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Found 684 result(s)

Open-source Scientific Software and Service Repository

OSSR

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The ESCAPE Open-source Scientific Software and Service Repository (OSSR) is a sustainable open-access repository to share scientific software, services and datasets to the astro-particle-physics-related communities and enable open science. It is built as a curated Zenodo community (https://zenodo.org/communities/escape2020) integrated with several tools to enable a complete software life-cycle. The ESCAPE Zenodo community welcomes entries that support the software and service projects in the OSSR such as user-support documentation, tutorials, presentations and training activities. It also encourages the archival of documents and material that disseminate and support the goals of ESCAPE.

RENAG-DC

REseau NAtional GNSS permanent

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Within the RESIF-EPOS observation research infrastructure and the Action Spécifique RESIF-GNSS action, the Reseau National GNSS permanent (RENAG) is the network of GNSS observation stations of French universities and research organizations. It is currently composed of 85 GNSS stations (Global Navigation Satellite System such as GPS, GLONASS, Galileo). The scientific objectives of RESIF-RENAG range from the quantification of the slow deformation in France to the sounding of the atmosphere (troposphere and ionosphere), through the measurement of sea-level variations and the characterization of transient movements related to overloads. Data production is carried out in a distributed way by the laboratories and organizations that manage the stations. 12 teams are specifically in charge of station maintenance and of accurately filling in the metadata files. A single data center, RENAG-DC, hosted at the Observatoire de la Côte d'Azur (OCA) within the Geoazur laboratory, is in charge of data management, from their collection to their distribution in the standard RINEX format (http://renag.resif.fr).

ScienceRepository

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Multidisciplinary research data repository, hosted by DTU, the Danish Technical University.

OSF - Vrije Universiteit Amsterdam

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A Research Data Management Tool for the Vrije Universiteit Amsterdam Research Community.

SLAPIS

SLAPIS Early Warning System

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SLAPIS is an integrated Flood Early Warning System that aims to promote decision-making and behavioral changes from reactive to proactive at several levels, from the community to the administration, for the reduction of flood risk in the Communes of the Sirba (main tributary of the Niger River and cause of the main floods in the region)

MetabolomeXchange

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MetabolomeXchange.org delivers the mechanisms needed for disseminating the data to the metabolomics community at large (both metabolomics researchers and databases). The main objective is to make it easier for metabolomics researchers to become aware of newly released, publicly available, metabolomics datasets that may be useful for their research. MetabolomeXchange contains datasets from different data providers: MetaboLights, Metabolomic Repository Bordeaux, Metabolomics Workbench, and Metabolonote

NIH 3D Print Exchange

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The NIH 3D Print Exchange (the “Exchange”) is an open, comprehensive, and interactive website for searching, browsing, downloading, and sharing biomedical 3D print files, modeling tutorials, and educational material. "Biomedical" includes models of cells, bacteria, or viruses, molecules like proteins or DNA, and anatomical models of organs, tissue, and body parts. The NIH 3D Print Exchange provides models in formats that are readily compatible with 3D printers, and offers a unique set of tools to create and share 3D-printable models related to biomedical science.

ATCC Genome Portal

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Database and knowledgebase of authenticated microbial genomics data with full data provenance to physical materials held within American Type Culture Collection's (ATCC) biorepository and culture collections. Data includes whole genome sequencing data for bacterial, viral and fungal strains at ATCC, their genome assemblies, metadata, drug susceptibility data, and more. All data is freely available for non-commercial research use only (RUO) applications via the web portal interface or via a REST-API. The goal is to provide the research community with provenance information and authentication between the biological source materials and reference genome assemblies derived from them.

SPARC Portal

Stimulating Peripheral Activity to Relieve Conditions

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The overall vision for the SPARC Portal is to accelerate autonomic neuroscience research and device development by providing access to digital resources that can be shared, cited, visualized, computed, and used for virtual experimentation.

Mutant Mouse Resource & Research Centers

MMRRC

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The MMRRC is the nation’s premier national public repository system for mutant mice. Funded by the NIH continuously since 1999, the MMRRC archives and distributes scientifically valuable spontaneous and induced mutant mouse strains and ES cell lines for use by the biomedical research community. The MMRRC consists of a national network of breeding and distribution repositories and an Informatics Coordination and Service Center located at 4 major academic centers across the nation. The MMRRC is committed to upholding the highest standards of experimental design and quality control to optimize the reproducibility of research studies using mutant mice.

protocols.io

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A secure platform for developing and sharing reproducible methods. A research protocol is a document that describes the background, rationale, objectives, design, methodology, statistical considerations, and organization of a clinical research project.

IPGP Data Center

Centre de Données IPGP

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The main mission of IPGP Data Center is to manage and to distribute geophysical data from the Institut de physique du globe de Paris to support the geophysical research community.

DOREL

DOnnées de la REcherche Lorraines

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The institutional data repository DOREL - DOnnées de REcherche Lorraines - is a tool for referencing the scientific production of the University of Lorraine as well as a space for publishing data sets produced within its research units. It is a multidisciplinary repository, developed with the Dataverse software.

GeneLab

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GeneLab is an interactive, open-access resource where scientists can upload, download, store, search, share, transfer, and analyze omics data from spaceflight and corresponding analogue experiments. Users can explore GeneLab datasets in the Data Repository, analyze data using the Analysis Platform, and create collaborative projects using the Collaborative Workspace. GeneLab promises to facilitate and improve information sharing, foster innovation, and increase the pace of scientific discovery from extremely rare and valuable space biology experiments. Discoveries made using GeneLab have begun and will continue to deepen our understanding of biology, advance the field of genomics, and help to discover cures for diseases, create better diagnostic tools, and ultimately allow astronauts to better withstand the rigors of long-duration spaceflight. GeneLab helps scientists understand how the fundamental building blocks of life itself – DNA, RNA, proteins, and metabolites – change from exposure to microgravity, radiation, and other aspects of the space environment. GeneLab does so by providing fully coordinated epigenomics, genomics, transcriptomics, proteomics, and metabolomics data alongside essential metadata describing each spaceflight and space-relevant experiment. By carefully curating and implementing best practices for data standards, users can combine individual GeneLab datasets to gain new, comprehensive insights about the effects of spaceflight on biology. In this way, GeneLab extends the scientific knowledge gained from each biological experiment conducted in space, allowing scientists from around the world to make novel discoveries and develop new hypotheses from these priceless data.

Datenrechercheportal UFZ

Data Investigation Portal UFZ

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The data repository of the Helmholtz Centre for Environmental Research. The Data Investigation Portal (DRP) provides the opportunity to publicly access the administered data in the Data Management Portal and search them. The presentation is here limited to metadata and non-restricted information. DRP users can thus gain an overview of the data sets and, if necessary, contact the author to gain access to the data.

Cefas Data Hub

Cefas Data Portal

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The Centre for the Environment, Fisheries and Aquaculture Science (Cefas), as one of the world's longest-established marine research organisations, has provided advice on the sustainable exploitation of marine resources since 1902. Today Cefas works in support of a healthy environment and a growing blue economy providing innovative solutions for the aquatic environment, biodiversity and food security. The Cefas Data Hub provides access to over 2080 metadata records, with over 5500 data sets available to download and connect to in support of commitments to Open Science through the Data Portal. Datasets available are increasingly diverse and include many legacy datasets including those from fish, shellfish and plankton surveys from the 1980's to the present day. Other increasingly international datasets made available include species migration data from tagging activities and data on habitat and sediment, ecosystem change, human activities including marine litter, otolith sampling and fish stomach contents, oceanography, acoustics, health and water quality. Data is provided under Open Government License by default where feasible.

govinfo

U.S. Government Information

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GPO’s govinfo system is an ISO 16363 certified Trustworthy Digital Repository that ensures free online access to current and historical information from all three branches of the United States Federal Government today and into the future.

bio.tools

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bio.tools is a software registry for bioinformatics and the life sciences.

Clinical Research Metadata Repository

ECRIN MDR

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The MDR harvests metadata on data objects from a variety of sources within clinical research (e.g. trial registries, data repositories) and brings that together in a single searchable portal. The metadata is concerned with discoverability, access and provenance of the data objects (which because the data may be sensitive will often be available under a controlled access regime). At the moment (01/2021) the MDR obtains study data from: Clinical Trials.gov (CTG), The European Clinical Trials Registry (EUCTR), ISRCTN, The WHO ICTRP

Middlesex University Research Data Repository

Middlesex University Figshare

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Research Data Repository for Middlesex University, London, UK

Signaling Pathways Project

SSP

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The goal of the Signaling Pathways Project knowledgebase is to allow bench researchers to routinely ask sophisticated questions of the universe of multi-omics data points generated by the cellular signaling community. SPP is dedicated to helping researchers to make sense of the often overwhelming volume of multi-omics information in the field of cellular signaling.

DANDI

Distributed Archives for Neurophysiology Data Integration

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The US BRAIN Initiative archive for publishing and sharing neurophysiology data including electrophysiology, optophysiology, and behavioral time-series, and images from immunostaining experiments.

Addis Ababa University Research Data Repository

AAU-Research Data Repository

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Addis Ababa University Research Data Repository holds multi disciplinary datasets produced by members of the university.

GNS Science Dataset Catalogue

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The purpose of the Dataset Catalogue is to enhance discovery of GNS Science datasets. At a minimum, users will be able to determine whether a dataset on a specific topic exists and then whether it pertains to a specific place and/or a specific date or period. Some datasets include a web link to an online resource. In addition, contact details are provided for the custodian of each dataset as well as conditions of use.

ArkeoGIS

ArkeoGIS

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ArkeoGIS is a unified scientific data publishing platform. It is a multilingual Geographic Information System (GIS), initially developed in order to mutualize archaeological and paleoenvironmental data of the Rhine Valley. Today, it allows the pooling of spatialized scientific data concerning the past, from prehistory to the present day. The databases come from the work of institutional researchers, doctoral students, master students, private companies and archaeological services. They are stored on the TGIR Huma-Num service grid and archived as part of the Huma-Num/CINES long-term archiving service. Because of their sensitive nature, which could lead to the looting of archaeological deposits, access to the tool is reserved to archaeological professionals, from research institutions or non-profit organizations. Each user can query online all or part of the available databases and export the results of his query to other tools.