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Found 325 result(s)

BioGRID

Biological General Repository for Interaction Datasets

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The Biological General Repository for Interaction Datasets (BioGRID) is a public database that archives and disseminates genetic and protein interaction data from model organisms and humans. BioGRID is an online interaction repository with data compiled through comprehensive curation efforts. All interaction data are freely provided through our search index and available via download in a wide variety of standardized formats.

Visual Arts Data Service

VADS

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VADS is the online resource for visual arts. It has provided services to the academic community for 12 years and has built up a considerable portfolio of visual art collections comprising over 100,000 images that are freely available and copyright cleared for use in learning, teaching and research in the UK. VADS provides: expert guidance and help for digital projects in art education; resource development and hosting for art education; project management and consultancy for art education; leadership in the innovative use of ICT in education through its research and development activities. VADS offers advice and guidance to the visual arts research, teaching and learning communities on all aspects of digital resource management from funding, through delivery and use, to preservation.

WormBase

facilitating insights into nematode biology

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Launched in 2000, WormBase is an international consortium of biologists and computer scientists dedicated to providing the research community with accurate, current, accessible information concerning the genetics, genomics and biology of C. elegans and some related nematodes. In addition to their curation work, all sites have ongoing programs in bioinformatics research to develop the next generations of WormBase structure, content and accessibility

Flytrap

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Flytrap is an interactive database for displaying gene expression patterns, in particular P[GAL4] patterns, via an intuitive WWW based interface. This development consists of two components, the first being the html interface to the database and the second, a tool-kit for constructing and maintaining the database.

Avon Longitudinal Study of Parents and Children

ALSPAC

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ALSPAC is a longitudinal birth cohort study which enrolled pregnant women who were resident in one of three Bristol-based health districts in the former County of Avon with an expected delivery date between 1st April 1991 and 31st December 1992. Around 14,000 pregnant women were initially recruited. Detailed information has been collected on these women, their partners and subsequent children using self-completion questionnaires, data extraction from medical notes, linkage to routine information systems and from hands-on research clinics. Additional cohorts of participants have since been enrolled in their own right including fathers, siblings, children of the children and grandparents of the children. Ethical approval for the study was obtained from the ALSPAC Ethics and Law Committee (IRB00003312) and Local Research Ethics.

ComBase

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ComBase is a resource for quantitative and predictive food microbiology. ComBase includes a database of observed microbial responses to a variety of food-related environments and a collection of predictive models.

British Geological Survey

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The British Geological Survey (BGS), the world’s oldest national geological survey, has over 400 datasets including environmental monitoring data, digital databases, physical collections (borehole core, rocks, minerals and fossils), records and archives.

West African Vegetation

A vegetation data network for West Africa

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This is a database for vegetation data from West Africa, i.e. phytosociological and dendrometric relevés as well as floristic inventories. The West African Vegetation Database has been developed in the framework of the projects “SUN - Sustainable Use of Natural Vegetation in West Africa” and “Biodiversity Transect Analysis in Africa” (BIOTA, https://www.biota-africa.org/).

BRC

Biological Records Centre

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The Biological Records Centre (BRC), established in 1964, is a national focus in the UK for terrestrial and freshwater species recording. BRC works closely with the voluntary recording community, principally through support of national recording schemes and societies. It provides an application, IRecord, for people to use to record and submit their own wildlife observations to the repository. Map and access datasets via the NBN Gateway, an Internet based data delivery service.

The Data Hub

datahub

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the Data Hub is a community-run catalogue of useful sets of data on the Internet. You can collect links here to data from around the web for yourself and others to use, or search for data that others have collected. Depending on the type of data (and its conditions of use), the Data Hub may also be able to store a copy of the data or host it in a database, and provide some basic visualisation tools.

GenBank

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GenBank® is a comprehensive database that contains publicly available nucleotide sequences for almost 260 000 formally described species. These sequences are obtained primarily through submissions from individual laboratories and batch submissions from large-scale sequencing projects, including whole-genome shotgun (WGS) and environmental sampling projects. Most submissions are made using the web-based BankIt or standalone Sequin programs, and GenBank staff assigns accession numbers upon data receipt. Daily data exchange with the European Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage. GenBank is accessible through the NCBI Entrez retrieval system, which integrates data from the major DNA and protein sequence databases along with taxonomy, genome, mapping, protein structure and domain information, and the biomedical journal literature via PubMed. BLAST provides sequence similarity searches of GenBank and other sequence databases. Complete bimonthly releases and daily updates of the GenBank database are available by FTP.

Ensembl Fungi

e!EnsemblFungi

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EnsemblFungi is a genome-centric portal for fungal species. It is a project to maintain annotation on selected genomes.

Ensembl Genomes

e!EnsemblGenomes

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The Ensembl genome annotation system, developed jointly by the EBI and the Wellcome Trust Sanger Institute, has been used for the annotation, analysis and display of vertebrate genomes since 2000. Since 2009, the Ensembl site has been complemented by the creation of five new sites, for bacteria, protists, fungi, plants and invertebrate metazoa, enabling users to use a single collection of (interactive and programatic) interfaces for accessing and comparing genome-scale data from species of scientific interest from across the taxonomy. In each domain, we aim to bring the integrative power of Ensembl tools for comparative analysis, data mining and visualisation across genomes of scientific interest, working in collaboration with scientific communities to improve and deepen genome annotation and interpretation.

European Social Survey

ESS Data

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The European Social Survey (the ESS) is a biennial multi-country survey covering over 30 nations. The first round was fielded in 2002/2003, the fifth in 2010/2011. The questionnaire includes two main sections, each consisting of approximately 120 items; a 'core' module which remains relatively constant from round to round, plus two or more 'rotating' modules, repeated at intervals. The core module aims to monitor change and continuity in a wide range of social variables, including media use; social and public trust; political interest and participation; socio-political orientations; governance and efficacy; moral; political and social values; social exclusion, national, ethnic and religious allegiances; well-being; health and security; human values; demographics and socio-economics

The National Archives

The National Archives Discovery

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The National Archives is home to millions of historical documents, known as records, which were created and collected by UK central government departments and major courts of law. Data of the fomer National Digital Archive of Datasets (NDAD) collection, which was active from 1997 to 2010 and preserves and provides online access to archived digital datasets and documents from UK central government departments, is integrated. Access to records held by The National Archives and more than 2,500 other archives.

FAIRDOMHub

The SEEK datafiles

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The FAIRDOMHub is built upon the SEEK software suite, which is an open source web platform for sharing scientific research assets, processes and outcomes. FAIRDOM (Web Site) will establish a support and service network for European Systems Biology. It will serve projects in standardizing, managing and disseminating data and models in a FAIR manner: Findable, Accessible, Interoperable and Reusable. FAIRDOM is an initiative to develop a community, and establish an internationally sustained Data and Model Management service to the European Systems Biology community. FAIRDOM is a joint action of ERA-Net EraSysAPP and European Research Infrastructure ISBE.

The Chemical Probes Portal

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The Chemical Probes Portal is an online open access catalog of annotated small molecule inhibitors, agonists and other chemical tools for biological research and preclinical drug discovery. Annotations for are extensive and distinguish between activity in cells and model organisms.

OpenHeritage 3D

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As 3D and reality capture strategies for heritage documentation become more widespread and available, there has emerged a growing need to assist with guiding and facilitating accessibility to data, while maintaining scientific rigor, cultural and ethical sensitivity, discoverability, and archival standards. In response to these areas of need, The Open Heritage 3D Alliance (OHA) has developed as an advisory group governing the Open Heritage 3D initiative. This collaborative advisory group are among some of the earliest adopters of 3D heritage documentation technologies, and offer first-hand guidance for best practices in data management, sharing, and dissemination approaches for 3D cultural heritage projects. The founding members of the OHA, consist of experts and organizational leaders from CyArk, Historic Environment Scotland, and the University of South Florida Libraries, who together have significant repositories of legacy and on-going 3D research and documentation projects. These groups offer unique insight into not only the best practices for 3D data capture and sharing, but also have come together around concerns dealing with standards, formats, approach, ethics, and archive commitment. Together, the OHA has begun the journey to provide open access to cultural heritage 3D data, while maintaining integrity, security, and standards relating to discoverable dissemination. Together, the OHA will work to provide democratized access to primary heritage 3D data submitted from donors and organizations, and will help to facilitate an operation platform, archive, and organization of resources into the future.

ORDA - The University of Sheffield Research Data Catalogue and Repository

Discover research from The University of Sheffield

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The figshare service for the University of Sheffield allows researchers to store, share and publish research data. It helps the research data to be accessible by storing Metadata alongside datasets. Additionally, every uploaded item receives a Digital Object identifier (DOI), which allows the data to be citable and sustainable. If there are any ethical or copyright concerns about publishing a certain dataset, it is possible to publish the metadata associated with the dataset to help discoverability while sharing the data itself via a private channel through manual approval.

University of Hertfordshire Research Archive

UHRA

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University repository containing publication data and datasets.

Vega

Vertebrate Genome Annotation database

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A repository for high-quality gene models produced by the manual annotation of vertebrate genomes. The final update of Vega, version 68, was released in February 2017 and is now archived at vega.archive.ensembl.org. We plan to maintain this resource until Feb 2020.

Research Data at Essex

University of Essex Research Data Repository

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The Research Data Repository is the University of Essex's online data repository where research data resulting from research taking place within the university can be deposited, published and made accessible to the research community.

NCL Data

Newcastle University Data

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A digital repository for Newcastle University’s research data.

Wellcome Trust Sanger Institute, Scientific resources

Wellcome Trust Sanger Institute, Data directory

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The Wellcome Trust Sanger Institute is a charitably funded genomic research centre located in Hinxton, nine miles south of Cambridge in the UK. We study diseases that have an impact on health globally by investigating genomes. Building on our past achievements and based on priorities that exploit the unique expertise of our Faculty of researchers, we will lead global efforts to understand the biology of genomes. We are convinced of the importance of making this research available and accessible for all audiences. reduce global health burdens.

UK Government Web Archive

UKGWA

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The UK Government Web Archive captures, preserves, and makes accessible UK central government information published on the web. The web archive includes videos, tweets, images and websites dating from 1996 to present.