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Found 30 result(s)

Stanford Microarray Database

SMD

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>>>!!!<<< SMD has been retired. After approximately fifteen years of microarray-centric research service, the Stanford Microarray Database has been retired. We apologize for any inconvenience; please read below for possible resolutions to your queries. If you are looking for any raw data that was directly linked to SMD from a manuscript, please search one of the public repositories. NCBI Gene Expression Omnibus EBI ArrayExpress All published data were previously communicated to one (or both) of the public repositories. Alternatively, data for publications between 1997 and 2004 were likely migrated to the Princeton University MicroArray Database, and are accessible there. If you are looking for a manuscript supplement (i.e. from a domain other than smd.stanford.edu), perhaps try searching the Internet Archive: Wayback Machine https://archive.org/web/ . >>>!!!<<< The Stanford Microarray Database (SMD) is a DNA microarray research database that provides a large amount of data for public use.

Collaborative Research Centre Transregio 228 Database

TRR228DB

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The TRR228DB is the project-database of the Collaborative Research Centre 228 "Future Rural Africa: Future-making and social-ecological transformation" (CRC/Transregio 228, https://www.crc228.de) funded by the German Research Foundation (DFG, German Research Foundation – Project number 328966760). The project-database is a new implementation of the TR32DB and online since 2018. It handles all data including metadata, which are created by the involved project participants from several institutions (e.g. Universities of Cologne and Bonn) and research fields (e.g. anthropology, agroeconomics, ecology, ethnology, geography, politics and soil sciences). The data is resulting from several field campaigns, interviews, surveys, remote sensing, laboratory studies and modelling approaches. Furthermore, outcomes of the scientists such as publications, conference contributions, PhD reports and corresponding images are collected.

Nightingale Open Science

NGSCI

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Nightingale Open Science creates rich clinical datasets, linking imaging and waveforms to key health outcomes, and make them available to researchers, teachers, and learners around the world.

NMRshiftDB

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nmrshiftdb is a NMR database (web database) for organic structures and their nuclear magnetic resonance (nmr) spectra. It allows for spectrum prediction (13C, 1H and other nuclei) as well as for searching spectra, structures and other properties. Last not least, it features peer-reviewed submission of datasets by its users. The nmrshiftdb2 software is open source, the data is published under an open content license. Please consult the documentation for more detailed information. nmrshiftdb2 is the continuation of the NMRShiftDB project with additional data and bugfixes and changes in the software.

Inspire-HEP

Inspire-High Energy Physics

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CERN, DESY, Fermilab and SLAC have built the next-generation High Energy Physics (HEP) information system, INSPIRE. It combines the successful SPIRES database content, curated at DESY, Fermilab and SLAC, with the Invenio digital library technology developed at CERN. INSPIRE is run by a collaboration of CERN, DESY, Fermilab, IHEP, IN2P3 and SLAC, and interacts closely with HEP publishers, arXiv.org, NASA-ADS, PDG, HEPDATA and other information resources. INSPIRE represents a natural evolution of scholarly communication, built on successful community-based information systems, and provides a vision for information management in other fields of science.

SumsDB

Surface management system database

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<<!! checked 20.03.2017 SumsDB was offline; for more information and archive see http://brainvis.wustl.edu/sumsdb/ >> SumsDB (the Surface Management System DataBase) is a repository of brain-mapping data (surfaces & volumes; structural & functional data) from many laboratories.

Ensembl Plants

e!EnsemblPlants

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EnsemblPlants is a genome-centric portal for plant species. Ensembl Plants is developed in coordination with other plant genomics and bioinformatics groups via the EBI's role in the transPLANT consortium.

D-PLACE

Database of Places, Language, Culture and Environment

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D-PLACE contains cultural, linguistic, environmental and geographic information for over 1400 human ‘societies’. A ‘society’ in D-PLACE represents a group of people in a particular locality, who often share a language and cultural identity. All cultural descriptions are tagged with the date to which they refer and with the ethnographic sources that provided the descriptions. The majority of the cultural descriptions in D-PLACE are based on ethnographic work carried out in the 19th and early-20th centuries (pre-1950).

eLaborate

Huygens ING: eLaborate

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eLaborate is an online work environment in which scholars can upload scans, transcribe and annotate text, and publish the results as on online text edition which is freely available to all users. Short information about and a link to already published editions is presented on the page Editions under Published. Information about editions currently being prepared is posted on the page Ongoing projects. The eLaborate work environment for the creation and publication of online digital editions is developed by the Huygens Institute for the History of the Netherlands of the Royal Netherlands Academy of Arts and Sciences. Although the institute considers itself primarily a research facility and does not maintain a public collection profile, Huygens ING actively maintains almost 200 digitally available resource collections.

Humanitarian Data Exchange

HDX

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The Humanitarian Data Exchange (HDX) is an open platform for sharing data across crises and organisations. Launched in July 2014, the goal of HDX is to make humanitarian data easy to find and use for analysis. HDX is managed by OCHA's Centre for Humanitarian Data, which is located in The Hague. OCHA is part of the United Nations Secretariat and is responsible for bringing together humanitarian actors to ensure a coherent response to emergencies. The HDX team includes OCHA staff and a number of consultants who are based in North America, Europe and Africa.

USGS National Water Information System

NWIS

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Central data management of the USGS for water data that provides access to water-resources data collected at approximately 1.5 million sites in all 50 States, the District of Columbia, Puerto Rico, the Virgin Islands, Guam, American Samoa and the Commonwealth of the Northern Mariana Islands. Includes data on water use and quality, groundwater, and surface water.

Canadian Open Neuroscience Platform Portal

CONP

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The CONP portal is a web interface for the Canadian Open Neuroscience Platform (CONP) to facilitate open science in the neuroscience community. CONP simplifies global researcher access and sharing of datasets and tools. The portal internalizes the cycle of a typical research project: starting with data acquisition, followed by processing using already existing/published tools, and ultimately publication of the obtained results including a link to the original dataset. From more information on CONP, please visit https://conp.ca

Banco de Información para la Investigación Aplicada en Ciencias Sociales, Repositorio Institucional

BIIACS

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

CORA. Repositori de Dades de Recerca

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The CORA. Repositori de dades de Recerca is a repository of open, curated and FAIR data that covers all academic disciplines. CORA. Repositori de dades de Recerca is a shared service provided by participating Catalan institutions (Universities and CERCA Research Centers). The repository is managed by the CSUC and technical infrastructure is based on the Dataverse application, developed by international developers and users led by Harvard University (https://dataverse.org).

<odesi>

Initiative ontarienne en matière de documentation des données, de service d'extraction et d'infrastructure

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<odesi> is a digital repository for social science data, including polling data. Data collections are: Statistics Canada, Canadian Gallup Polls, CORA - Canadian Opinion Research Archive, ICPSR - Interuniversity Consortium for Political and Social Research.

Collaborative Research Centre Transregio 32 Database

TR32DB

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In the framework of the Collaborative Research Centre/Transregio 32 ‘Patterns in Soil-Vegetation-Atmosphere Systems: Monitoring, Modelling, and Data Assimilation’ (CRC/TR32, www.tr32.de), funded by the German Research Foundation from 2007 to 2018, a RDM system was self-designed and implemented. The so-called CRC/TR32 project database (TR32DB, www.tr32db.de) is operating online since early 2008. The TR32DB handles all data including metadata, which are created by the involved project participants from several institutions (e.g. Universities of Cologne, Bonn, Aachen, and the Research Centre Jülich) and research fields (e.g. soil and plant sciences, hydrology, geography, geophysics, meteorology, remote sensing). The data is resulting from several field measurement campaigns, meteorological monitoring, remote sensing, laboratory studies and modelling approaches. Furthermore, outcomes of the scientists such as publications, conference contributions, PhD reports and corresponding images are collected in the TR32DB.

InGeoCloudS

Inspired GEOdata CLOUD Services

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<<<!!!<<< The repository is no longer available. Information about the project see https://www.pole-inside.fr/en/page/ingeoclouds or https://www.eurogeosurveys.org/projects/ingeoclouds/>>>!!!>>>

Kinetic models of biological systems

KiMoSys

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KiMoSys, a web application for quantitative KInetic MOdels of biological SYStems. Kinetic models, with the aim to understand and subsequently design the metabolism of organism of interest are constructed iteratively and require accurate experimental data for both the generation and verification of hypotheses. Therefore, there is a growing requirement for exchanging experimental data and models between the systems biology community, and to automate as much as possible the kinetic model building, editing, simulation and analysis steps.

Pathogen Portal

the Bioinformatics Resource Centers Portal

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Pathogen Portal is a repository linking to the Bioinformatics Resource Centers (BRCs) sponsored by the National Institute of Allergy and Infectious Diseases (NIAID) and maintained by The Virginia Bioinformatics Institute. The BRCs are providing web-based resources to scientific community conducting basic and applied research on organisms considered potential agents of biowarfare or bioterrorism or causing emerging or re-emerging diseases. The Pathogen Portal supports and links to five Bioinformatics Resource Centers (BRCs). Each BRC specializes in a different group of pathogens, focusing on, but not limited to, pathogens causing (Re-)Emerging Infectious Diseases, and those in the NIAID Category A-C Priority Pathogen lists for biodefense research. The scope of the BRCs also includes Invertebrate Vectors of Human Disease. Pathogen Portal covers EuPathDB, IRD, PATRIC, VectorBase and ViPR.

CERN Open Data

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The CERN Open Data portal is the access point to a growing range of data produced through the research performed at CERN. It disseminates the preserved output from various research activities, including accompanying software and documentation which is needed to understand and analyze the data being shared.

Discover

UB Discover

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Discover provides access to research data from projects related to LMU Munich, which are stored and preserved in repositories of the University Library LMU.

Open Exoplanet Catalogue

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The Open Exoplanet Catalogue is a catalogue of all discovered extra-solar planets. It is a new kind of astronomical database. It is decentralized and completely open. We welcome contributions and corrections from both professional astronomers and the general public.

WASCAL Data Discovery Portal

WADI - Data Portal

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Within WASCAL a large number of heterogeneous data are collected. These data are mainly coming from different initiated research activities within WASCAL (Core Research Program, Graduate School Program) from the hydrological-meteorological, remote sensing, biodiversity and socio economic observation networks within WASCAL, and from the activities of the WASCAL Competence Center in Ouagadougou, Burkina-Faso.

Data.gov

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Data.gov increases the ability of the public to easily find, download, and use datasets that are generated and held by the Federal Government. Data.gov provides descriptions of the Federal datasets (metadata), information about how to access the datasets, and tools that leverage government datasets

PRoteomics IDEntifications Database

PRIDE

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The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE encourages and welcomes direct user submissions of mass spectrometry data to be published in peer-reviewed publications.