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Found 112 result(s)
<<<!!!<<< The repository is no longer available. 2018-11-20; COMPASS used to be provided and available at FORS but is no longer supported. >>>!!!>>>
<<<!!!<<< The pages were merged. Please use "Forschungsdaten- und Servicezentrum der Bundesbank" https://www.re3data.org/repository/r3d100012252 >>>!!!<<<
HELIX DATA is an integral component of the Hellenic Data Service "HELIX" supporting knowledge management and scholarly communication in Greece. HELIX DATA is the data catalogue and repository, with a dual role to store and preserve data that are self-deposited by researchers as well as to harvest data records from other national data sources and catalogues.
Data repository of a meteorological experiment conducted in Perdigão, Portugal between December 15, 2016 to June 15, 2017. The Perdigao field project is part of a larger joint US/European multi-year program in Portugal. The project is partially funded by the European Union (EU) ERANET+ to provide the wind energy sector with more detailed resource mapping capabilities in the form of a new digital EU wind atlas. A major goal of the Perdigão field project is to quantify errors of wind resource models against a benchmark dataset collected in complex terrain. The US participation will complement this activity by identifying physical and numerical weaknesses of models and developing new knowledge and methods to overcome such deficiencies.
The Ontology Lookup Service (OLS) is a repository for biomedical ontologies that aims to provide a single point of access to the latest ontology versions. The user can browse the ontologies through the website as well as programmatically via the OLS API. The OLS provides a web service interface to query multiple ontologies from a single location with a unified output format.The OLS can integrate any ontology available in the Open Biomedical Ontology (OBO) format. The OLS is an open source project hosted on Google Code.
The HUGO Gene Nomenclature Committee (HGNC) assigned unique gene symbols and names to over 35,000 human loci, of which around 19,000 are protein coding. This curated online repository of HGNC-approved gene nomenclature and associated resources includes links to genomic, proteomic and phenotypic information, as well as dedicated gene family pages.
The Endangered Languages Archive (ELAR) is a digital repository for preserving multimedia collections of endangered languages from all over the world, making them available for future generations. In ELAR’s collections you can find recordings of every-day conversations, instructions on how to build fish traps or boats, explanations of kinship systems and the use of medicinal plants, and learn about art forms like string figures and sand drawings. ELAR’s collections are unique records of local knowledge systems encoded in their languages, described by the holders of the knowledge themselves.
ForestPlots.net is a web-accessible secure repository for forest plot inventories in South America, Africa and Asia. The database includes plot geographical information; location, taxonomic information and diameter measurements of trees inside each plot; and participants in plot establishment and re-measurement, including principal investigators, field assistants, students.
MGnify (formerly: EBI Metagenomics) offers an automated pipeline for the analysis and archiving of microbiome data to help determine the taxonomic diversity and functional & metabolic potential of environmental samples. Users can submit their own data for analysis or freely browse all of the analysed public datasets held within the repository. In addition, users can request analysis of any appropriate dataset within the European Nucleotide Archive (ENA). User-submitted or ENA-derived datasets can also be assembled on request, prior to analysis.
The Arctic Permafrost Geospatial Centre (APGC) is an Open Access Circum-Arctic Geospatial Data Portal that promotes, describes and visualizes geospatial permafrost data. A data catalogue and a WebGIS application allow to easily discover and view data and metadata. Data can be downloaded directly via link to the publishing data repository.
The Cancer Immunome Database (TCIA) provides results of comprehensive immunogenomic analyses of next generation sequencing data (NGS) data for 20 solid cancers from The Cancer Genome Atlas (TCGA) and other datasource. The Cancer Immunome Atlas (TCIA) was developed and is maintained at the Division of Bioinformatics (ICBI). The database can be queried for the gene expression of specific immune-related gene sets, cellular composition of immune infiltrates (characterized using gene set enrichment analyses and deconvolution), neoantigens and cancer-germline antigens, HLA types, and tumor heterogeneity (estimated from cancer cell fractions). Moreover it provides survival analyses for different types immunological parameters. TCIA will be constantly updated with new data and results.
The Language Archive Cologne (LAC) is a research data repository for the linguistics and all humanities disciplines working with audiovisual data. The archive forms a cluster of the Data Center for Humanities in cooperation with the Institute of Linguistics of the University of Cologne. The LAC is an archive for language resources, which is freely available via a web-based access. In addition, concrete technical and methodological advice is offered in the research data cycle - from the collection of the data, their preparation and archiving, to publication and reuse.
Iceland joined CLARIN ERIC on February 1st, 2020, after having been an observer since November 2018. The Ministry of Education, Science and Culture assigned The Árni Magnússon Institute for Icelandic Studies the role of leading partner in the Icelandic National Consortium and appointed Professor Emeritus Eiríkur Rögnvaldsson as National Coordinator, later replaced by Starkaður Barkarson, a project manager at The Árni Magnússon Institute. Most of the relevant institutions participate in the CLARIN-IS National Consortium. The Árni Magnússon Institute has already established a Metadata Providing Centre (CLARIN C-Centre) which hosts metadata for Icelandic language resources and makes them available through the Virtual Language Observatory. The aim is to establish a Service Providing Centre (CLARIN B-Centre) which will provide both service and access to resources and knowledge.
The CERN Open Data portal is the access point to a growing range of data produced through the research performed at CERN. It disseminates the preserved output from various research activities, including accompanying software and documentation which is needed to understand and analyze the data being shared.
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The Berlin-Brandenburg Academy of Sciences and Humanities (BBAW) is a CLARIN partner institution and has been an officially certified CLARIN service center since June 20th, 2013. The CLARIN center at the BBAW focuses on historical text corpora (predominantly provided by the 'Deutsches Textarchiv'/German Text Archive, DTA) as well as on lexical resources (e.g. dictionaries provided by the 'Digitales Wörterbuch der Deutschen Sprache'/Digital Dictionary of the German Language, DWDS).
B2SAFE is a robust, safe and highly available service which allows community and departmental repositories to implement data management policies on their research data across multiple administrative domains in a trustworthy manner. A solution to: provide an abstraction layer which virtualizes large-scale data resources, guard against data loss in long-term archiving and preservation, optimize access for users from different regions, bring data closer to powerful computers for compute-intensive analysis
The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE encourages and welcomes direct user submissions of mass spectrometry data to be published in peer-reviewed publications.
<<<!!!<<< Phasing out support for the Database of Genomic Variants archive (DGVa). The submission, archiving, and presentation of structural variation services offered by the DGVa is transitioning to the European Variation Archive (EVA) https://www.re3data.org/repository/r3d100011553. All of the data shown in the DGVa website is already searchable and browsable from the EVA Study Browser. Submission of structural variation data to EVA is done using the VCF format. The VCF specification allows representing multiple types of structural variants such as insertions, deletions, duplications and copy-number variants. Other features such as symbolic alleles, breakends, confidence intervals etc., support more complex events, such as translocations at an imprecise position. >>>!!!>>>
The UniProt Knowledgebase (UniProtKB) is the central hub for the collection of functional information on proteins, with accurate, consistent and rich annotation. In addition to capturing the core data mandatory for each UniProtKB entry (mainly, the amino acid sequence, protein name or description, taxonomic data and citation information), as much annotation information as possible is added. This includes widely accepted biological ontologies, classifications and cross-references, and clear indications of the quality of annotation in the form of evidence attribution of experimental and computational data. The Universal Protein Resource (UniProt) is a comprehensive resource for protein sequence and annotation data. The UniProt databases are the UniProt Knowledgebase (UniProtKB), the UniProt Reference Clusters (UniRef), and the UniProt Archive (UniParc). The UniProt Metagenomic and Environmental Sequences (UniMES) database is a repository specifically developed for metagenomic and environmental data. The UniProt Knowledgebase,is an expertly and richly curated protein database, consisting of two sections called UniProtKB/Swiss-Prot and UniProtKB/TrEMBL.
<<<!!!<<< This repository is no longer available. >>>!!!>>> BioVeL is a virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. BioVeL supports the development and use of workflows to process data. It offers the possibility to either use already made workflows or create own. BioVeL workflows are stored in MyExperiment - Biovel Group http://www.myexperiment.org/groups/643/content. They are underpinned by a range of analytical and data processing functions (generally provided as Web Services or R scripts) to support common biodiversity analysis tasks. You can find the Web Services catalogued in the BiodiversityCatalogue.