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Found 22 result(s)

NanoCommons Knowledge Base

NanoSolveIT Knowledge Base

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The NanoTox Knowlege Base provides access to Nanomaterials, their physico-chemical characterisations, toxicological assays and environmental data as well as computational model based descriptors.

OrthoMCL

Ortholog Groups of Protein Sequences

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OrthoMCL is a genome-scale algorithm for grouping orthologous protein sequences. It provides not only groups shared by two or more species/genomes, but also groups representing species-specific gene expansion families. So it serves as an important utility for automated eukaryotic genome annotation. OrthoMCL starts with reciprocal best hits within each genome as potential in-paralog/recent paralog pairs and reciprocal best hits across any two genomes as potential ortholog pairs. Related proteins are interlinked in a similarity graph. Then MCL (Markov Clustering algorithm,Van Dongen 2000; www.micans.org/mcl) is invoked to split mega-clusters. This process is analogous to the manual review in COG construction. MCL clustering is based on weights between each pair of proteins, so to correct for differences in evolutionary distance the weights are normalized before running MCL.

EBRAINS

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EBRAINS offers one of the most comprehensive platforms for sharing brain research data ranging in type as well as spatial and temporal scale. We provide the guidance and tools needed to overcome the hurdles associated with sharing data. The EBRAINS data curation service ensures that your dataset will be shared with maximum impact, visibility, reusability, and longevity, hhttps://www.ebrains.eu/data/find-data/. Find data - the user interface of the EBRAINS Knowledge Graph - allows you to easily find data of interest. EBRAINS hosts a wide range of data types and models from different species. All data are well described and can be accessed immediately for further analysis.

EUDAT

European Data Infrastructure

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The EUDAT project aims to contribute to the production of a Collaborative Data Infrastructure (CDI). The project´s target is to provide a pan-European solution to the challenge of data proliferation in Europe's scientific and research communities. The EUDAT vision is to support a Collaborative Data Infrastructure which will allow researchers to share data within and between communities and enable them to carry out their research effectively. EUDAT aims to provide a solution that will be affordable, trustworthy, robust, persistent and easy to use. EUDAT comprises 26 European partners, including data centres, technology providers, research communities and funding agencies from 13 countries. B2FIND is the EUDAT metadata service allowing users to discover what kind of data is stored through the B2SAFE and B2SHARE services which collect a large number of datasets from various disciplines. EUDAT will also harvest metadata from communities that have stable metadata providers to create a comprehensive joint catalogue to help researchers find interesting data objects and collections.

APIS

Portuguese Archive of Social Information

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The Portuguese Archive of Social Information (APIS) is a scientific infrastructure acting on the domain of preservation and dissemination of social science data. Based at Instituto de Ciências Sociais, University of Lisbon, the archive works towards the acquisition and sharing of digital data for the purposes of public consultation, secondary analysis and pedagogical use. The archive comprises a range of datasets provided by research projects of the national scientific community.

Research data repository of the Universität Innsbruck

UIBK Data Repository

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The institutional research data repository of the Universität Innsbruck is a service to enable storing, sharing and publishing of research data according to the FAIR principles for its employees and project partners.

Medical Imaging and Data Research Center

MIDRC

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MIDRC aims to develop a high-quality repository for medical images related to COVID-19 and associated clinical data, and develop and foster medical image-based artificial intelligence (AI) for use in the detection, diagnosis, prognosis, and monitoring of COVID-19.

B2SHARE

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B2SHARE is a user-friendly, reliable and trustworthy way for researchers, scientific communities and citizen scientists to store and share small-scale research data from diverse contexts and disciplines. B2SHARE is able to add value to your research data via (domain tailored) metadata, and assigning citable Persistent Identifiers PIDs (Handles) to ensure long-lasting access and references. B2SHARE is one of the B2 services developed via EUDAT and long tail data deposits do not cost money. Special arrangements such as branding and special metadata elements can be made on request.

ELI ERIC Open Data Repository

Extreme Light Infrastructure

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The Extreme Light Infrastructure (ELI) is the world's most advanced laser-based research infrastructure. The ELI Facilities provide access to a broad range of world-class high-power, high repetition-rate laser systems and secondary sources. This enables cutting-edge research and new regimes of high intensity physics in physical, chemical, medical, and materials sciences.

OpenTopography

A Portal to High-Resolution Topography Data and Tools

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OpenTopography facilitates community access to high-resolution, Earth science-oriented, topography data, and related tools and resources. The OpenTopography Facility is based at the San Diego Supercomputer Center at the University of California, San Diego and is operated in collaboration with colleagues in the School of Earth and Space Exploration at Arizona State University and Earthscope Consortium. Core operational support for OpenTopography comes from the National Science Foundation Earth Sciences.

ESS-DIVE

formerly: CDIAC

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The U.S. Department of Energy’s (DOE) Environmental Systems Science Data Infrastructure for a Virtual Ecosystem (ESS-DIVE) data archive serves Earth and environmental science data. ESS-DIVE is funded by the Data Management program within the Climate and Environmental Science Division under the DOE’s Office of Biological and Environmental Research program (BER), and is maintained by the Lawrence Berkeley National Laboratory. ESS-DIVE will archive and publicly share data obtained from observational, experimental, and modeling research that is funded by the DOE’s Office of Science under its Subsurface Biogeochemical Research (SBR) and Terrestrial Ecosystem Science (TES) programs within the Environmental Systems Science (ESS) activity. ESS-DIVE was launched in July 2017, and is designed to provide long-term stewardship and use of data from observational, experimental and modeling activities in the DOE in the Subsurface Biogeochemical Research (SBR) and Terrestrial Ecosystem Science (TES) Programs in the Environmental System Science (ESS) activity.

CryptoDB

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CryptoDB is an integrated genomic and functional genomic database for the parasite Cryptosporidium and other related genera. CryptoDB integrates whole genome sequence and annotation along with experimental data and environmental isolate sequences provided by community researchers. The database includes supplemental bioinformatics analyses and a web interface for data-mining.

CMO Editionen und Quellen-Katalog

Corpus Musicae Ottomanicae Editionen und Quellen-Katalog

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CMO is a long-term project for the critical edition of Near Eastern music manuscripts. The project focusing on manuscripts of Ottoman music written in Hampartsum and staff notations during the nineteenth century, is funded by the German Research Foundation (DFG). This platform provides access to the online versions of both music and text editions, as well as the source catalogue, which is a comprehensive database of printed, manuscript and online sources.

DATICE

Gagnaþjónusta félagsvísinda á Íslandi

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DATICE was established in late 2018 and is funded by the University of Iceland's (UI) School of Social Sciences, with a contribution from the university's Centennial Fund. DATICE is the appointed service provider for the Consortium of European Social Science Data Archives (CESSDA ERIC) in Iceland and is located within the UI Social Science Research Institute (SSRI). The main goal of the data service is to ensure open and free access to high quality research data for the research community as well as the general public.

Open Data Commons for Traumatic Brain Injury

ODC-TBI

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ODC-TBI is a community platform to Share Data, Publish Data with a DOI, and get Citations. Advancing Traumatic Brain Injury research through sharing of data from basic and clinical research.

B2FIND

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B2FIND is a discovery service based on metadata steadily harvested from research data collections from EUDAT data centres and other repositories. The service offers faceted browsing and it allows in particular to discover data that is stored through the B2SAFE and B2SHARE services. The B2FIND service includes metadata that is harvested from many different community repositories.

Nottingham Research Data Management Repository

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The online digital research data repository of multi-disciplinary research datasets produced at the University of Nottingham, hosted by Information Services and managed and curated by Libraries, Research & Learning Resources. University of Nottingham researchers who have produced research data associated with an existing or forthcoming publication, or which has potential use for other researchers, are invited to upload their dataset.

Archaeology Data Service

ADS

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The ADS is an accredited digital repository for heritage data that supports research, learning and teaching with freely available, high quality and dependable digital resources by preserving and disseminating digital data in the long term. The ADS also promotes good practice in the use of digital data, provides technical advice to the heritage community, and supports the deployment of digital technologies.

ImmPort

Immunology Database and Analysis Portal

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The Immunology Database and Analysis Portal (ImmPort) archives clinical study and trial data generated by NIAID/DAIT-funded investigators. Data types housed in ImmPort include subject assessments i.e., medical history, concomitant medications and adverse events as well as mechanistic assay data such as flow cytometry, ELISA, ELISPOT, etc. --- You won't need an ImmPort account to search for compelling studies, peruse study demographics, interventions and mechanistic assays. But why stop there? What you really want to do is download the study, look at each experiment in detail including individual ELISA results and flow cytometry files. Perhaps you want to take those flow cytometry files for a test drive using FLOCK in the ImmPort flow cytometry module. To download all that interesting data you will need to register for ImmPort access.

B2SAFE

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B2SAFE is a robust, safe and highly available service which allows community and departmental repositories to implement data management policies on their research data across multiple administrative domains in a trustworthy manner. A solution to: provide an abstraction layer which virtualizes large-scale data resources, guard against data loss in long-term archiving and preservation, optimize access for users from different regions, bring data closer to powerful computers for compute-intensive analysis

TUHH Open Research - Research Data TUHH

TORE - Research Data TUHH

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Research Data TUHH is the institutional repository for research data of Hamburg University of Technology (TUHH)

Fairdata IDA Research Data Storage Service

IDA Research Data Storage Service

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Fairdata IDA is a research data storage service that provides secure storage for research data. The Fairdata services are a group of nationally developed Finnish ICT services for managing research data, especially in the later phases of the research life cycle (sharing, publishing, and preserving). Development of research data management infrastructure has been identified as an important step in enabling implementation of the FAIR principles. The Fairdata services are funded by the Finnish Ministry of Education and Culture, and developed and maintained by CSC IT Center for Science. The services consist of the following service components: IDA – Research Data Storage; Etsin – Research Data Finder; Qvain – Research Dataset Metadata Tool; Metax – Metadata Warehouse; AVAA – Dynamic Data Publishing Platform and the Digital Preservation Service for Research Data (including management and packaging). The services also provide means for applying for and granting permits to use restricted access datasets. The service is offered free of charge for its users. The services are available to the research community in accordance with the applicable usage policy. Minedu offers access to research data storage service IDA to Finnish higher education institutions, state research institutes and projects funded by the Academy of Finland. Minedu may also grant separate access or storage capacity to the service. Finnish higher education institutions and research institutes may distribute IDA storage capacity to actors within the Finnish research system, within the limits of their usage shares. The service is intended for storing research data and materials related to it. The data stored in the service is available to all project users. The users mark their data to be persistently stored (“Frozen”) in the service. All project members may make the “Frozen” data and related metadata publicly accessible by using the other aforementioned Fairdata services. The data in the service is stored in Finland. IDA service stores the data stored by organisations projects continuously or until it’s transferred to digital preservation, provided that the Terms of Use are met. The owners of the data decide on the openness and usage policies for their own data. User organisations are offered support and guidance on using the service.