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Found 1338 result(s)

Breast Cancer Surveillance Consortium

BCSC

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The Breast Cancer Surveillance Consortium (BCSC) is a research resource for studies designed to assess the delivery and quality of breast cancer screening and related patient outcomes in the United States. The BCSC is a collaborative network of seven mammography registries with linkages to tumor and/or pathology registries. The network is supported by a central Statistical Coordinating Center.

1000 Functional Connectomes Project

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The FCP entailed the aggregation and public release (via www.nitrc.org) of over 1200 resting state fMRI (R-fMRI) datasets collected from 33 sites around the world.

Global Catalogue of Microorganisms

GCM

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WFCC Global Catalogue of Microorganisms (GCM) is expected to be a robust, reliable and user-friendly system to help culture collections to manage, disseminate and share the information related to their holdings. It also provides a uniform interface for the scientific and industrial communities to access the comprehensive microbial resource information.

ViralZone

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ViralZone is a SIB Swiss Institute of Bioinformatics web-resource for all viral genus and families, providing general molecular and epidemiological information, along with virion and genome figures. Each virus or family page gives an easy access to UniProtKB/Swiss-Prot viral protein entries.

Senckenberg (meta) data portal

Senckenberg (meta) data catalog

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This is the (meta) data catalog of Senckenberg Nature Research Society.

Natural Heritage Information Centre

Centre d'information sur le patrimoine naturel

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The Ontario Natural Heritage Information Centre (NHIC) compiles, maintains and provides information on rare, threatened and endangered species and spaces in Ontario. This information is stored in a central repository composed of computerized databases, map files and an information library, which are accessible for conservation applications, land use development planning, park management, etc. Ministry of Natural Resources, Ontario.

CATH

CATH-Gene3D

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The CATH database is a hierarchical domain classification of protein structures in the Protein Data Bank. Protein structures are classified using a combination of automated and manual procedures. There are four major levels in the CATH hierarchy; Class, Architecture, Topology and Homologous superfamily.

Biosamples

Biosample Database at EBI

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BioSamples stores and supplies descriptions and metadata about biological samples used in research and development by academia and industry. Samples are either 'reference' samples (e.g. from 1000 Genomes, HipSci, FAANG) or have been used in an assay database such as the European Nucleotide Archive (ENA) or ArrayExpress.

BioStudies

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The BioStudies database holds descriptions of biological studies, links to data from these studies in other databases at EMBL-EBI or outside, as well as data that do not fit in the structured archives at EMBL-EBI. The database accepts submissions via an online tool, or in a simple tab-delimited format. It also enables authors to submit supplementary information and link to it from the publication.

Comprehensive Antibiotic Resistance Database

CARD

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A bioinformatic database of antimicrobial resistance genes, their products and associated phenotypes.

FactSage

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FactSage is a fully integrated Canadian thermochemical database system which couples proven software with self-consistent critically assessed thermodynamic data. It currently contains data on over 5000 chemical substances as well as solution databases representing over 1000 non-ideal multicomponent solutions (oxides, salts, sulfides, alloys, aqueous, etc.). FactSage is available for use with Windows.

Project Tycho: Data for Health

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Project Tycho is a repository for global health, particularly disease surveillance data. Project Tycho currently includes data for 92 notifiable disease conditions in the US, and up to three dengue-related conditions for 99 countries. Project Tycho has compiled data from reputable sources such as the US Centers for Disease Control, the World Health Organization, and National health agencies for countries around the world. Project Tycho datasets are highly standardized and have rich metadata to improve access, interoperability, and reuse of global health data for research and innovation.

FAIRDOMHub

The SEEK datafiles

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The FAIRDOMHub is built upon the SEEK software suite, which is an open source web platform for sharing scientific research assets, processes and outcomes. FAIRDOM (Web Site) will establish a support and service network for European Systems Biology. It will serve projects in standardizing, managing and disseminating data and models in a FAIR manner: Findable, Accessible, Interoperable and Reusable. FAIRDOM is an initiative to develop a community, and establish an internationally sustained Data and Model Management service to the European Systems Biology community. FAIRDOM is a joint action of ERA-Net EraSysAPP and European Research Infrastructure ISBE.

Geodatenkatalog

Geodatenkatalog.de

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The Geodatenkatalog.de is the metadata information system of the Geodateninfrastruktur Deutschland (GDI-DE) and forms the data basis for Geoportal.de. With the help of this central component, metadata for geodata sets, geodata services, and other IT-supported geodata applications are collected and can be researched and retrieved via Geoportal.de.

DEPOD

DEPhOsphorylation Database

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DEPOD - the human DEPhOsphorylation Database (version 1.1) is a manually curated database collecting human active phosphatases, their experimentally verified protein and non-protein substrates and dephosphorylation site information, and pathways in which they are involved. It also provides links to popular kinase databases and protein-protein interaction databases for these phosphatases and substrates. DEPOD aims to be a valuable resource for studying human phosphatases and their substrate specificities and molecular mechanisms; phosphatase-targeted drug discovery and development; connecting phosphatases with kinases through their common substrates; completing the human phosphorylation/dephosphorylation network.

AfDB Statistical Data Portal

formerly: Open data for Africa

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The African Development Bank Group (AfDB) is committed to supporting statistical development in Africa as a sound basis for designing and managing effective development policies for reducing poverty on the continent. Reliable and timely data is critical to setting goals and targets as well as evaluating project impact. Reliable data constitutes the single most convincing way of getting the people involved in what their leaders and institutions are doing. It also helps them to get involved in the development process, thus giving them a sense of ownership of the entire development process. The AfDB has a large team of researchers who focus on the production of statistical data on economic and social situations. The data produced by the institution’s statistics department constitutes the background information in the Bank’s flagship development publications. Besides its own publication, the AfDB also finances studies in collaboration with its partners. The Statistics Department aims to stand as the primary source of relevant, reliable and timely data on African development processes, starting with the data generated from its current management of the Africa component of the International Comparison Program (ICP-Africa). The Department discharges its responsibilities through two divisions: The Economic and Social Statistics Division (ESTA1); The Statistical Capacity Building Division (ESTA2)

Linguistic Data Consortium

LDC

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The Linguistic Data Consortium (LDC) is an open consortium of universities, libraries, corporations and government research laboratories. It was formed in 1992 to address the critical data shortage then facing language technology research and development. Initially, LDC's primary role was as a repository and distribution point for language resources. Since that time, and with the help of its members, LDC has grown into an organization that creates and distributes a wide array of language resources. LDC also supports sponsored research programs and language-based technology evaluations by providing resources and contributing organizational expertise. LDC is hosted by the University of Pennsylvania and is a center within the University’s School of Arts and Sciences.

TwinsUK

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The TwinsUK resource is the biggest UK adult twin registry of 14.000 twins used to study the genetic and environmental aetiology of age related complex traits and diseases.

GPS-PDR ISDC

GPS Potsdam Dresden Reprocessing

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<<<!!!<<< The data is in the phase of migration to another system. Therefore the repository is no longer available. This record is out-dated.; 2020-10-06 !!! >>>!!!>>> Due to the changes at the individual IGS analysis centers during these years the resulting time series of global geodetic parameters are inhomogeneous and inconsistent. A geophysical interpretation of these long series and the realization of a high-accuracy global reference frame are therefore difficult and questionable. The GPS reprocessing project GPS-PDR (Potsdam Dresden Reprocessing), initiated by TU München and TU Dresden and continued by GFZ Potsdam and TU Dresden, provides selected products of a homogeneously reprocessed global GPS network such as GPS satellite orbits and Earth rotation parameters.

TanDEM-X ISDC

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<<<!!!<<< This page is no longer available. >>>!!!>>>

Avon Longitudinal Study of Parents and Children

ALSPAC

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ALSPAC is a longitudinal birth cohort study which enrolled pregnant women who were resident in one of three Bristol-based health districts in the former County of Avon with an expected delivery date between 1st April 1991 and 31st December 1992. Around 14,000 pregnant women were initially recruited. Detailed information has been collected on these women, their partners and subsequent children using self-completion questionnaires, data extraction from medical notes, linkage to routine information systems and from hands-on research clinics. Additional cohorts of participants have since been enrolled in their own right including fathers, siblings, children of the children and grandparents of the children. Ethical approval for the study was obtained from the ALSPAC Ethics and Law Committee (IRB00003312) and Local Research Ethics.

Stemformatics

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Stemformatics is a collaboration between the stem cell and bioinformatics community. We were motivated by the plethora of exciting cell models in the public and private domains, and the realisation that for many biologists these were mostly inaccessible. We wanted a fast way to find and visualise interesting genes in these exemplar stem cell datasets. We'd like you to explore. You'll find data from leading stem cell laboratories in a format that is easy to search, easy to visualise and easy to export.

Pacific Islands Families Study

PIF Study

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The Pacific Islands Families (PIF) Study is an ongoing longitudinal birth cohort study that has been tracking the health and development of 1,398 Pacific children and their parents since the children were born at Middlemore Hospital in South Auckland in the year 2000. It is the only prospective study specifically of Pacific peoples in the world.

BAliBASE

Benchmark Alignment dataBASE

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A collection of high quality multiple sequence alignments for objective, comparative studies of alignment algorithms. The alignments are constructed based on 3D structure superposition and manually refined to ensure alignment of important functional residues. A number of subsets are defined covering many of the most important problems encountered when aligning real sets of proteins. It is specifically designed to serve as an evaluation resource to address all the problems encountered when aligning complete sequences. The first release provided sets of reference alignments dealing with the problems of high variability, unequal repartition and large N/C-terminal extensions and internal insertions. Version 2.0 of the database incorporates three new reference sets of alignments containing structural repeats, trans-membrane sequences and circular permutations to evaluate the accuracy of detection/prediction and alignment of these complex sequences. Within the resource, users can look at a list of all the alignments, download the whole database by ftp, get the "c" program to compare a test alignment with the BAliBASE reference (The source code for the program is freely available), or look at the results of a comparison study of several multiple alignment programs, using BAliBASE reference sets.

UNC Dataverse

University of North Carolina Dataverse

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UNC Dataverse is an open-source repository software application for archiving, sharing, and accessing research data of all kinds. Each dataverse within the larger repository contains a multitude of datasets, and each dataset contains descriptive metadata and data files. UNC Dataverse is hosted by Odum Institute for Research in Social Science.