research Data Collections

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UQ eSpace is the single authoritative source for the research outputs of the staff and students of the University of Queensland and is the archival home of UQ Research Higher Degree digital theses. UQ eSpace raises the visibility and accessibility of UQ publications to the wider world and provides data for mandatory Government reporting requirements such as the Higher Education Research Data Collection (HERDC) and Excellence in Research for Australia (ERA) as well as for the internal UQ systems such as the Q-Index. It also operates as an institutional repository for open access publications, research datasets and other digitised materials created by staff of the University such as print materials, photographs, audio materials, videos, manuscripts and other original works.

FlyReactome

a curated knowledgebase of drosophila melanogaster pathways

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<<<!!!<<< This repository is no longer available. This record is out dated >>>!!!>>>- eir fields, maintained by the FlyReactome staff.

Gramene

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Gramene is a platform for comparative genomic analysis of agriculturally important grasses, including maize, rice, sorghum, wheat and barley. Relationships between cereals are queried and displayed using controlled vocabularies (Gene, Plant, Trait, Environment, and Gramene Taxonomy) and web-based displays, including the Genes and Quantitative Trait Loci (QTL) modules.

CorrDB

Animal Trait Correlation Database

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CorrDB has data of cattle, relating to meat production, milk production, growth, health, and others. This database is designed to collect all published livestock genetic/phenotypic trait correlation data, aimed at facilitating genetic network analysis or systems biology studies.

Electron-Impact Ionization of Multicharged Ions at ORNL

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>>>!!!<<< 2019-12-04: The repository is no longer available >>>!!!<<< Presented here are experimental ionization cross sections measured using the Electron-Ion Crossed Beams apparatus in the Multicharged Ion Research Facility (MIRF) at the Physics Division of Oak Ridge National Laboratory (ORNL). The data are given in both graphical and tabular form along with the reference to the original publication of the experimental results. Also presented in the figures are theoretical cross sections supporting the experiments.

Virus Pathogen Resource

ViPR

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<<<!!!<<< This repository is no longer available. >>>!!!>>> Migration of the data, tools, and services from IRD and ViPR to BV-BRC is complete! We are now in the sunsetting phase of the transition. Starting on October 31, 2022, launching the IRD or ViPR home pages will redirect you to the new BV-BRC home page. The current plan is to completely shut down IRD and ViPR by the end of this calendar year. Although it will still be possible to use those sites until shutdown, we strongly encourage you to start using BV-BRC now.

NeuroVault

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A place where researchers can publicly store and share unthresholded statistical maps, parcellations, and atlases produced by MRI and PET studies.

Morph·D·Base

MorphDBase

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Morph·D·Base has been developed to serve scientific research and education. It provides a platform for storing the detailed documentation of all material, methods, procedures, and concepts applied, together with the specific parameters, values, techniques, and instruments used during morphological data production. In other words, it's purpose is to provide a publicly available resource for recording and documenting morphological metadata. Moreover, it is also a repository for different types of media files that can be uploaded in order to serve as support and empirical substantiation of the results of morphological investigations. Our long-term perspective with Morph·D·Base is to provide an instrument that will enable a highly formalized and standardized way of generating morphological descriptions using a morphological ontology that will be based on the web ontology language (OWL - http://www.w3.org/TR/owl-features/). This, however, represents a project that is still in development.

Phytozome

The JGI Comparative Plant Genomics Portal

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Phytozome is the Plant Comparative Genomics portal of the Department of Energy's Joint Genome Institute. Families of related genes representing the modern descendants of ancestral genes are constructed at key phylogenetic nodes. These families allow easy access to clade-specific orthology/paralogy relationships as well as insights into clade-specific novelties and expansions.

Deposita Dados

Repositório Comum de Dados de Pesquisa

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The Common Research Data Repository (Deposita Dados) is a database for archiving, publishing, disseminating, preserving and sharing digital research data and its mission is to promote, support and facilitate the adoption of open access to the datasets of Brazilian researchers linked to scientific institutions that do not yet have their own research data repositories and/or of Brazilian researchers who have executed their datasets through scientific collaboration in foreign teaching and research institutions.

GAVO Data Centre

German Astrophysical Virtual Observatory Data Centre

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The GAVO data centre at Zentrum für Astronomie Heidelberg publishes astronomical data of all kinds – e.g., catalogues, images, spectra, time series, simulation results – in accordance with Virtual Observatory standards, making them findable and immediately usable through popular clients like TOPCAT, Aladin, or programatically through the astropy-affiliated package pyVO or the Java library STIL. We pay particular attention to providing thorough metadata to the VO Registry in order to facilitate discovery and reuse. While we have a clear focus on data produced with German contributions, we will usually publish data of other provenance, too. See https://docs.g-vo.org/DaCHS/data_checklist.html for an overview of what resource-level metadata we ask for; contact us for further information on how to publish through the German Astronomical Virtual Observatory.

NCBI Genome

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<<<!!!<<< Effective May 2024, NCBI's Genome resource will no longer be available. NCBI Genome data can now be found on the NCBI Datasets taxonomy pages. https://www.re3data.org/repository/r3d100014298 >>>!!!>>> The Genome database contains annotations and analysis of eukaryotic and prokaryotic genomes, as well as tools that allow users to compare genomes and gene sequences from humans, microbes, plants, viruses and organelles. Users can browse by organism, and view genome maps and protein clusters.

AMODS

Atomic Molecular and Optical Database Systems

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The repository is no longer available. <<<!!!<<< 2018-01-18: no more access to AMODS >>>!!!>>>

PUBLISSO-Fachrepositorium Lebenswissenschaften

PUBLISSO-Repository for Life Sciences

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ZB MED's Repository for Life Sciences offers authors the chance to publish their scientific texts and research data from the fields of medicine, health, nutritional, environmental and agricultural sciences. In accordance with the principles of Open Access, these publications can be accessed over the Internet without restrictions. There is no charge to publish, archive or use the documents.

VIPERdb

Virus Particle Explorer database

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VIPERdb is a database for icosahedral virus capsid structures . The emphasis of the resource is on providing data from structural and computational analyses on these systems, as well as high quality renderings for visual exploration. In addition, all virus capsids are placed in a single icosahedral orientation convention, facilitating comparison between different structures. The web site includes powerful search utilities , links to other relevant databases, background information on virus capsid structure, and useful database interface tools.

DataHub Figshare

University of Hong Kong Data Repository

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Provided by the University Libraries, DataHub is the comprehensive institutional repository for research data and scholarly outputs produced by the researchers and students in the University of Hong Kong and their collaborators.

Universal PBM Resource for Oligonucleotide Binding Evaluation

UniPROBE

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The UniPROBE (Universal PBM Resource for Oligonucleotide Binding Evaluation) database hosts data generated by universal protein binding microarray (PBM) technology on the in vitro DNA binding specificities of proteins. This initial release of the UniPROBE database provides a centralized resource for accessing comprehensive data on the preferences of proteins for all possible sequence variants ('words') of length k ('k-mers'), as well as position weight matrix (PWM) and graphical sequence logo representations of the k-mer data. In total, the database currently hosts DNA binding data for 406 nonredundant proteins from a diverse collection of organisms, including the prokaryote Vibrio harveyi, the eukaryotic malarial parasite Plasmodium falciparum, the parasitic Apicomplexan Cryptosporidium parvum, the yeast Saccharomyces cerevisiae, the worm Caenorhabditis elegans, mouse, and human. The database's web tools (on the right) include a text-based search, a function for assessing motif similarity between user-entered data and database PWMs, and a function for locating putative binding sites along user-entered nucleotide sequences

NCBI HomoloGene

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The HomoloGene database provides a system for the automated detection of homologs among annotated genes of genomes across multiple species. These homologs are fully documented and organized by homology group. HomoloGene processing uses proteins from input organisms to compare and sequence homologs, mapping back to corresponding DNA sequences.

Animal Genome Tracks on GBrowse

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Genome track alignments using GBrowse on this site are featured with: (1) Annotated and predicted genes and transcripts; (2) QTL / SNP Association tracks; (3) OMIA genes; (4) Various SNP Chip tracks; (5) Other mapping fetures or elements that are available.

KNMI Data Platform

formerly: KDC

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KDP has replaced the KNMI Data Centre (KDC), which was turned off on the 27th of July 2020. Not only a change of name, but also a transition to new technologies. Initially, the KDP will be more primitive than KDC. To fulfill future ambitions, a digital KNMI transformation has been initiated. Part of this transition is the development of a new KDP as a successor of the KDC. All data on the KNMI Data Platform is free to use. For some datasets a service agreement is available, which is indicated on the page of the dataset. The KNMI Data platform provides access to KNMI data on weather, climate and seismology. Here you will find KNMI data on various subjects such as the most recent 10-minute observations, historical series, data about meteorological measuring stations, model calculations, earthquake data and satellite products. In addition to KNMI datasets, we also make datasets from other parties available, such as ECMWF, ECOMET, EUMETSAT and WMO.

Reality Commons

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Cell phones have become an important platform for the understanding of social dynamics and influence, because of their pervasiveness, sensing capabilities, and computational power. Many applications have emerged in recent years in mobile health, mobile banking, location based services, media democracy, and social movements. With these new capabilities, we can potentially be able to identify exact points and times of infection for diseases, determine who most influences us to gain weight or become healthier, know exactly how information flows among employees and productivity emerges in our work spaces, and understand how rumors spread. In an attempt to address these challenges, we release several mobile data sets here in "Reality Commons" that contain the dynamics of several communities of about 100 people each. We invite researchers to propose and submit their own applications of the data to demonstrate the scientific and business values of these data sets, suggest how to meaningfully extend these experiments to larger populations, and develop the math that fits agent-based models or systems dynamics models to larger populations. These data sets were collected with tools developed in the MIT Human Dynamics Lab and are now available as open source projects or at cost.