Repository details
The algebraic phylogenetics database
Name of repository
The algebraic phylogenetics database
Repository URL
Subject(s)
Description
This website presents an algebraic classification of small tree and network models in phylogenetics. It currently hosts data on twentysix trees, paired with five different model types. These are listed in the table on the landing page. Mathematical details can be found on individual subpages for each tree and model. Algebraic phylogenetics is a subfield of Algebraic Statistics, with MSC identifiers 62R01, 65H10, 92D15, 68W30, and 14Q30. The page Notions and notation gives a mathematical introduction to the topic.
The website is available under an MIT License https://github.com/chgoergen/algebraicphylogeneticsorg, the corresponding software package under the GNU public license https://github.com/bkholler/Oscar.jl
Contact(s)
- administrative: maintainers@algebraicphylogenetics.org
Keyword(s)
Repository type(s)
- disciplinary
Mission statement for designated community
Research data repository language(s)
- English
Data and/or service provider
- dataProvider
Institutions (2)
Additional name(s)
- Deutsche Forschungsgemeinschaft
- DFG
Country
Type(s) of responsibility
- funding
Type of institution
non-profit
Additional name(s)
- MPI für Mathematik in den Naturwissenschaften
Country
Type(s) of responsibility
- general
Type of institution
non-profit
Funding (1)
Funder name
Deutsche Forschungsgemeinschaft
CrossrefFunderID
501100001659
Grant
Projektnummer 460135501. NFDI 29/1
Database access
Type of access to research data repository
open
Data access (1)
Type of access to data
open
Data licenses (1)
DataLicense
Data upload (1)
Type of data upload
closed
Name of the repository software
- other
Versioning
yes
Data citation guideline
Remarks
Remarks
The software is available on GitHub: https://docs.oscar-system.org/dev/Experimental/AlgebraicStatistics/phylogenetics/
Entry date
2025-03-19
Last update
2025-04-10
Cite this re3data.org record:
re3data.org: The algebraic phylogenetics database; editing status 2025-04-10; re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R31NJNQI last accessed: 2025-07-06- Current projects
- EOSC FAIR-IMPACT
-
To the extent possible under law,
re3data.org
has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
-
Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-07-06
