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Found 523 result(s)

Earth-prints Repository

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Earth-Prints is an open archive created and maintained by Istituto Nazionale di Geofisica e Vulcanologia. This digital collection allows users to browse, search and access manuscripts, journal articles, theses, conference materials, books, book-chapters, web products. The goal of our repository is to collect, capture, disseminate and preserve the results of research in the fields of Atmosphere, Cryosphere, Hydrosphere and Solid Earth. Earth-prints is young and growing rapidly.

IMAS Data Portal

Institute for Marine and Antarctic Studies Data Portal

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The Institute for Marine and Antarctic Studies (IMAS) pursues multidisciplinary and interdisciplinary work to advance understanding of temperate marine, Southern Ocean, and Antarctic environments. IMAS research is characterised as innovative, relevant, and globally distinctive. Education at IMAS delivers world class programs, resulting in highly trained graduates who serve the needs of academic institutions, industry, government, and the community. IMAS is naturally advantaged by its Southern Ocean location proximal to Antarctica, and hosts one of the world's largest critical masses of marine and Antarctic researchers. IMAS also operate facilities and host data sets of national and global interest and to the benefit of the community. The guiding framework of IMAS is that all data that are not commercial-in-confidence or restricted by legislation or agreement are owned by the University on behalf of the community or Commonwealth, are hosted by an organisation, and are shared with researchers for analysis and interpretation. IMAS is committed to the concept of Open Data. The IMAS Data Portal is an online interface showcasing the IMAS metadata catalogue and all available IMAS data. The portal aims to make IMAS data freely and openly available for the benefit of Australian marine and environmental science as a whole.

MetaboLights

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MetaboLights is a database for Metabolomics experiments and derived information. The database is cross-species, cross-technique and covers metabolite structures and their reference spectra as well as their biological roles, locations and concentrations, and experimental data from metabolic experiments.

Ensembl Genomes

e!EnsemblGenomes

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The Ensembl genome annotation system, developed jointly by the EBI and the Wellcome Trust Sanger Institute, has been used for the annotation, analysis and display of vertebrate genomes since 2000. Since 2009, the Ensembl site has been complemented by the creation of five new sites, for bacteria, protists, fungi, plants and invertebrate metazoa, enabling users to use a single collection of (interactive and programatic) interfaces for accessing and comparing genome-scale data from species of scientific interest from across the taxonomy. In each domain, we aim to bring the integrative power of Ensembl tools for comparative analysis, data mining and visualisation across genomes of scientific interest, working in collaboration with scientific communities to improve and deepen genome annotation and interpretation.

KONECT

Koblenz Network Collection

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This is the KONECT project, a project in the area of network science with the goal to collect network datasets, analyse them, and make available all analyses online. KONECT stands for Koblenz Network Collection, as the project has roots at the University of Koblenz–Landau in Germany. All source code is made available as Free Software, and includes a network analysis toolbox for GNU Octave, a network extraction library, as well as code to generate these web pages, including all statistics and plots. KONECT contains over a hundred network datasets of various types, including directed, undirected, bipartite, weighted, unweighted, signed and rating networks. The networks of KONECT are collected from many diverse areas such as social networks, hyperlink networks, authorship networks, physical networks, interaction networks and communication networks. The KONECT project has developed network analysis tools which are used to compute network statistics, to draw plots and to implement various link prediction algorithms. The result of these analyses are presented on these pages. Whenever we are allowed to do so, we provide a download of the networks.

UCSC Genome Browser

University of California Santa Cruz Genome Bioinformatics

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It is an interactive website offering access to genome sequence data from a variety of vertebrate and invertebrate species and major model organisms, integrated with a large collection of aligned annotations. The Browser is a graphical viewer optimized to support fast interactive performance and is an open-source, web-based tool suite built on top of a MySQL database for rapid visualization, examination, and querying of the data at many levels.

The SuiteSparse Matrix Collection

UFL, Sparse Matrix Collection

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The SuiteSparse Matrix Collection is a large and actively growing set of sparse matrices that arise in real applications. The Collection is widely used by the numerical linear algebra community for the development and performance evaluation of sparse matrix algorithms. It allows for robust and repeatable experiments. Its matrices cover a wide spectrum of domains, include those arising from problems with underlying 2D or 3D geometry (as structural engineering, computational fluid dynamics, model reduction, electromagnetics, semiconductor devices, thermodynamics, materials, acoustics, computer graphics/vision, robotics/kinematics, and other discretizations) and those that typically do not have such geometry (optimization, circuit simulation, economic and financial modeling, theoretical and quantum chemistry, chemical process simulation, mathematics and statistics, power networks, and other networks and graphs.

GERDA

GEophysical Relational DAtabase

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The geophysical database, GERDA, is a strong tool for data storage, handling and QC. Data are uploaded to and downloaded from the GERDA database through this website. GERDA is the Danish national database on shallow geophysical data. Since its establishment in 1998-2000, the database has been continuously developed. The database is hosted by the Geological Survey of Denmark and Greenland (GEUS).

European Vitis Database

Genetic resources of grapes

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The European Vitis Database is being meintained since 2007 by the Julius-Kühn-Institut to ensure the long-term and efficient use of grape genetic resources.

UK Data Service

UKDS

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The UK Data Service is a national data service funded by the ESRC to provide research access to the UK’s largest collection of social, economic and population data including UK government-sponsored surveys, cross-national surveys, longitudinal studies, UK census data, international aggregate, business data, and qualitative data. Designed to meet the data needs of researchers, students and teachers from all sectors, including academia, central and local government, charities and foundations, independent research centres, think tanks, business consultants and analysts, communities and the commercial sector, the UK Data Service provides access to high-quality social and economic data; support for policy-relevant research; guidance and training for the development of skills in data use, and the development of best practice in digital preservation and sharing. Data users can browse collections online and register to analyse and download them. Open Data collections are available for anyone to use. Key partners include JISC, the University of Manchester, University of Southampton, University of Leeds, University of Edinburgh and University College London (UCL). The lead partner is the UK Data Archive (https://service.re3data.org/repository/r3d100010215) based at the University of Essex, a Trusted Digital Repository (TDR) certified against the CoreTrustSeal (https://www.coretrustseal.org/) and certified against ISO27001 for Information Security (https://www.iso.org/standard/27001). The UK Data Service replaces the earlier ESRC investments of the Economic and Social Data Service (ESDS), the Secure Data Service (SDS), the Survey Question Bank and elements of the ESRC Census Programme.

Australian Waterbird Surveys

AWS

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Australian Waterbird Surveys (AWS) is an information source of waterbird communities around Australia, based on surveys of their diversity and numbers. It relies on rigorous data collection protocols and includes more than 50 waterbird species and up to 30 years of survey data. This open source also includes the extent of flooding of thousands of wetlands observed during our surveys. As a group, waterbirds can be sentinels of the ecological health of our wetlands and rivers. We hope this free information system will help track long-term changes in the environment, provide an assessment tool for individual species, report on our national and international responsibilities and help improve the way we manage our rivers and wetlands. It has been developed with the support of research and government partners.

Shared Platform for Antibiotic Research and Knowledge

SPARK

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An interactive database hosted by Collaborative Drug Discovery for antibiotic susceptibility data (MIC and IC50). Data is extracted from journal articles and/or contributed by different organizations and individuals. In some cases, the data has not previously been published. Access to the database is open to everyone and can be requested at pewtrusts.org/spark-antibiotic-discovery. Effective November 18, 2021, Pew transferred all SPARK data to The University of Queensland’s Community for Open Antimicrobial Drug Discovery (CO-ADD). Please visit spark.co-add.org https://co-add.org/.

Deakin Research Online

DRO

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DRO is Deakin University's research repository, providing digital curation by describing and preserving the University's research output and enabling worldwide discovery.

BBMRI-ERIC Directory

Directory of Biobanks

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BBMRI-ERIC is a European research infrastructure for biobanking. We bring together all the main players from the biobanking field – researchers, biobankers, industry, and patients – to boost biomedical research. To that end, we offer quality management services, support with ethical, legal and societal issues, and a number of online tools and software solutions. Ultimately, our goal is to make new treatments possible. The Directory is a tool to share aggregate information about the biobanks that are willing external collaboration. It is based on the MIABIS 2.0 standard, which describes the samples and data in the biobanks at an aggregated level.

EASY

DANS-EASY

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<<<!!!<<< Please note that EASY has been replaced by the DANS Data Stations. Data from EASY can be discovered and accessed through the Data Stations. https://dans.knaw.nl/nl/ >>>!!!>>>

HydroShare

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HydroShare is a system operated by The Consortium of Universities for the Advancement of Hydrologic Science Inc. (CUAHSI) that enables users to share and publish data and models in a variety of flexible formats, and to make this information available in a citable, shareable and discoverable manner. HydroShare includes a repository for data and models, and tools (web apps) that can act on content in HydroShare providing users with a gateway to high performance computing and computing in the cloud. With HydroShare you can: share data and models with colleagues; manage access to shared content; share, access, visualize, and manipulate a broad set of hydrologic data types and models; publish data and models and obtain a citable digital object identifier (DOI); aggregate resources into collections; discover and access data and models published by others; use the web services application programming interface (API) to programmatically access resources; and use integrated web applications to visualize, analyze and run models with data in HydroShare.

GLUES Geoportal

Global Assessment of Land Use Dynamics, Greenhouse Gas Emissions and Ecosystem Services : Geoportal

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<<<!!!<<< This repository is no longer maintained >>>!!!>>> This portal provides access to the GLUES Geodata Infrastructure (Glues GDI). The infrastructure is the common data and service platform for the international research program 'Sustainable Land Management'.

The Chromosome 7 Annotation Project

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

PRoteomics IDEntifications Database

PRIDE

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The PRIDE PRoteomics IDEntifications database is a centralized, standards compliant, public data repository for proteomics data, including protein and peptide identifications, post-translational modifications and supporting spectral evidence. PRIDE encourages and welcomes direct user submissions of mass spectrometry data to be published in peer-reviewed publications.

Finnish Social Science Data Archive

Yhteiskuntatieteellinen tietoarkisto

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The Finnish Social Science Data Archive (FSD) is a national resource centre for research and education. FSD's mission is to preserve data collected to study Finnish society, people and cultural phenomena in the long term. FSD archives, promotes and disseminates digital research data for research, teaching and learning purposes. Data descriptions are published in Finnish and English on FSD’s service portal Aila, through which users also download data. Quantitative datasets are translated from Finnish into English on request, and a large number of datasets are available in English. All services are free of charge. FSD promotes transparency, accumulation and efficient reuse of scientific research as well as open access to research data. FSD is the Finnish Service Provider for CESSDA ERIC.

SupraBank

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An open resource for intermolecular interactions

Fishbase

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Fishbase is a global species database and encyclopedia of over 30,000 species and subspecies of fishes that is searchable by common name, genus, species, geography, family, ecosystem, references literature, tools, etc. Links to other, related databases such as the Catalog of Fishes, GenBack, and LarvalBase. Associated with a partner journal, Acta Ichthyologica et Piscatoria. With mirror sites in English, German, French Spanish, Portuguese, French, Swedish, Chinese and Arabian language.

Global Terrestrial Network for Permafrost

GTN-P Database

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The GTN-P database is an object-related database open for a diverse range of data. Because of the complexity of the PAGE21 project, data provided in the GTN-P management system are extremely diverse, ranging from active-layer thickness measurements once per year to flux measurement every second and everthing else in between. The data can be assigned to two broad categories: Quantitative data which is all data that can be measured numerically. Quantitative data comprise all in situ measurements, i.e. permafrost temperatures and active layer thickness (mechanical probing, frost/thaw tubes, soil temperature profiles). Qualitative data (knowledge products) are observations not based on measurements, such as observations on soils, vegetation, relief, etc.