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Found 135 result(s)

India Water Portal

IWP

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The India Water Portal is a web-based platform for sharing water management knowledge in India amongst practitioners and the general public. The included datasets can be browsed by data type, location, time, and other metadata. Data include rainfall, watersheds, groundwater, water quality, and irrigation.

WestNile.ca.gov

California West Nile Virus Website

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The website for West Nile Virus education, statistics, and dead bird reporting for California.

Center for Operational Oceanographic Products and Services

Tides and Currents

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The Center for Operational Oceanographic Products and Services (CO-OPS) site offers operational data in near-real time and historic contexts. Focus is on tides and currents but also includes information on harmful algal blooms and weather, etc. Data access is made possible through geopspatial web interfaces as well as OPeNDAP services, etc.

Seafloor Sediments Data Collection

SEDCORE 2000

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Seafloor Sediments Data Collection is a collection of more than 14,000 archived marine geological samples recovered from the seafloor. The inventory includes long, stratified sediment cores, as well as rock dredges, surface grabs, and samples collected by the submersible Alvin.

Expressed Sequence Tags database

dbEST

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dbEST is a division of GenBank that contains sequence data and other information on "single-pass" cDNA sequences, or "Expressed Sequence Tags", from a number of organisms. Expressed Sequence Tags (ESTs) are short (usually about 300-500 bp), single-pass sequence reads from mRNA (cDNA). Typically they are produced in large batches. They represent a snapshot of genes expressed in a given tissue and/or at a given developmental stage. They are tags (some coding, others not) of expression for a given cDNA library. Most EST projects develop large numbers of sequences. These are commonly submitted to GenBank and dbEST as batches of dozens to thousands of entries, with a great deal of redundancy in the citation, submitter and library information. To improve the efficiency of the submission process for this type of data, we have designed a special streamlined submission process and data format. dbEST also includes sequences that are longer than the traditional ESTs, or are produced as single sequences or in small batches. Among these sequences are products of differential display experiments and RACE experiments. The thing that these sequences have in common with traditional ESTs, regardless of length, quality, or quantity, is that there is little information that can be annotated in the record. If a sequence is later characterized and annotated with biological features such as a coding region, 5'UTR, or 3'UTR, it should be submitted through the regular GenBank submissions procedure (via BankIt or Sequin), even if part of the sequence is already in dbEST. dbEST is reserved for single-pass reads. Assembled sequences should not be submitted to dbEST. GenBank will accept assembled EST submissions for the forthcoming TSA (Transcriptome Shotgun Assembly) division. The individual reads which make up the assembly should be submitted to dbEST, the Trace archive or the Short Read Archive (SRA) prior to the submission of the assemblies.

USDA Economics, Statistics and Market Information System

ESMIS

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The USDA Economics, Statistics and Market Information System contains reports and datasets of multiple agencies within the United States Department of Agriculture, including the Agricultural Marketing Service, the Economic Research Service, the Foreign Agricultural Service, the National Agricultural Statistics Service, and the World Agricultural Outlook Board. Historical and current reports and datasets are included.

Metropolitan Travel Survey Archive

MTSA

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The Metropolitan Travel Survey Archive (MTSA) includes travel surveys from numerous public agencies across the United States. The Transportation Secure Data Center has archived these surveys to ensure their continued public availability. The survey data have been converted to a standard file format and cleansed to remove personally identifiable information, including any detailed spatial data regarding individual trips.

Western Regional Climate Center

WRCC

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Western Regional Climate Center (WRCC) provides historical and current climate data for the western United States. WRCC is one of six regional climate centers partnering with NOAA research institutes to promote climate research and data stewardship.

EMBL-EBI

European Molecular Biology Laboratory - European Bioinformatics Institute

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The European Bioinformatics Institute (EBI) has a long-standing mission to collect, organise and make available databases for biomolecular science. It makes available a collection of databases along with tools to search, download and analyse their content. These databases include DNA and protein sequences and structures, genome annotation, gene expression information, molecular interactions and pathways. Connected to these are linking and descriptive data resources such as protein motifs, ontologies and many others. In many of these efforts, the EBI is a European node in global data-sharing agreements involving, for example, the USA and Japan.

Avibase

the world bird database

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Avibase is an extensive database information system about all birds of the world, containing over 60 million records about 10,000 species and 22,000 subspecies of birds, including distribution information, taxonomy, synonyms in several languages and more. This site is managed by Denis Lepage and hosted by Bird Studies Canada, the Canadian copartner of Birdlife International. Avibase has been a work in progress since 1992 and I am now pleased to offer it as a service to the bird-watching and scientific community.

ArachnoServer

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ArachnoServer is a manually curated database containing information on the sequence, three-dimensional structure, and biological activity of protein toxins derived from spider venom. Spiders are the largest group of venomous animals and they are predicted to contain by far the largest number of pharmacologically active peptide toxins (Escoubas et al., 2006). ArachnoServer has been custom-built so that a wide range of biological scientists, including neuroscientists, pharmacologists, and toxinologists, can readily access key data relevant to their discipline without being overwhelmed by extraneous information.

International Mouse Strain Resource

IMSR

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The IMSR is a searchable online database of mouse strains, stocks, and mutant ES cell lines available worldwide, including inbred, mutant, and genetically engineered strains. The goal of the IMSR is to assist the international scientific community in locating and obtaining mouse resources for research. Note that the data content found in the IMSR is as supplied by strain repository holders. For each strain or cell line listed in the IMSR, users can obtain information about: Where that resource is available (Repository Site); What state(s) the resource is available as (e.g. live, cryopreserved embryo or germplasm, ES cells); Links to descriptive information about a strain or ES cell line; Links to mutant alleles carried by a strain or ES cell line; Links for ordering a strain or ES cell line from a Repository; Links for contacting the Repository to send a query

Expression Atlas

Gene Expression Atlas

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The Expression Atlas provides information on gene expression patterns under different biological conditions such as a gene knock out, a plant treated with a compound, or in a particular organism part or cell. It includes both microarray and RNA-seq data. The data is re-analysed in-house to detect interesting expression patterns under the conditions of the original experiment. There are two components to the Expression Atlas, the Baseline Atlas and the Differential Atlas. The Baseline Atlas displays information about which gene products are present (and at what abundance) in "normal" conditions (e.g. tissue, cell type). It aims to answer questions such as "which genes are specifically expressed in human kidney?". This component of the Expression Atlas consists of highly-curated and quality-checked RNA-seq experiments from ArrayExpress. It has data for many different animal and plant species. New experiments are added as they become available. The Differential Atlas allows users to identify genes that are up- or down-regulated in a wide variety of different experimental conditions such as yeast mutants, cadmium treated plants, cystic fibrosis or the effect on gene expression of mind-body practice. Both microarray and RNA-seq experiments are included in the Differential Atlas. Experiments are selected from ArrayExpress and groups of samples are manually identified for comparison e.g. those with wild type genotype compared to those with a gene knock out. Each experiment is processed through our in-house differential expression statistical analysis pipeline to identify genes with a high probability of differential expression.

Index to Marine & Lacustrine Geological Samples

IMLGS

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The Index to Marine and Lacustrine Geological Samples is a tool to help scientists locate and obtain geologic material from sea floor and lakebed cores, grabs, and dredges archived by participating institutions around the world. Data and images related to the samples are prepared and contributed by the institutions for access via the IMLGS and long-term archive at NGDC. Before proposing research on any sample, please contact the curator for sample condition and availability. A consortium of Curators guides the IMLGS, maintained on behalf of the group by NGDC, since 1977.

Strong Motion Virtual Data Center

Strong Motion VDC

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The VDC is a public, web-based search engine for accessing worldwide earthquake strong ground motion data. While the primary focus of the VDC is on data of engineering interest, it is also an interactive resource for scientific research and government and emergency response professionals.

DTU Bioinformatics

Center for Biological Sequence Analysis (formerly)

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<<<!!!<<< DTU Bioinformatics was closed on 31 December 2018 as part of a reorganization at DTU >>>!!!>>>

JASPAR

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JASPAR is the leading open-access database of matrix profiles describing the DNA-binding patterns of transcription factors and other proteins interacting with DNA in a sequence-specific manner.

NOAA's climate data record program

Climate data record program

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Climate Data Record (CDR) is a time series of measurements of sufficient length, consistency and continuity to determine climate variability and change. The fundamental CDRs include sensor data, such as calibrated radiances and brightness temperatures, that scientists have improved and quality-controlled along with the data used to calibrate them. The thematic CDRs include geophysical variables derived from the fundamental CDRs, such as sea surface temperature and sea ice concentration, and they are specific to various disciplines.

Bugwood Image Database System

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bugwood.org is the host website of the Center for Invasive Species and Ecosystem Health at the University of Georgia (Formerly: Bugwood Network). The Center aims to develop, consolidate and disseminate information and programmes focused on invasive species, forest health, natural resources and agricultural management through technology development, programmes implementation, training, applied research and public awareness at state, regional, national and international levels. The site gives details of its products (Bugwood Image Database; Early Detection and Distribution Mapping and Bugwoodwiki). Details of its projects, services and personnel are provided. Users can also access image databases on Forestry, Insects, IPM, Invasive Species, Forest Pests, weed and Bark Beetle.

Norwegian Marine Data Center

Norsk marint datasenter

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The Norwegian Marine Data Centre (NMD) at the Institute of Marine Research was established as a national data centre dedicated to the professional processing and long-term storage of marine environmental and fisheries data and production of data products. The Institute of Marine Research continuously collects large amounts of data from all Norwegian seas. Data are collected using vessels, observation buoys, manual measurements, gliders – amongst others. NMD maintains the largest collection of marine environmental and fisheries data in Norway.

HISTAT

Zeitreihen zur Historischen Statistik

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HISTAT (Historical Statistics)provides data from studies of population, economic and social history as well as the historical Statistics under a single user interface to be made available online. HISTAT offers a variety of time series, Historical Statistics primarily from Germany, partly down to the 16 . century; the database is structured theme-and study-oriented. Studies are listed by subject area and can be individually selected. using an alphabetical list of authors of individual studies can also be selected. Moreover, a study on cross Keyword is offered. HISTAT provides information and research opportunities to both study level as well as at time series level. It offered a thesaurus-based meta-search for words, authors and studies in the study descriptions, the data (time series definitions) and the sources.

Chinese Astronomical Data Center

CAsDC

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Chinese Astronomical Data Center (CAsDC) is the scientific data service and infrastructure of National Astronomical Observatories, Chinese Academy of Sciences (NAOC), which is a key service from the China-VO. We are aiming to meet user requirements for astronomical research and education. The CAsDC is based on World Data Center (WDC) for Astronomy, which is hosted at NAOC and has been providing data services to users since its initiation in 1980s. In 2012, the CAsDC became a regular member of the new created World Data System.

Alternative Fuels Data Center

AFDC

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The Alternative Fuels Data Center (AFDC) is a comprehensive clearinghouse of information about advanced transportation technologies. The AFDC offers transportation decision makers unbiased information, data, and tools related to the deployment of alternative fuels and advanced vehicles. The AFDC launched in 1991 in response to the Alternative Motor Fuels Act of 1988 and the Clean Air Act Amendments of 1990. It originally served as a repository for alternative fuel performance data. The AFDC has since evolved to offer a broad array of information resources that support efforts to reduce petroleum use in transportation. The AFDC serves Clean Cities stakeholders, fleets regulated by the Energy Policy Act, businesses, policymakers, government agencies, and the general public.

Atomic and Molecular Data Research Center

AMDRC

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>>> --- !!!! Attention: Obviously the institute does not exist any more. The links do not work anymore. !!!! --- <<< Our center is devoted to: Collection, compilation, evaluation, and dissemination of scientific information required for fusion research, and Investigation of problems arising in the course of development of fusion research. There are atomic and molecular (A & M) numerical databases and bibliographic databases on plasma physics and atomic physics.

Forschungsdatenzentrum im Bundesinstitut für Berufsbildung

bibb fdz

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BIBB has a strong tradition of survey-based research. It initiates and realises the collection of individual and firm-level data on crucial positions and transitions in the education and labour market system. The BIBB-FDZ covers a variety of data deploying different units of analysis and temporal designs and focusing on various thematic issues. Standard access to well prepared firm- and individual-level data on the attainment and utilization of vocational education and training Documentation of these data sets, i.e. a description of their central characteristics, main issues and variables, data collection, anonymisation, weighting and recoding etc. Advisory service on data choice, data access and handling, research potential and scope and validity of the data. Supply of a range of data tools such as standard measures and classifications in the fields of education, occupations, industries and regions (if possible also including cross-national fields), formally anonymous data for remote data access, or references to publications with the data.