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Found 40 result(s)

ExPASy Bioinformatics Resource Portal

SIB Bioinformatics Resource Portal

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Swiss Institute of Bioinformatics (SIB) coordinates research and education in bioinformatics throughout Switzerland and provides bioinformatics services to the national and international research community. ExPASy gives access to numerous repositories and databases of SIB. For example: array map, MetaNetX, SWISS-MODEL and World-2DPAGE, and many others see a list here http://www.expasy.org/resources

ATNF Pulsar Catalogue

Psrcat

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All observations obtained with the Parkes radio telescope are made available to the general community after an embargo period. Usually this embargo period is set to 18 months after the observation. The catalogue includes all published rotation-powered pulsars, including those detected only at high energies. It also includes Anomalous X-ray Pulsars (AXPs) and Soft Gamma-ray Repeaters (SGRs) for which coherent pulsations have been detected. However, it excludes accretion-powered pulsars such as Her X-1 and the recently discovered X-ray millisecond pulsars. ATNF Pulsar catalogue contains information on all published pulsars, with complete bibliographic information. For professional astronomers, a more detailed "Expert" web interface is available allowing access to parameters of specialist interest. The catalogue can also be accessed using a command-line interface on unix or linux systems.

DEG

Database of Essential Genes

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DEG hosts records of currently available essential genomic elements, such as protein-coding genes and non-coding RNAs, among bacteria, archaea and eukaryotes. Essential genes in a bacterium constitute a minimal genome, forming a set of functional modules, which play key roles in the emerging field, synthetic biology.

Canadian Opinion Research Archive

CORA

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The Canadian Opinion Research Archive at Queen's University makes available commercial and independent surveys to the academic, research and journalistic communities. Founded in 1992, CORA contains hundreds of surveys including thousands of discrete items collected by major commercial Canadian firms dating back to the 1970s. CORA is continually adding new surveys and is always soliciting new data from commercial research firms, independent think tanks, research institutes, NGOs, and academic researchers. This website also includes readily accessible results from these surveys, tracking Canadian opinion over time on frequently asked survey questions, as well as tabular results from recent Canadian surveys, and more general information on polling. This material is made available as a public service by CORA and its partners.

FlyReactome

a curated knowledgebase of drosophila melanogaster pathways

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<<<!!!<<< This repository is no longer available. This record is out dated >>>!!!>>>- eir fields, maintained by the FlyReactome staff.

Metlin

The original and most comprehensive MS/MS metabolite database

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METLIN represents the largest MS/MS collection of data with the database generated at multiple collision energies and in positive and negative ionization modes. The data is generated on multiple instrument types including SCIEX, Agilent, Bruker and Waters QTOF mass spectrometers.

CLARIN-LT

CLARIN-LT Repository

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Lithuania became a full member of CLARIN ERIC in January of 2015 and soon CLARIN-LT consortium was founded by three partner universities: Vytautas Magnus University, Kaunas Technology University and Vilnius University. The main goal of the consortium is to become a CLARIN B centre, which will be able to serve language users in Lithuania and Europe for storing and accessing language resources.

Monash Bridges

monash.figshare (formerly)

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Bridges is Monash University's repository for research data, collections, and research activity outputs. It is also the home of the University's online archive of PhD and Masters by Research theses.

ZINC

CartBlanche

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The ZINC Database contains commercially available compounds for structure based virtual screening. It currently has compounds that can simply be purchased. It is provided in ready-to-dock, 3D formats with molecules represented in biologically relevant forms. It is available in subsets for general screening as well as target-, chemotype- and vendor-focused subsets. ZINC is free for everyone to use and download at the website zinc.docking.org.

GiardiaDB

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Giardia lamblia is a significant, environmentally transmitted, human pathogen and an amitochondriate protist. It is a major contributor to the enormous worldwide burden of human diarrheal diseases, yet the basic biology of this parasite is not well understood. No virulence factor has been identified. The Giardia lamblia genome contains only 12 million base pairs distributed onto five chromosomes. Its analysis promises to provide insights about the origins of nuclear genome organization, the metabolic pathways used by parasitic protists, and the cellular biology of host interaction and avoidance of host immune systems. Since the divergence of Giardia lamblia lies close to the transition between eukaryotes and prokaryotes in universal ribosomal RNA phylogenies, it is a valuable, if not unique, model for gaining basic insights into genetic innovations that led to formation of eukaryotic cells. In evolutionary terms, the divergence of this organism is at least twice as ancient as the common ancestor for yeast and man. A detailed study of its genome will provide insights into an early evolutionary stage of eukaryotic chromosome organization as well as other aspects of the prokaryotic / eukaryotic divergence.

International Earth Rotation and Reference Systems Service

IERS

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The IERS provides data on Earth orientation, on the International Celestial Reference System/Frame, on the International Terrestrial Reference System/Frame, and on geophysical fluids. It maintains also Conventions containing models, constants and standards.

LOAR

Library Open Access Repository

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Library Open Access Repository (LOAR) is an open data repository established in 2016 as a service for storing and providing access to Danish research data. The service has the following key goals: Make data accessible to review for publications. Enable researchers to meet requirements for Danish and European grants. Ensure data privacy and removal of data as appropriate. Enable reuse of data where appropriate Researchers who upload data are expected to share the data using Creative Commons licenses.

NCBI Genome

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<<<!!!<<< Effective May 2024, NCBI's Genome resource will no longer be available. NCBI Genome data can now be found on the NCBI Datasets taxonomy pages. https://www.re3data.org/repository/r3d100014298 >>>!!!>>> The Genome database contains annotations and analysis of eukaryotic and prokaryotic genomes, as well as tools that allow users to compare genomes and gene sequences from humans, microbes, plants, viruses and organelles. Users can browse by organism, and view genome maps and protein clusters.

IBICT Cariniana Dataverse Network

Instituto Brasileiro de Informação em Ciência e Tecnologia Cariniana Dataverse Network

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IBICT is providing a research data repository that takes care of long-term preservation and archiving of good practices, so that researchers can share, maintain control and get recognition for your data. The repository supports research data sharing with Quote persistent data, allowing them to be played. The Dataverse is a large open data repository of all disciplines, created by the Institute for Quantitative Social Science at Harvard University. IBICT the Dataverse repository provides a means available for free to deposit and find specific data sets stored by employees of the institutions participating in the Cariniana network.

Canadian Open Neuroscience Platform Portal

CONP

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The CONP portal is a web interface for the Canadian Open Neuroscience Platform (CONP) to facilitate open science in the neuroscience community. CONP simplifies global researcher access and sharing of datasets and tools. The portal internalizes the cycle of a typical research project: starting with data acquisition, followed by processing using already existing/published tools, and ultimately publication of the obtained results including a link to the original dataset. From more information on CONP, please visit https://conp.ca

European Union Open Data Portal

EU Open Data Portal

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The European Union Open Data Portal is the single point of access to a growing range of data from the institutions and other bodies of the European Union (EU). Data are free for you to use and reuse for commercial or non-commercial purposes. By providing easy and free access to data, the portal aims to promote their innovative use and unleash their economic potential. It also aims to help foster the transparency and the accountability of the institutions and other bodies of the EU. The EU Open Data Portal is managed by the Publications Office of the European Union. Implementation of the EU's open data policy is the responsibility of the Directorate-General for Communications Networks, Content and Technology of the European Commission.

HITRAN online

HIgh resolution TRANsmission molecular absorption database

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HITRAN is an acronym for high-resolution transmission molecular absorption database. The HITRAN compilation of the SAO (HIgh resolution TRANmission molecular absorption database) is used for predicting and simulating transmission and emission of light in atmospheres. It is the world-standard database in molecular spectroscopy. The journal article describing it is the most cited reference in the geosciences. There are presently about 5000 HITRAN users world-wide. Its associated database HITEMP (high-temperature spectroscopic absorption parameters) is accessible by the HITRAN website.

ECCAD - the GEIA database

Emissions of atmospheric Compounds & Compilation of Ancillary Data

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The main goal of the ECCAD project is to provide scientific and policy users with datasets of surface emissions of atmospheric compounds, and ancillary data, i.e. data required to estimate or quantify surface emissions. The supply of ancillary data - such as maps of population density, maps of fires spots, burnt areas, land cover - could help improve and encourage the development of new emissions datasets. ECCAD offers: Access to global and regional emission inventories and ancillary data, in a standardized format Quick visualization of emission and ancillary data Rationalization of the use of input data in algorithms or emission models Analysis and comparison of emissions datasets and ancillary data Tools for the evaluation of emissions and ancillary data ECCAD is a dynamical and interactive database, providing the most up to date datasets including data used within ongoing projects. Users are welcome to add their own datasets, or have their regional masks included in order to use ECCAD tools.

German Federation for Biological Data

GFBio

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The project brings together national key players providing environmentally related biological data and services to develop the ‘German Federation for Biological Data' (GFBio). The overall goal is to provide a sustainable, service oriented, national data infrastructure facilitating data sharing and stimulating data intensive science in the fields of biological and environmental research.

American National Election Studies

ANES

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The American National Election Studies (ANES) conducts national surveys and pilot studies and provides large, multifaceted datasets. Time Series Studies are conducted during years of national elections, with pre-election and post-election surveys conducted in presidential election years and post-election surveys conducted during congressional election years. Pilot Studies are normally conducted in years when there is no national election and are designed to test new, or to refine existing, instrumentation and study designs. Other Major Data Collections includes panel studies and other special studies.

SciLifeLab Data Repository

SciLifeLab figshare

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This repository accepts data from life science researchers and service units in Sweden. The repository is operated by SciLifeLab, which is the national infrastructure for life science and environmental research in Sweden. This repository replaces NBIS DOI repository: https://doi.org/10.17616/R3CW52

Canadian Poisonous Plants Information System

Système canadien d'information sur les plantes toxiques

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!!! <<< the repository is offline >>> !!! The Canadian Poisonous Plants Information System presents data on plants that cause poisoning in livestock, pets, and humans. The plants include native, introduced, and cultivated outdoor plants as well as indoor plants that are found in Canada. Some food and herbal plants that may cause potential poisoning problems are also included.

FAIRDOMHub

The SEEK datafiles

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The FAIRDOMHub is built upon the SEEK software suite, which is an open source web platform for sharing scientific research assets, processes and outcomes. FAIRDOM (Web Site) will establish a support and service network for European Systems Biology. It will serve projects in standardizing, managing and disseminating data and models in a FAIR manner: Findable, Accessible, Interoperable and Reusable. FAIRDOM is an initiative to develop a community, and establish an internationally sustained Data and Model Management service to the European Systems Biology community. FAIRDOM is a joint action of ERA-Net EraSysAPP and European Research Infrastructure ISBE.

VEuPathDB

formerly: Eukaryotic Pathogen Database Resources

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EuPathDB (formerly ApiDB) is an integrated database covering the eukaryotic pathogens in the genera Acanthamoeba, Annacaliia, Babesia, Crithidia, Cryptosporidium, Edhazardia, Eimeria, Encephalitozoon, Endotrypanum, Entamoeba, Enterocytozoon, Giardia, Gregarina, Hamiltosporidium, Leishmania, Nematocida, Neospora, Nosema, Plasmodium, Theileria, Toxoplasma, Trichomonas, Trypanosoma and Vavraia, Vittaforma). While each of these groups is supported by a taxon-specific database built upon the same infrastructure, the EuPathDB portal offers an entry point to all of these resources, and the opportunity to leverage orthology for searches across genera.

PlasmoDB

Plasmodium Genomics Resource

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PlasmoDB is a genome database for the genus Plasmodium, a set of single-celled eukaryotic pathogens that cause human and animal diseases, including malaria.