Repository details

MetaNetX

Name of repository
MetaNetX
Additional name(s)
  • MNXref
Repository URL
https://www.metanetx.org
Subject(s)
Description
The MNXref namespace (the database for MetaNetX) is a comprehensive resource for the reconciliation and integration of metabolic information across diverse biochemical databases. MNXref integrates biochemical data from a broad range of resources, including ChEBI, KEGG, Rhea, BiGG, The SEED, and the recently added VHM. Each source is parsed, standardized, and mapped to MetaNetX identifiers through a combination of automated pipelines and manual curation.
Contact(s)
  • support: help@metanetx.org
Content type(s)
Keyword(s)
Persistent identifier(s) of the repository
Repository type(s)
  • disciplinary
Mission statement for designated community
https://www.metanetx.org/mnxdoc/mnxref.html
Research data repository language(s)
  • English
Data and/or service provider
  • serviceProvider

Institutions (1)

Institution
Swiss Institute of Bioinformatics
Additional name(s)
  • SIB
Institution
Country
Switzerland
Type(s) of responsibility
  • general
Type of institution
non-profit

Policies (1)

Policy Name
Disclaimer

Database access

Type of access to research data repository
open

Database licenses (1)

Database License
CC

Data access (1)

Type of access to data
open

Data licenses (1)

DataLicense
CC

Data upload (1)

Type of data upload
closed
Persistent identifier system(s)
  • other
Versioning
no
Data citation guideline
https://www.metanetx.org/mnxdoc/cite.html
Enhanced Publication
no
Quality management
yes
qualityManagementMeasure(s)

Application programming interfaces (1)

Type
SPARQL
Url
https://rdf.metanetx.org/sparql/
documentation
https://rdf.metanetx.org/

Metadata standards (1)

Metadata standard
Repository-Developed Metadata Schemas

Remarks

Entry date
2025-12-05
Last update
2025-12-10
Back to search
Submit a change request
Get a badge