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Found 30 result(s)

Collaborative Climate Community Data and Processing Grid

C3Grid

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>>>!!!<<< The repository is no longer available. >>>!!!<<< C3-Grid is an ALREADY FINISHED project within D-Grid, the initiative to promote a grid-based e-Science framework in Germany. The goal of C3-Grid is to support the workflow of Earth system researchers. A grid infrastructure will be implemented that allows efficient distributed data processing and inter-institutional data exchange. Aim of the effort was to develop an infrastructure for uniform access to heterogeneous data and distributed data processing. The work was structured in two projects funded by the Federal Ministry of Education and Research. The first project was part of the D-Grid initiative and explored the potential of grid technology for climate research and developed a prototype infrastructure. Details about the C3Grid architecture are described in “Earth System Modelling – Volume 6”. In the second phase "C3Grid - INAD: Towards an Infrastructure for General Access to Climate Data" this infrastructure was improved especially with respect to interoperability to Earth System Grid Federation (ESGF). Further the portfolio of available diagnostic workflows was expanded. These workflows can be re-used now in adjacent infrastructures MiKlip Evaluation Tool (http://www.fona-miklip.de/en/index.php) and as Web Processes within the Birdhouse Framework (http://bird-house.github.io/). The Birdhouse Framework is now funded as part of the European Copernicus Climate Change Service (https://climate.copernicus.eu/) managed by ECMWF and will be extended to provide scalable processing services for ESGF hosted data at DKRZ as well as IPSL and BADC.

LEPR - Library of Experimental Phase Relations

Library of Experimental Phase Relations and Trace element Distribution experimental database

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LEPR is a database of results of published experimental studies involving liquid-solid phase equilibria relevant to natural magmatic systems. TraceDs is a database of experimental studies involving trace element distribution between liquid, solid and fluid phases.

NanoCommons Knowledge Base

NanoSolveIT Knowledge Base

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The NanoTox Knowlege Base provides access to Nanomaterials, their physico-chemical characterisations, toxicological assays and environmental data as well as computational model based descriptors.

Metlin

The original and most comprehensive MS/MS metabolite database

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METLIN represents the largest MS/MS collection of data with the database generated at multiple collision energies and in positive and negative ionization modes. The data is generated on multiple instrument types including SCIEX, Agilent, Bruker and Waters QTOF mass spectrometers.

CARMEN

Code analysis, repository & modelling for e-neuroscience

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

Fox Insight Date Exploration Network

Fox DEN

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Fox DEN provides investigators with a tool to explore, download and apply statistical models on aggregated data collected for the Fox Insight online clinical study. The Fox Insight study collects patient-reported outcomes and genetic data from people with Parkinson's disease and their loved ones.

Halocarbons in the Ocean and Atmosphere database project

HalOcAt

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<<<!!!<<< There are no more data available. >>>!!!>>> HalOcAt brings together global oceanic and atmospheric data of mainly short-lived brominated and iodinated trace gases.

Project Achilles

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Project Achilles is a systematic effort aimed at identifying and cataloging genetic vulnerabilities across hundreds of genomically characterized cancer cell lines. The project uses genome-wide genetic perturbation reagents (shRNAs or Cas9/sgRNAs) to silence or knock-out individual genes and identify those genes that affect cell survival. Large-scale functional screening of cancer cell lines provides a complementary approach to those studies that aim to characterize the molecular alterations (e.g. mutations, copy number alterations) of primary tumors, such as The Cancer Genome Atlas (TCGA). The overall goal of the project is to identify cancer genetic dependencies and link them to molecular characteristics in order to prioritize targets for therapeutic development and identify the patient population that might benefit from such targets. Project Achilles data is hosted on the Cancer Dependency Map Portal (DepMap) where it has been harmonized with our genomics and cellular models data. You can access the latest and all past datasets here: https://depmap.org/portal/download/all/

Brain-CODE

Brain-Centre for Ontario Data Exploration

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Brain-CODE is a large-scale informatics platform that manages the acquisition and storage of multidimensional data collected from participants with a variety of brain disorders.

Comparative Welfare Entitlements Dataset

CWED

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The Comparative Welfare Entitlements Dataset (CWED) contains information about the structure and generosity of social insurance benefits in 33 countries around the world. The data contained here are an updated and extended version of CWED 1, which has been available since 2004. This web site allows you to download customized portions of the CWED 2 data, browse the Working Paper Series or access documentary material. For recent updates to this dataset, please see https://www.cwep.us/

MatDat.com

Material Properties Database and Estimation Tools

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Over 1000 detailed, fully referenced and verified datasets for steels, aluminium and titanium alloys, cast irons/steels, weld metals. Materials can be searched according to a number of different criteria. Initial search results are presented in the form of a table from which they can be selected for presentation in form of detailed report or for comparison overview (up to 5 materials). In addition to material information and values of properties/parameters, images of microstructure, specimens and those of stress-strain, stress- and strain-life curves (if available) can be reviewed as well.

MEMENTO

MarinE MethanE and NiTrous Oxide

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MEMENTO aims to become a valuable tool for identifying regions of the world ocean that should be targeted in future work to improve the quality of air-sea flux estimates.

Fachinformationssystem Geophysik

FIS GP

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LIAG's Geophysics Information System (FIS GP) serves for the storage and supply of geophysical measurements and evaluations of LIAG and its partners. The architecture of the overall system intends a subdivision into an universal part (superstructure) and into several subsystems dedicated to geophysical methods (borehole geophysics, gravimetry, magnetics, 1D/2D geoelectrics, underground temperatures, seismics, VSP, helicopter geophysics and rock physics. The building of more subsystems is planned.

National Genomic Resources Repository

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National Genomic Resources Repository is established as an institutional framework for methodical and centralized efforts to collect, generate, conserve and distribute genomic resources for agricultural research.

NIDDK Central Repository

The National Institute of Diabetes and Digestive and Kidney Diseases

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In 2003, the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) at NIH established Data, Biosample, and Genetic Repositories to increase the impact of current and previously funded NIDDK studies by making their data and biospecimens available to the broader scientific community. These Repositories enable scientists not involved in the original study to test new hypotheses without any new data or biospecimen collection, and they provide the opportunity to pool data across several studies to increase the power of statistical analyses. In addition, most NIDDK-funded studies are collecting genetic biospecimens and carrying out high-throughput genotyping making it possible for other scientists to use Repository resources to match genotypes to phenotypes and to perform informative genetic analyses.

NIST FLYCHK

Collisional-Radiative Code

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FLYCHK provides a capability to generate atomic level populations and charge state distributions for low-Z to mid-Z elements under NLTE conditions.

ECCAD - the GEIA database

Emissions of atmospheric Compounds & Compilation of Ancillary Data

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The main goal of the ECCAD project is to provide scientific and policy users with datasets of surface emissions of atmospheric compounds, and ancillary data, i.e. data required to estimate or quantify surface emissions. The supply of ancillary data - such as maps of population density, maps of fires spots, burnt areas, land cover - could help improve and encourage the development of new emissions datasets. ECCAD offers: Access to global and regional emission inventories and ancillary data, in a standardized format Quick visualization of emission and ancillary data Rationalization of the use of input data in algorithms or emission models Analysis and comparison of emissions datasets and ancillary data Tools for the evaluation of emissions and ancillary data ECCAD is a dynamical and interactive database, providing the most up to date datasets including data used within ongoing projects. Users are welcome to add their own datasets, or have their regional masks included in order to use ECCAD tools.

Social Data Network

The Greek research infrastructure for social sciences

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So.Da.Net network, following the Social Data Bank (SDB) of the National Centre for Social Research (EKKE) that pre-existed, in a time frame of five years has been linked and closely collaborated with the european data archives. EKKE through SDB has participated to the European Consortium of Social Science Data Archives (CESSDA ERIC) since 2000. The national research network Sodanet_GR has been formed in 2012 and is consisted of the following 7 organisations: 1) National Centre for Social Research (EKKE) – Social Data Bank 2) University of the Aegean – Department of Sociology 3) National & Kapodistrian University of Athens – Department of Political Science & Public Administration 4) Panteion University – Department of Political Science & History 5) University of Peloponnese – Department of Social & Educational Policy 6) Democritus University of Trace – Department of Social Administration & Political Science 7) University of Crete – Department of Sociology . The So.Da.Net network is the Greek research infrastructure for the social sciences. So.Da.Net supports multidisciplinary research and promotes the acquisition, exchange, processing as well as dissemination of data deriving from and related to social science research.

ROAR Isolate Database

Reservoirs of Antibiotic Resistance Network

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<<<!!!<<< The repository is no longer available. >>>!!!<<< 2019-03-29: no more access to ROAR Isolate Database

MicroScope

Microbial Genome Annotation & Analysis Platform

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The MicroScope platform is an informatics infrastructure dedicated to the annotation and comparative analysis of microbial genomes and metagenomes.

Datenbank Gesprochenes Deutsch

Database for Spoken German

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The "Database for Spoken German (DGD)" is a corpus management system in the program area Oral Corpora of the Institute for German Language (IDS). It has been online since the beginning of 2012 and since mid-2014 replaces the spoken German database, which was developed in the "Deutsches Spracharchiv (DSAv)" of the IDS. After single registration, the DGD offers external users a web-based access to selected parts of the collection of the "Archive Spoken German (AGD)" for use in research and teaching. The selection of the data for external use depends on the consent of the respective data provider, who in turn must have the appropriate usage and exploitation rights. Also relevant to the selection are certain protection needs of the archive. The Archive for Spoken German (AGD) collects and archives data of spoken German in interactions (conversation corpora) and data of domestic and non-domestic varieties of German (variation corpora). Currently, the AGD hosts around 50 corpora comprising more than 15000 audio and 500 video recordings amounting to around 5000 hours of recorded material with more than 7000 transcripts. With the Research and Teaching Corpus of Spoken German (FOLK) the AGD is also compiling an extensive German conversation corpus of its own. !!! Access to data of Datenbank Gesprochenes Deutsch (DGD) is also provided by: IDS Repository https://www.re3data.org/repository/r3d100010382 !!!

Environmental Monitoring System

EMS

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EMS is the BC Ministry of Environment's primary monitoring data repository. The system was designed to capture data covering physical/chemical and biological analyses performed on water, air, solid waste discharges and ambient monitoring sites throughout the province. It also contains related quality assurance data. Samples are collected by either ministry staff or permittees under the Environmental Management Act and then analyzed in public or private sector laboratories. The majority of such monitoring data is entered into EMS electronically via Electronic Data Transfer (EDT). EMS data is typically available in formatted hard copy reports or electronically in comma delimited (e.g., .csv) files as: Monitoring location-related data, Sample and results-related data. Direct access to EMS is restricted to ministry staff, however public access is available upon request through EMS Web Reporting.

International Neuroimaging Data-sharing Initiative

INDI

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INDI was formed as a next generation FCP effort. INDI aims to provide a model for the broader imaging community while simultaneously creating a public dataset capable of dwarfing those that most groups could obtain individually.

Cancer Cell Line Encyclopedia

CCLE

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The Cancer Cell Line Encyclopedia project is a collaboration between the Broad Institute, and the Novartis Institutes for Biomedical Research and its Genomics Institute of the Novartis Research Foundation to conduct a detailed genetic and pharmacologic characterization of a large panel of human cancer models, to develop integrated computational analyses that link distinct pharmacologic vulnerabilities to genomic patterns and to translate cell line integrative genomics into cancer patient stratification. The CCLE provides public access to genomic data, analysis and visualization for about 1000 cell lines.

ComBase

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ComBase is a resource for quantitative and predictive food microbiology. ComBase includes a database of observed microbial responses to a variety of food-related environments and a collection of predictive models.