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Found 74 result(s)

Research Compendia

Researchcompendia

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>>>>!!!<<< As stated 2017-06-27 The website http://researchcompendia.org is no longer available; repository software is archived on github https://github.com/researchcompendia >>>!!!<<< The ResearchCompendia platform is an attempt to use the web to enhance the reproducibility and verifiability—and thus the reliability—of scientific research. we provide the tools to publish the "actual scholarship" by hosting data, code, and methods in a form that is accessible, trackable, and persistent. Some of our short term goals include: To expand and enhance the platform including adding executability for a greater variety of coding languages and frameworks, and enhancing output presentation. To expand usership and to test the ResearchCompendia model in a number of additional fields, including computational mathematics, statistics, and biostatistics. To pilot integration with existing scholarly platforms, enabling researchers to discover relevant Research Compendia websites when looking at online articles, code repositories, or data archives.

National Archives

NARA

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The National Archives and Records Administration (NARA) is the nation's record keeper. Of all documents and materials created in the course of business conducted by the United States Federal government, only 1%-3% are so important for legal or historical reasons that they are kept by us forever. Those valuable records are preserved and are available to you, whether you want to see if they contain clues about your family’s history, need to prove a veteran’s military service, or are researching an historical topic that interests you.

PubChem

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Pubchem contains 3 databases. 1. PubChem BioAssay: The PubChem BioAssay Database contains bioactivity screens of chemical substances described in PubChem Substance. It provides searchable descriptions of each bioassay, including descriptions of the conditions and readouts specific to that screening procedure. 2. PubChem Compound: The PubChem Compound Database contains validated chemical depiction information provided to describe substances in PubChem Substance. Structures stored within PubChem Compounds are pre-clustered and cross-referenced by identity and similarity groups. 3. PubChem Substance. The PubChem Substance Database contains descriptions of samples, from a variety of sources, and links to biological screening results that are available in PubChem BioAssay. If the chemical contents of a sample are known, the description includes links to PubChem Compound.

WRMC-BSRN

Baseline Surface Radiation Network

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BSRN is a project of the Radiation Panel (now the Data and Assessment Panel) from the Global Energy and Water Cycle Experiment (GEWEX) under the umbrella of the World Climate Research Programme (WCRP). It is the global baseline network for surface radiation for the Global limate Observing System (GCOS), contributing to the Global Atmospheric Watch (GAW), and forming a ooperative network with the Network for the Detection of Atmospheric Composition Change NDACC).

National Cancer Data Base

NCDB

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The nationally recognized National Cancer Database (NCDB)—jointly sponsored by the American College of Surgeons and the American Cancer Society—is a clinical oncology database sourced from hospital registry data that are collected in more than 1,500 Commission on Cancer (CoC)-accredited facilities. NCDB data are used to analyze and track patients with malignant neoplastic diseases, their treatments, and outcomes. Data represent more than 70 percent of newly diagnosed cancer cases nationwide and more than 34 million historical records.

Precipitation Measurement Missions

PMM

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NASA’s Precipitation Measurement Missions – TRMM and GPM – provide advanced information on rain and snow characteristics and detailed three-dimensional knowledge of precipitation structure within the atmosphere, which help scientists study and understand Earth's water cycle, weather and climate.

tDAR

The Digital Archaeological Record

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The Digital Archaeological Record (tDAR) is an international digital repository for the digital records of archaeological investigations. tDAR’s use, development, and maintenance are governed by Digital Antiquity, an organization dedicated to ensuring the long-term preservation of irreplaceable archaeological data and to broadening the access to these data.

NASA/IPAC Extragalactic Database

NED

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NED is a comprehensive database of multiwavelength data for extragalactic objects, providing a systematic, ongoing fusion of information integrated from hundreds of large sky surveys and tens of thousands of research publications. The contents and services span the entire observed spectrum from gamma rays through radio frequencies. As new observations are published, they are cross- identified or statistically associated with previous data and integrated into a unified database to simplify queries and retrieval. Seamless connectivity is also provided to data in NASA astrophysics mission archives (IRSA, HEASARC, MAST), to the astrophysics literature via ADS, and to other data centers around the world.

USDA Economics, Statistics and Market Information System

ESMIS

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The USDA Economics, Statistics and Market Information System contains reports and datasets of multiple agencies within the United States Department of Agriculture, including the Agricultural Marketing Service, the Economic Research Service, the Foreign Agricultural Service, the National Agricultural Statistics Service, and the World Agricultural Outlook Board. Historical and current reports and datasets are included.

Animal QTLdb

Animal Quantitative Trait Loci

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This Animal Quantitative Trait Loci (QTL) database (Animal QTLdb) is designed to house all publicly available QTL and trait mapping data (i.e. trait and genome location association data; collectively called "QTL data" on this site) on livestock animal species for easily locating and making comparisons within and between species. New database tools are continuely added to align the QTL and association data to other types of genome information, such as annotated genes, RH / SNP markers, and human genome maps. Besides the QTL data from species listed below, the QTLdb is open to house QTL/association date from other animal species where feasible. Note that the JAS along with other journals, now require that new QTL/association data be entered into a QTL database as part of their publication requirements.

PMN

Plant Metabolic Network

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The Plant Metabolic Network (PMN) provides a broad network of plant metabolic pathway databases that contain curated information from the literature and computational analyses about the genes, enzymes, compounds, reactions, and pathways involved in primary and secondary metabolism in plants. The PMN currently houses one multi-species reference database called PlantCyc and 22 species/taxon-specific databases.

Metropolitan Travel Survey Archive

MTSA

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The Metropolitan Travel Survey Archive (MTSA) includes travel surveys from numerous public agencies across the United States. The Transportation Secure Data Center has archived these surveys to ensure their continued public availability. The survey data have been converted to a standard file format and cleansed to remove personally identifiable information, including any detailed spatial data regarding individual trips.

CHIANTI

An Atomic Database for Spectroscopic Diagnostics of Astrophysical Plasmas

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CHIANTI consists of a critically evaluated set of up-to-date atomic data, together with user-friendly programs written in Interactive Data Language (IDL) and Python to calculate the spectra from astrophysical plasmas.

Magnetics Information Consortium

MagIC

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The Magnetics Information Consortium (MagIC) improves research capacity in the Earth and Ocean sciences by maintaining an open community digital data archive for rock magnetic, geomagnetic, archeomagnetic (archaeomagnetic) and paleomagnetic (palaeomagnetic) data. Different parts of the website allow users access to archive, search, visualize, and download these data. MagIC supports the international rock magnetism, geomagnetism, archeomagnetism (archaeomagnetism), and paleomagnetism (palaeomagnetism) research and endeavors to bring data out of private archives, making them accessible to all and (re-)useable for new, creative, collaborative scientific and educational activities. The data in MagIC is used for many types of studies including tectonic plate reconstructions, geomagnetic field models, paleomagnetic field reversal studies, magnetohydrodynamical studies of the Earth's core, magnetostratigraphy, and archeology. MagIC is a domain-specific data repository and directed by PIs who are both producers and consumers of rock, geo, and paleomagnetic data. Funded by NSF since 2003, MagIC forms a major part of https://earthref.org which integrates four independent cyber-initiatives rooted in various parts of the Earth, Ocean and Life sciences and education.

International Mouse Strain Resource

IMSR

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The IMSR is a searchable online database of mouse strains, stocks, and mutant ES cell lines available worldwide, including inbred, mutant, and genetically engineered strains. The goal of the IMSR is to assist the international scientific community in locating and obtaining mouse resources for research. Note that the data content found in the IMSR is as supplied by strain repository holders. For each strain or cell line listed in the IMSR, users can obtain information about: Where that resource is available (Repository Site); What state(s) the resource is available as (e.g. live, cryopreserved embryo or germplasm, ES cells); Links to descriptive information about a strain or ES cell line; Links to mutant alleles carried by a strain or ES cell line; Links for ordering a strain or ES cell line from a Repository; Links for contacting the Repository to send a query

Index to Marine & Lacustrine Geological Samples

IMLGS

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The Index to Marine and Lacustrine Geological Samples is a tool to help scientists locate and obtain geologic material from sea floor and lakebed cores, grabs, and dredges archived by participating institutions around the world. Data and images related to the samples are prepared and contributed by the institutions for access via the IMLGS and long-term archive at NGDC. Before proposing research on any sample, please contact the curator for sample condition and availability. A consortium of Curators guides the IMLGS, maintained on behalf of the group by NGDC, since 1977.

NOAA's climate data record program

Climate data record program

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Climate Data Record (CDR) is a time series of measurements of sufficient length, consistency and continuity to determine climate variability and change. The fundamental CDRs include sensor data, such as calibrated radiances and brightness temperatures, that scientists have improved and quality-controlled along with the data used to calibrate them. The thematic CDRs include geophysical variables derived from the fundamental CDRs, such as sea surface temperature and sea ice concentration, and they are specific to various disciplines.

Bugwood Image Database System

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bugwood.org is the host website of the Center for Invasive Species and Ecosystem Health at the University of Georgia (Formerly: Bugwood Network). The Center aims to develop, consolidate and disseminate information and programmes focused on invasive species, forest health, natural resources and agricultural management through technology development, programmes implementation, training, applied research and public awareness at state, regional, national and international levels. The site gives details of its products (Bugwood Image Database; Early Detection and Distribution Mapping and Bugwoodwiki). Details of its projects, services and personnel are provided. Users can also access image databases on Forestry, Insects, IPM, Invasive Species, Forest Pests, weed and Bark Beetle.

Mouse Genome Informatics

MGI

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MGI is the international database resource for the laboratory mouse, providing integrated genetic, genomic, and biological data to facilitate the study of human health and disease. The projects contributing to this resource are: Mouse Genome Database (MGD) Project, Gene Expression Database (GXD) Project, Mouse Tumor Biology (MTB) Database Project, Gene Ontology (GO) Project at MGI, MouseMine Project, MouseCyc Project at MGI

Inspire-HEP

Inspire-High Energy Physics

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CERN, DESY, Fermilab and SLAC have built the next-generation High Energy Physics (HEP) information system, INSPIRE. It combines the successful SPIRES database content, curated at DESY, Fermilab and SLAC, with the Invenio digital library technology developed at CERN. INSPIRE is run by a collaboration of CERN, DESY, Fermilab, IHEP, IN2P3 and SLAC, and interacts closely with HEP publishers, arXiv.org, NASA-ADS, PDG, HEPDATA and other information resources. INSPIRE represents a natural evolution of scholarly communication, built on successful community-based information systems, and provides a vision for information management in other fields of science.

GEON

GEONGRID

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-----<<<<< The repository is no longer available. This record is out-dated. >>>>>----- GEON is an open collaborative project that is developing cyberinfrastructure for integration of 3 and 4 dimensional earth science data. GEON will develop services for data integration and model integration, and associated model execution and visualization. Mid-Atlantic test bed will focus on tectonothermal, paleogeographic, and biotic history from the late-Proterozoicto mid-Paleozoic. Rockies test bed will focus on integration of data with dynamic models, to better understand deformation history. GEON will develop the most comprehensive regional datasets in test bed areas.

National Weather Service, National Centers for Environmental Prediction

National Centers for Environmental Prediction

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NCEP delivers national and global weather, water, climate and space weather guidance, forecasts, warnings and analyses to its Partners and External User Communities. The National Centers for Environmental Prediction (NCEP), an arm of the NOAA's National Weather Service (NWS), is comprised of nine distinct Centers, and the Office of the Director, which provide a wide variety of national and international weather guidance products to National Weather Service field offices, government agencies, emergency managers, private sector meteorologists, and meteorological organizations and societies throughout the world. NCEP is a critical national resource in national and global weather prediction. NCEP is the starting point for nearly all weather forecasts in the United States. The Centers are: Aviation Weather Center (AWC), Climate Prediction Center (CPC), Environmental Modeling Center (EMC), NCEP Central Operations (NCO), National Hurricane Center (NHC), Ocean Prediction Center (OPC), Storm Prediction Center (SPC), Space Weather Prediction Center (SWPC), Weather Prediction Center (WPC)

OSF - Vrije Universiteit Amsterdam

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A Research Data Management Tool for the Vrije Universiteit Amsterdam Research Community.

National Sleep Research Resource

NSRR

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The National Sleep Research Resource (NSRR) is an NHLBI-supported repository for sharing large amounts of sleep data (polysomnography, actigraphy and questionnaire-based) from multiple cohorts, clinical trials, and other data sources. Launched in April 2014, the mission of the NSRR is to advance sleep and circadian science by supporting secondary data analysis, algorithmic development, and signal processing through the sharing of high-quality data sets.

Washington University Research Data

WURD

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The WashU Research Data repository accepts any publishable research data set, including textual, tabular, geospatial, imagery, computer code, or 3D data files, from researchers affiliated with Washington University in St. Louis. Datasets include metadata and are curated and assigned a DOI to align with FAIR data principles.