Repository details

Sicas Medical Image Repository

Name of repository
Sicas Medical Image Repository
Additional name(s)
  • SMIR
  • formerly: Virtual Skeleton Database
Repository URL
https://www.smir.ch
Subject(s)
Description
The SICAS Medical Image Repository is a freely accessible repository containing medical research data including medical images, surface models, clinical data, genomics data and statistical shape models. The data can freely be organized and shared on SMIR and made publicly accessible with a DOI. Dedicated data sets are organized as collections of anatomical regions (e.g Cochlea). The data can be filtered using a modular search and accessed on the web or through the SMIR API.
Contact(s)
  • contact@smir.ch
Keyword(s)
Persistent identifier(s) of the repository
Repository size
community uploads and more than 100 high quality full-body CT-scans are available
Repository type(s)
  • disciplinary
Mission statement for designated community
https://docs.smir.ch/
Research data repository language(s)
  • English
Data and/or service provider
  • dataProvider

Institutions (3)

Institution
National Center Of Competence in Statistical Shape Modeling
Additional name(s)
  • NCSSM
Country
Switzerland
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution
SICAS
Additional name(s)
  • Swiss Institute for Computer Assisted Surgery
Country
Switzerland
Type(s) of responsibility
  • funding
  • general
  • technical
Type of institution
non-profit
Start date of responsibility
2013-01-01
Institution
University of Bern, Institute for Surgical Technology and Biomechanics
Additional name(s)
  • Institute for Surgical Technology and Biomechanics
  • ISTB
  • Universität Bern, Institut für chirurgische Technologien und Biomechanik
Country
Switzerland
Type(s) of responsibility
  • technical
  • general
Type of institution
non-profit
Start date of responsibility
2008-12-01
End date of responsibility
2012-12-31

Policies (1)

Policy Name
Terms and Conditons

Database access

Type of access to research data repository
open

Data access (2)

Type of access to data
restricted
Data access restriction type(s)
  • other
  • registration
Type of access to data
open
Data access restriction type(s)
  • registration

Data licenses (3)

DataLicense
CC
DataLicense
ODC
DataLicense
other

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • registration

Data upload license (2)

Data upload license name
Creative Commons
Data upload license name
Open Data Commons
Persistent identifier system(s)
  • DOI
Name of the repository software
  • other
Versioning
yes
Data citation guideline
https://www.smir.ch/Home/TermsAndConditions
Enhanced Publication
unknown
Quality management
yes

Application programming interfaces (1)

Type
REST
Url
https://www.smir.ch/api/help

Metadata standards (1)

Metadata standard
Dublin Core

Alerting services (2)

Type of alerting service
RSS
Type of alerting service
RSS

Remarks

Remarks
SMIR contains BRATS (Brain Tumor Segmentation)2012 ff, ISLES (Ischemic Ischemic Stroke Lesion Segmentation) 2015 ff and Shape (Statistical Shape Model Challenge) 2014.
Entry date
2015-03-19
Last update
2023-05-15
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Cite this re3data.org record:

re3data.org: Sicas Medical Image Repository; editing status 2023-05-15; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3HP8C last accessed: 2025-04-26