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Found 9 result(s)

BIH / Charité Virtual Research Environment

Berlin Institute of Health / Charité Virtual Research Environment

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The Virtual Research Environment (VRE) is an open-source data management platform that enables medical researchers to store, process and share data in compliance with the European Union (EU) General Data Protection Regulation (GDPR). The VRE addresses the present lack of digital research data infrastructures fulfilling the need for (a) data protection for sensitive data, (b) capability to process complex data such as radiologic imaging, (c) flexibility for creating own processing workflows, (d) access to high performance computing. The platform promotes FAIR data principles and reduces barriers to biomedical research and innovation. The VRE offers a web portal with graphical and command-line interfaces, segregated data zones and organizational measures for lawful data onboarding, isolated computing environments where large teams can collaboratively process sensitive data privately, analytics workbench tools for processing, analyzing, and visualizing large datasets, automated ingestion of hospital data sources, project-specific data warehouses for structured storage and retrieval, graph databases to capture and query ontology-based metadata, provenance tracking, version control, and support for automated data extraction and indexing. The VRE is based on a modular and extendable state-of-the art cloud computing framework, a RESTful API, open developer meetings, hackathons, and comprehensive documentation for users, developers, and administrators. The VRE with its concerted technical and organizational measures can be adopted by other research communities and thus facilitates the development of a co-evolving interoperable platform ecosystem with an active research community.

Fungal Genetics Stock Center

FGSC

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The Fungal Genetics Stock Center has preserved and distributed strains of genetically characterized fungi since 1960. The collection includes over 20,000 accessioned strains of classical and genetically engineered mutants of key model, human, and plant pathogenic fungi. These materials are distributed as living stocks to researchers around the world.

kilthub figshare

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Provided by the University Libraries, KiltHub is the comprehensive institutional repository and research collaboration platform for research data and scholarly outputs produced by members of Carnegie Mellon University and their collaborators. KiltHub collects, preserves, and provides stable, long-term global open access to a wide range of research data and scholarly outputs created by faculty, staff, and student members of Carnegie Mellon University in the course of their research and teaching.

GSA Data Repository

Geological Society of America Data Repository

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The GSA Data Repository is an open file in which authors of articles in our journals can place information that supplements and expands on their article. These supplements will not appear in print but may be obtained from GSA.

Melanoma Molecular Map Project

MMMP

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<<<!!!<<< This repository is no longer available. >>>!!!>>>

ChemSpider

Search and share chemistry

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ChemSpider is a free chemical structure database providing fast access to over 58 million structures, properties and associated information. By integrating and linking compounds from more than 400 data sources, ChemSpider enables researchers to discover the most comprehensive view of freely available chemical data from a single online search. It is owned by the Royal Society of Chemistry. ChemSpider builds on the collected sources by adding additional properties, related information and links back to original data sources. ChemSpider offers text and structure searching to find compounds of interest and provides unique services to improve this data by curation and annotation and to integrate it with users’ applications.

Knoema

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Knoema is a knowledge platform. The basic idea is to connect data with analytical and presentation tools. As a result, we end with one uniformed platform for users to access, present and share data-driven content. Within Knoema, we capture most aspects of a typical data use cycle: accessing data from multiple sources, bringing relevant indicators into a common space, visualizing figures, applying analytical functions, creating a set of dashboards, and presenting the outcome.

City of Vancouver Open Data Portal

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Provides free and open access to over 155 city datasets with new ones added regularly. Open data is anonymized (not personally identifiable), free, and available to everyone in one or more open and accessible formats.

U.S. GLOBal Ocean ECosystems Dynamics

U.S. Globec

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Global Ocean Ecosystem Dynamics (GLOBEC) is the International Geosphere-Biosphere Programme (IGBP) core project responsible for understanding how global change will affect the abundance, diversity and productivity of marine populations. The programme was initiated by SCOR and the IOC of UNESCO in 1991, to understand how global change will affect the abundance, diversity and productivity of marine populations comprising a major component of oceanic ecosystems. The aim of GLOBEC is to advance our understanding of the structure and functioning of the global ocean ecosystem, its major subsystems, and its response to physical forcing so that a capability can be developed to forecast the responses of the marine ecosystem to global change. U.S. GLOBEC Programm includes the Georges Bank / NW Atlantic Programm, the Northeast Pacific Programm and the Southern Ocean Program.