Repository details

Network Data Exchange

Name of repository
Network Data Exchange
Additional name(s)
  • NDEx
Repository URL
https://home.ndexbio.org/index/
Subject(s)
Description
The NDEx Project provides an open-source framework where scientists and organizations can share, store, manipulate, and publish biological network knowledge. The NDEx Project maintains a free, public website; alternatively, users can also decide to run their own copies of the NDEx Server software in cases where the stored networks must be kept in a highly secure environment (such as for HIPAA compliance) or where high application load is incompatible with a shared public resource.
Contact(s)
Keyword(s)
Persistent identifier(s) of the repository
Repository type(s)
  • disciplinary
Mission statement for designated community
https://home.ndexbio.org/about-ndex/
Research data repository language(s)
  • English
Data and/or service provider
  • dataProvider

Institutions (2)

Institution
NDEx Project
Country
International
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution
The Regents of the University of California, The Cytoscape Consortium
Institution
Country
International
Type(s) of responsibility
  • technical
Type of institution
non-profit

Policies (3)

Policy Name
Quick Start guide
Policy Name
Nature Scientific Data - Data Policies
Policy Name
Terms, License and Sources

Database access

Type of access to research data repository
open

Database licenses (1)

Database License
BSD

Data access (3)

Type of access to data
open
Type of access to data
restricted
Data access restriction type(s)
  • other
Type of access to data
closed

Data licenses (10)

DataLicense
BSD
DataLicense
CC
DataLicense
Apache License 2.0
DataLicense
BSD
DataLicense
other
DataLicense
other
DataLicense
other
DataLicense
other
DataLicense
other
DataLicense
other

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • registration

Data upload license (1)

Data upload license name
Publishing in NDEx
Persistent identifier system(s)
  • DOI
Name of the repository software
  • other
Versioning
yes
Data citation guideline
https://home.ndexbio.org/about-ndex/#cite_NDEx
Enhanced Publication
yes
Quality management
unknown

Application programming interfaces (1)

Type
REST
Url
https://home.ndexbio.org/using-the-ndex-server-api/

Remarks

Remarks
NDEx – The Network Data Exchange is covered by Clarivate Data Citation Index . NDEx is a Scientific Data - Nature Reommended Data Repository.
Entry date
2018-05-28
Last update
2024-04-08
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Cite this re3data.org record:

re3data.org: Network Data Exchange; editing status 2024-04-08; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R31NJMAA last accessed: 2025-04-25