Mammalian Transcriptomic Database

Name of repository

Mammalian Transcriptomic Database

Additional name(s)

• MTD

Repository URL

https://ngdc.cncb.ac.cn/mtd/index.php

Subject(s)

• Life Sciences
• Biology
• Basic Research in Biology and Medicine
• Cell Biology
• General Genetics and Functional Genome Biology
• Bioinformatics and Theoretical Biology

Description

MTD is focused on mammalian transcriptomes with a current version that contains data from humans, mice, rats and pigs. Regarding the core features, the MTD browses genes based on their neighboring genomic coordinates or joint KEGG pathway and provides expression information on exons, transcripts, and genes by integrating them into a genome browser. We developed a novel nomenclature for each transcript that considers its genomic position and transcriptional features.

Contact(s)

• junyu@big.ac.cn
• xiaojingfa@big.ac.cn
• https://ngdc.cncb.ac.cn/mtd/contact.php

Keyword(s)

• RNA
• RNA-seq
• Sequence Read Archive (SRA)
• cell lines
• gene expression
• genetics
• genomics
• human
• mouse
• pig
• rat
• tissues

Persistent identifier(s) of the repository

• other:https://fairsharing.org/2909
• other:OMICS_11215

Repository type(s)

• disciplinary

Mission statement for designated community

https://ngdc.cncb.ac.cn/mission

Research data repository language(s)

• English

Data and/or service provider

• dataProvider