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Found 308 result(s)

International HapMap Project

国际人类基因组单体型图计划

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<<<!!!<<< OFFLINE >>>!!!>>> A recent computer security audit has revealed security flaws in the legacy HapMap site that require NCBI to take it down immediately. We regret the inconvenience, but we are required to do this. That said, NCBI was planning to decommission this site in the near future anyway (although not quite so suddenly), as the 1,000 genomes (1KG) project has established itself as a research standard for population genetics and genomics. NCBI has observed a decline in usage of the HapMap dataset and website with its available resources over the past five years and it has come to the end of its useful life. The International HapMap Project is a multi-country effort to identify and catalog genetic similarities and differences in human beings. Using the information in the HapMap, researchers will be able to find genes that affect health, disease, and individual responses to medications and environmental factors. The Project is a collaboration among scientists and funding agencies from Japan, the United Kingdom, Canada, China, Nigeria, and the United States. All of the information generated by the Project will be released into the public domain. The goal of the International HapMap Project is to compare the genetic sequences of different individuals to identify chromosomal regions where genetic variants are shared. By making this information freely available, the Project will help biomedical researchers find genes involved in disease and responses to therapeutic drugs. In the initial phase of the Project, genetic data are being gathered from four populations with African, Asian, and European ancestry. Ongoing interactions with members of these populations are addressing potential ethical issues and providing valuable experience in conducting research with identified populations. Public and private organizations in six countries are participating in the International HapMap Project. Data generated by the Project can be downloaded with minimal constraints. The Project officially started with a meeting in October 2002 (https://www.genome.gov/10005336/) and is expected to take about three years.

BioVel

Biodiversity Virtual e-Laboratory

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<<<!!!<<< This repository is no longer available. >>>!!!>>> BioVeL is a virtual e-laboratory that supports research on biodiversity issues using large amounts of data from cross-disciplinary sources. BioVeL supports the development and use of workflows to process data. It offers the possibility to either use already made workflows or create own. BioVeL workflows are stored in MyExperiment - Biovel Group http://www.myexperiment.org/groups/643/content. They are underpinned by a range of analytical and data processing functions (generally provided as Web Services or R scripts) to support common biodiversity analysis tasks. You can find the Web Services catalogued in the BiodiversityCatalogue.

RADARSAT-1

Canada's Earth Observation Satellite

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Launched in November 1995, RADARSAT-1 provided Canada and the world with an operational radar satellite system capable of timely delivery of large amounts of data. Equipped with a powerful synthetic aperture radar (SAR) instrument, it acquired images of the Earth day or night, in all weather and through cloud cover, smoke and haze. RADARSAT-1 was a Canadian-led project involving the Canadian federal government, the Canadian provinces, the United States, and the private sector. It provided useful information to both commercial and scientific users in such fields as disaster management, interferometry, agriculture, cartography, hydrology, forestry, oceanography, ice studies and coastal monitoring. In 2007, RADARSAT-2 was launched, producing over 75,000 images per year since. In 2019, the RADARSAT Constellation Mission was deployed, using its three-satellite configuration for all-condition coverage. More information about RADARSAT-2 see https://mda.space/en/geo-intelligence/ RADARSAT-2 PORTAL see https://gsiportal.mda.space/gc_cp/#/map

Canadian Centre for Climate Modelling and Analysis

Centre canadien de la modélisation et de l'analyse climatique

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CCCma has developed a number of climate models. These are used to study climate change and variability, and to understand the various processes which govern the climate system. They are also used to make quantitative projections of future long-term climate change (given various greenhouse gas and aerosol forcing scenarios), and increasingly to make initialized climate predictions on time scales ranging from seasons to decades. A brief description of these models and their corresponding references can be found: https://www.canada.ca/en/environment-climate-change/services/climate-change/science-research-data/modeling-projections-analysis/centre-modelling-analysis/models.html

Ontario Reptile and Amphibian Atlas

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Reptiles and amphibians are collectively known as herpetofauna and are a unique part of Ontario’s biodiversity. An earlier atlas, called the Ontario Herpetofaunal Summary Atlas, provided extensive information about where many of the province’s reptiles and amphibians occurred. The Atlas is transitioning into a new era, with Ontario Nature wrapping-up the data collection phase of this project as of December 1, 2019. Now that we have discontinued our app and online form, we encourage you to continue submitting any future observations through the ‘Herps of Ontario’ project (https://www.inaturalist.org/projects/herps-of-ontario) on iNaturalist or directly to the Natural Heritage Information Centre (nhicrequests@ontario.ca) for species at risk. To learn more about the transition, read our blog (https://ontarionature.org/ontario-reptile-and-amphibian-atlas-changes/)

Canadian Climate Data and Scenarios

DSCC

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The CCDS is an interface for distributing climate change information. The goals of CCDS are to: Support climate change impact and adaptation research in Canada and other countries; Support stakeholders requiring scenario information for decision making and policy development. Provide access to Canadian research on the development of scenarios and adaptation research.

NIST XCOM

XCOM

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A web database is provided which can be used to calculate photon cross sections for scattering, photoelectric absorption and pair production, as well as total attenuation coefficients, for any element, compound or mixture (Z ≤ 100), at energies from 1 keV to 100 GeV.

Historical Climate Data Canada

Données climatiques historiques

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Historical Climate Data (formerly: The National Climate Data and Information Archive - NCDC) is a web-based resource maintained by Environment and Climate Change Canada and the Meteorological Service of Canada. The site houses a number of statistical and data compilation and viewing tools. From the website, users can access historical climate data for Canadian locations and dates, view climate normals and averages, and climate summaries. A list of Canadian air stations and their meteorological reports and activities is also available, along with rainfall statistics for more than 500 locations across Canada. Users can also download the Canadian daily climate data for 2006/07. In addition, technical documentation is offered for data users to interpret the available data. Other documentation includes a catalogue of Canadian weather reporting stations, a glossary, and a calculation of the 1971 to 2000 climate normals for Canada. This resource carries authority and accuracy because it is maintained by a national government department and service. While the majority of the statistics are historical, the data is up-to-date and contains current and fairly recent climate data. This government resource is intended for an audience that has the ability and knowledge to interpret climatological data

CR-EST

The IPK Crop EST Database

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The Crop EST Database (CR-EST) is a public available online resource providing access to sequence, classification, clustering, and annotation data of crop EST projects at the IPK. A view of these information give the summarized numbers about genomic data of species listed in the adjacent table.

The Global Agricultural Trial Repository and Database

AgTrials

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<<<!!!<<< This repository is no longer available. http://agtrials.org/ >>>!!!>>>

NIDDK Central Repository

The National Institute of Diabetes and Digestive and Kidney Diseases

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In 2003, the National Institute of Diabetes and Digestive and Kidney Diseases (NIDDK) at NIH established Data, Biosample, and Genetic Repositories to increase the impact of current and previously funded NIDDK studies by making their data and biospecimens available to the broader scientific community. These Repositories enable scientists not involved in the original study to test new hypotheses without any new data or biospecimen collection, and they provide the opportunity to pool data across several studies to increase the power of statistical analyses. In addition, most NIDDK-funded studies are collecting genetic biospecimens and carrying out high-throughput genotyping making it possible for other scientists to use Repository resources to match genotypes to phenotypes and to perform informative genetic analyses.

Addgene

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Addgene archives and distributes plasmids for researchers around the globe. They are working with thousands of laboratories to assemble a high-quality library of published plasmids for use in research and discovery. By linking plasmids with articles, scientists can always find data related to the materials they request.

Berman Jewish Data Bank

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The Berman Jewish Databank @ The Jewish Federations of North America is the central online address for quantitative studies of North American Jews and Jewish communities. Archives and makes available electronically questionnaires, reports and data files from the National Jewish Population Surveys (NJPS) of 1971, 1990 and 2000-01. It provides access to other national Jewish population reports, Jewish population statistics and approximately 200 local Jewish community studies from the major Jewish communities in North America.

modENCODE

Model Organism ENCyclopedia of DNA Elements

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<<<!!!<<< As of 2023, support to maintain the www.modencode.org and intermine.modencode.org sites have been retired following the end of funding. To access data from the modENCODE project, or for questions regarding the data they make available, please visit these databases: Fly data: FlyBase: ModENCODE data at FlyBase: https://wiki.flybase.org/wiki/FlyBase:ModENCODE_data_at_FlyBase FlyBase: https://www.re3data.org/repository/r3d100010591 Worm data: WormBase https://www.re3data.org/repository/r3d100010424 Data, including modENCODE and modERN project data, is also available at the ENCODE Portal: https://www.re3data.org/repository/r3d100013051 (search metadata and view datasets for Drosophila and Caenorhabditis https://www.encodeproject.org/matrix/?type=Experiment&control_type!=*&status=released&replicates.library.biosample.donor.organism.scientific_name=Drosophila+melanogaster&replicates.library.biosample.donor.organism.scientific_name=Caenorhabditis+elegans&replicates.library.biosample.donor.organism.scientific_name=Drosophila+pseudoobscura&replicates.library.biosample.donor.organism.scientific_name=Drosophila+mojavensis). >>>!!!>>>

NIST FLYCHK

Collisional-Radiative Code

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FLYCHK provides a capability to generate atomic level populations and charge state distributions for low-Z to mid-Z elements under NLTE conditions.

Alaska Satellite Facility SAR Data Center

ASF SDC

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The SAR Data Center has a large data archive of Synthetic Aperture Radar (SAR) from a variety of sensors available at no cost. Much of the SAR data in the ASF SDC archive is limited in distribution to the scientific research community and U.S. Government Agencies. In accordance with the Memoranda of Understanding (MOU) between the relevant flight agencies (CSA, ESA, JAXA) and the U.S. State Department, the ASF SDC does not distribute SAR data for commercial use. The research community can access the data (ERS-1, ERS-2, JERS-1, RADARSAT-1, and ALOS PALSAR) via a brief proposal process.

GeoPRISMS Data Portal

Geodyanmic Processes at Rifting and Subducting Margins

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The GeoPRISMS Data Portal was established in early 2011 to serve the NSF-funded GeoPRISMS program as a dedicated data system to facilitate open and timely exchange of data in support of the interdisciplinary science goals of the program. GeoPrisms Data Portal focuses upon the coordinated, interdisciplinary investigation of the continental margins through two initiatives: the Subduction Cycles and Deformation (SCD) and Rift Initiation and Evolution (RIE). In order to address the fundamental scientific questions, each initiative is associated with Primary Sites to address a wide range of field, experimental and theoretical studies spanning broad spatial and temporal scales.

Atomic and Molecular Data Information System

AMDIS

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The Atomic and Molecular Data Unit operates within the Nuclear Data Section of the International Atomic Energy Agency, Vienna, Austria.The primary objective of the Atomic and Molecular Data Unit is to establish and maintain internationally recommended numerical databases on atomic and molecular collision and radiative processes, atomic and molecular structure characteristics, particle-solid surface interaction processes and physico-chemical and thermo-mechanical material properties for use in fusion energy research and other plasma science and technology applications.

Academic Seismic Portal at LDEO

ASP at LDEO

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The MGDS Academic Seismic Portal at Lamont-Doherty Earth Observatory (ASP-LDEO), now part of the IEDA Data Facility, was initiated in 2003 to preserve and provide open access to multi-channel seismic (MCS) and single channel seismic (SCS) field data collected for academic research supported by the US National Science Foundation. Multi-channel data are primarily from the marine seismic vessels operated by Lamont-Doherty Earth Observatory of Columbia University. Modern single channel seismic data from other vessels including the R/V Palmer and USCG Healy, as well as data from portable seismic systems, are also served. The development of the Academic Seismic Portal has focused on the need to recover high value MCS data from older surveys as well as to establish sustainable procedures for preservation of data from modern programs. During the final two years of R/V Ewing operations, procedures were established for routine transfer of MCS data along with navigation and acquisition parameters, and other needed documentation to the ASP. Transfer of seismic data and acquisition information is now routine for the National Marine Seismic Facility, the R/V Marcus G. Langseth, which began science operations in February 2008. Data are documented and incorporated into the data system with full access restrictions protecting the scientists' rights to exclusive access during the proprietary hold period. Submission of data to the ASP helps ensure that NSF requirements for data sharing as outlined in the NSF OCE Data Policy are satisfied. Data from the Academic Seismic Portal at UTIG has been migrated to LDEO. As we continue to verify the accuracy and completeness of this data, there may be temporary issues with some seismic metadata and web services.

SoyBase

SoyBase and the Soybean Breeder's Toolbox

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SoyBase is a professionally curated repository for genetics, genomics and related data resources for soybean. It contains current genetic, physical and genomic sequence maps integrated with qualitative and quantitative traits. SoyBase includes annotated "Williams 82" genomic sequence and associated data mining tools. The repository maintains controlled vocabularies for soybean growth, development, and traits that are linked to more general plant ontologies.

National River Flow Archive

NRFA

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The National River Flow Archive is the primary archive of daily and peak river flows for the United Kingdom. The archive incorporates daily, monthly and flood peak data from over 1500 gauging stations. The NRFA holds a wide range of hydrological information to assist in the understanding and interpretation of measured river flows. In addition to time series of gauged river flow, the data centre maintains hydrometric information relating to the gauging stations and the catchments they command and data quantifying other parts of the hydrological cycle.

Born in Bradford

BiB

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Born in Bradford is one of the biggest and most important medical research studies undertaken in the UK. The project started in 2007 and is looking to answer questions about our health by tracking the lives of 13,500 babies and their families and will provide information for studies across the UK and around the world. The aim of Born in Bradford is to find out more about the causes of childhood illness by studying children from all cultures and backgrounds as their lives unfold.

Worldpop

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High spatial resolution, contemporary data on human population distributions are a prerequisite for the accurate measurement of the impacts of population growth, for monitoring changes and for planning interventions. The WorldPop project aims to meet these needs through the provision of detailed and open access population distribution datasets built using transparent approaches. The WorldPop project was initiated in October 2013 to combine the AfriPop, AsiaPop and AmeriPop population mapping projects. It aims to provide an open access archive of spatial demographic datasets for Central and South America, Africa and Asia to support development, disaster response and health applications. The methods used are designed with full open access and operational application in mind, using transparent, fully documented and peer-reviewed methods to produce easily updatable maps with accompanying metadata and measures of uncertainty.

Scientific Registry of Transplant Recipients

SRTR

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The Scientific Registry of Transplant Recipients (SRTR) is an ever-expanding national database of transplantation statistics. Founded in 1987, the registry exists to support the ongoing evaluation of the scientific and clinical status of solid organ transplantation, including kidney, heart, liver, lung, intestine, and pancreas. Data in the registry are collected by the Organ Procurement and Transplantation Network (OPTN) from hospitals and organ procurement organizations (OPOs) across the country. The SRTR contains current and past information about the full continuum of transplant activity, from organ donation and waiting list candidates to transplant recipients and survival statistics. This information is used to help develop evidence-based policy, to support analysis of transplant programs and OPOs, and to encourage research on issues of importance to the transplant community.

World Data Center for Cosmic Rays

WDCCR

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The database includes world-wide cosmic-ray neutron observations (pressure-corrected 1 hour counts) since 1953. The date are opened in two formats; one is 4096-byte "longformat" data and the other one is 80-byte "cardformat" data. Since the "cardformat" data are prepared only for quick check of data, the "longformat" data, which include information for data usage (constant, factors, etc), should be used for research works. PS files (compressed) of yearly plots are also available.