Repository details
PSnpBind
Name of repository
PSnpBind
Repository URL
Subject(s)
Description
PSnpBind is a large database of protein–ligand complexes covering a wide range of binding pocket mutations and small molecules’ landscape. This database can be used as a source of data for different types of studies, for example, developing machine learning algorithms to predict protein–ligand affinity or mutation's effect on it which requires an extensive amount of data with a wide coverage of mutation types and small molecules. Also, studies of protein-ligand interactions and conformer orientation changes across different mutated versions of a protein can be established using data from PSnpBind.
Contact(s)
- a.ammar@maastrichtuniversity.nl
Persistent identifier(s) of the repository
- other:https://w3id.org/psnpbind
Repository size
1.1 GB
Repository type(s)
- disciplinary
Research data repository language(s)
- English
Data and/or service provider
- dataProvider
Institutions (1)
Additional name(s)
- Maastricht University, BiGCaT
Country
Type(s) of responsibility
- general
Type of institution
non-profit
Policies (1)
Policy Name
Database access
Type of access to research data repository
open
Database licenses (1)
Database License
Data access (1)
Type of access to data
open
Data licenses (1)
DataLicense
Data upload (1)
Type of data upload
closed
Persistent identifier system(s)
- other
Name of the repository software
- MySQL
Versioning
no
Data citation guideline
Enhanced Publication
no
Quality management
unknown
Application programming interfaces (1)
Remarks
Remarks
Download Dataset: https://zenodo.org/record/5112334; GitHub:https://github.com/BiGCAT-UM/psnpbind-webapp
Entry date
2022-08-25
Last update
2022-09-07
Cite this re3data.org record:
re3data.org: PSnpBind; editing status 2022-09-07; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJN9J last accessed: 2025-04-27- Current projects
- EOSC FAIR-IMPACT
-
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re3data.org
has waived all copyright and related or neighboring rights to
the database entries of re3data.org.
-
Except where otherwise noted, content on this site is licensed under a
Creative Commons Attribution 4.0 International License
.
- Cite this service: re3data.org - Registry of Research Data Repositories. https://doi.org/10.17616/R3D last accessed: 2025-04-27
