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Found 32 result(s)

Global Biodiversity Information Facility

Data index of the Global Biodiversity Information Facility

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GBIF is an international organisation that is working to make the world's biodiversity data accessible everywhere in the world. GBIF and its many partners work to mobilize the data, and to improve search mechanisms, data and metadata standards, web services, and the other components of an Internet-based information infrastructure for biodiversity. GBIF makes available data that are shared by hundreds of data publishers from around the world. These data are shared according to the GBIF Data Use Agreement, which includes the provision that users of any data accessed through or retrieved via the GBIF Portal will always give credit to the original data publishers.

Ocean Biodiversity Information System

OBIS

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OBIS strives to document the ocean's diversity, distribution and abundance of life. Created by the Census of Marine Life, OBIS is now part of the Intergovernmental Oceanographic Commission (IOC) of UNESCO, under its International Oceanographic Data and Information Exchange (IODE) programme

ENCODE

Encyclopedia of DNA Elements

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The ENCODE Encyclopedia organizes the most salient analysis products into annotations, and provides tools to search and visualize them. The Encyclopedia has two levels of annotations: Integrative-level annotations integrate multiple types of experimental data and ground level annotations. Ground-level annotations are derived directly from the experimental data, typically produced by uniform processing pipelines.

NCBI Datasets

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NCBI Datasets is a continually evolving platform designed to provide easy and intuitive access to NCBI’s sequence data and metadata. NCBI Datasets is part of the NIH Comparative Genomics Resource (CGR). CGR facilitates reliable comparative genomics analyses for all eukaryotic organisms through an NCBI Toolkit and community collaboration.

Inspire-HEP

Inspire-High Energy Physics

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CERN, DESY, Fermilab and SLAC have built the next-generation High Energy Physics (HEP) information system, INSPIRE. It combines the successful SPIRES database content, curated at DESY, Fermilab and SLAC, with the Invenio digital library technology developed at CERN. INSPIRE is run by a collaboration of CERN, DESY, Fermilab, IHEP, IN2P3 and SLAC, and interacts closely with HEP publishers, arXiv.org, NASA-ADS, PDG, HEPDATA and other information resources. INSPIRE represents a natural evolution of scholarly communication, built on successful community-based information systems, and provides a vision for information management in other fields of science.

DataverseNO

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DataverseNO (https://dataverse.no) is a curated, FAIR-aligned national generic repository for open research data from all academic disciplines. DataverseNO commits to facilitate that published data remain accessible and (re)usable in a long-term perspective. The repository is owned and operated by UiT The Arctic University of Norway. DataverseNO accepts submissions from researchers primarily from Norwegian research institutions. Datasets in DataverseNO are grouped into institutional collections as well as special collections. The technical infrastructure of the repository is based on the open source application Dataverse (https://dataverse.org), which is developed by an international developer and user community led by Harvard University.

NeuroVault

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A place where researchers can publicly store and share unthresholded statistical maps, parcellations, and atlases produced by MRI and PET studies.

SBGrid Data Bank

Structural Biology Data Grid

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Open access to macromolecular X-ray diffraction and MicroED datasets. The repository complements the Worldwide Protein Data Bank. SBDG also hosts reference collection of biomedical datasets contributed by members of SBGrid, Harvard and pilot communities.

VertNet

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VertNet is a NSF-funded collaborative project that makes biodiversity data free and available on the web. VertNet is a tool designed to help people discover, capture, and publish biodiversity data. It is also the core of a collaboration between hundreds of biocollections that contribute biodiversity data and work together to improve it. VertNet is an engine for training current and future professionals to use and build upon best practices in data quality, curation, research, and data publishing. Yet, VertNet is still the aggregate of all of the information that it mobilizes. To us, VertNet is all of these things and more.

FactGrid

a database for historians

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FactGrid is a Wikibase instance designed to be used by historians with a focus on international projects. The database is hosted by the University of Erfurt and coordinated at the Gotha Research Centre. Partners in joint ventures are Wikimedia Germany as the software provider and the German National Library in a project to open the GND to international research.

KNMI Data Platform

formerly: KDC

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KDP has replaced the KNMI Data Centre (KDC), which was turned off on the 27th of July 2020. Not only a change of name, but also a transition to new technologies. Initially, the KDP will be more primitive than KDC. To fulfill future ambitions, a digital KNMI transformation has been initiated. Part of this transition is the development of a new KDP as a successor of the KDC. All data on the KNMI Data Platform is free to use. For some datasets a service agreement is available, which is indicated on the page of the dataset. The KNMI Data platform provides access to KNMI data on weather, climate and seismology. Here you will find KNMI data on various subjects such as the most recent 10-minute observations, historical series, data about meteorological measuring stations, model calculations, earthquake data and satellite products. In addition to KNMI datasets, we also make datasets from other parties available, such as ECMWF, ECOMET, EUMETSAT and WMO.

GabiPD

GABI Primary Database

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GABI, acronym for "Genomanalyse im biologischen System Pflanze", is the name of a large collaborative network of different plant genomic research projects. Plant data from different ‘omics’ fronts representing more than 10 different model or crop species are integrated in GabiPD.

TemplateFlow

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Reference anatomies of the brain and corresponding atlases play a central role in experimental neuroimaging workflows and are the foundation for reporting standardized results. The choice of such references —i.e., templates— and atlases is one relevant source of methodological variability across studies, which has recently been brought to attention as an important challenge to reproducibility in neuroscience. TemplateFlow is a publicly available framework for human and nonhuman brain models. The framework combines an open database with software for access, management, and vetting, allowing scientists to distribute their resources under FAIR —findable, accessible, interoperable, reusable— principles. TemplateFlow supports a multifaceted insight into brains across species, and enables multiverse analyses testing whether results generalize across standard references, scales, and in the long term, species, thereby contributing to increasing the reliability of neuroimaging results.

NIH 3D Print Exchange

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The NIH 3D Print Exchange (the “Exchange”) is an open, comprehensive, and interactive website for searching, browsing, downloading, and sharing biomedical 3D print files, modeling tutorials, and educational material. "Biomedical" includes models of cells, bacteria, or viruses, molecules like proteins or DNA, and anatomical models of organs, tissue, and body parts. The NIH 3D Print Exchange provides models in formats that are readily compatible with 3D printers, and offers a unique set of tools to create and share 3D-printable models related to biomedical science.

RADAR4Culture

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RADAR4Culture is a low-threshold and easy-to use service for sustainable publication and preservation of cultural heritage research data. It offers free publication for any data type and format according to the FAIR principles, independent of the researcher´s institutional affiliation. Through persistent identifiers (DOI) and a guaranteed retention period of at least 25 years, the research data remain available, citable and findable long-term. Currently, the offer is aimed exclusively at researchers at publicly funded research institutions and (art) universities as well as non-commercial academies, galleries, libraries, archives and museums in Germany. No contract is required and no data publication fees are charged. The researchers are responsible for the upload, organisation, annotation and curation of research data as well as the peer-review process (as an optional step) and finally their publication.

BioModels

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BioModels is a repository of mathematical models of biological and biomedical systems. It hosts a vast selection of existing literature-based physiologically and pharmaceutically relevant mechanistic models in standard formats. Our mission is to provide the systems modelling community with reproducible, high-quality, freely-accessible models published in the scientific literature.

Canadensys repository

Database of Vascular Plants of Canada

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Biological collections are replete with taxonomic, geographic, temporal, numerical, and historical information. This information is crucial for understanding and properly managing biodiversity and ecosystems, but is often difficult to access. Canadensys, operated from the Université de Montréal Biodiversity Centre, is a Canada-wide effort to unlock the biodiversity information held in biological collections.

Environmental Data Initiative Repository

EDI Data Portal

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We preserve environmental data for open and reproducible science, to promote synthesis across space and time, and to aid in the assessment of environmental change and its consequences.

Pfam Protein Families

Pfam

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<<<!!!<<< Pfam data and new releases are available through InterPro https://www.re3data.org/repository/r3d100010798 The Pfam website now serves as a static page with no data updates. All links below redirect to the closest alternative page in the InterPro website. >>>!!!>>>

CERN Open Data

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The CERN Open Data portal is the access point to a growing range of data produced through the research performed at CERN. It disseminates the preserved output from various research activities, including accompanying software and documentation which is needed to understand and analyze the data being shared.

OpenEI

OpenEnergyInfo

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The Open Energy Information (OpenEI.org) initiative is a free, open source knowledge-sharing platform created to facilitate access to data, models, tools, and information that accelerate the transition to clean energy systems through informed decisions. Sponsored by the Department of Energy, and developed by the National Renewable Energy Lab, in support of the Open Government Initiative, OpenEI strives to make energy-related data and information searchable, accessible, and useful to both people and machines

CDAWeb

Heliophysics Coordinated Data Analysis Web

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The CDAWeb data system enables improved display and coordinated analysis of multi-instrument, multimission data bases of the kind whose analysis is critical to meeting the science objectives of the ISTP program and the InterAgency Consultative Group (IACG) Solar-Terrestrial Science Initiative. The system combines the client-server user interface technology of the World Wide Web with a powerful set of customized IDL routines to leverage the data format standards (CDF) and guidelines for implementation adopted by ISTP and the IACG. The system can be used with any collection of data granules following the extended set of ISTP/IACG standards. CDAWeb is being used both to support coordinated analysis of public and proprietary data and better functional access to specific public data such as the ISTP-precursor CDAW 9 data base that is formatted to the ISTP/IACG standards. Many data sets are available through the Coordinated Data Analysis Web (CDAWeb) service and the data coverage continues to grow. These are largely, but not exclusively, magnetospheric data and nearby solar wind data of the ISTP era (1992-present) at time resolutions of approximately a minute. The CDAWeb service provides graphical browsing, data subsetting, screen listings, file creations and downloads (ASCII or CDF). Public data from current (1992-present) space physics missions (including Cluster, IMAGE, ISTP, FAST, IMP-8, SAMPEX and others). Public data from missions before 1992 (including IMP-8, ISIS1/2, Alouette2, Hawkeye and others). Public data from all current and past space physics missions. CDAWeb ist part of "Space Physics Data Facility" (https://www.re3data.org/repository/r3d100010168).

National Snow and Ice Data Center

NSIDC

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NSIDC offers hundreds of scientific data sets for research, focusing on the cryosphere and its interactions. Data are from satellites and field observations. All data are free of charge.

VecNet

Vector-Borne Disease Network

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<<<!!!<<< The repository is no longer available. 2019-09-06: no more access to VecNet >>>!!!>>>

NCBI Virus

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NCBI Virus is a community portal for viral sequence data from RefSeq, GenBank and other NCBI repositories. To find, retrieve and analyze data, choose one of the offered options.