The SABIO-RK is a web-based application based on the SABIO relational database that contains information about biochemical reactions, their kinetic equations with their parameters, and the experimental conditions under which these parameters were measured. It aims to support modellers in the setting-up of models of biochemical networks, but it is also useful for experimentalists or researchers with interest in biochemical reactions and their kinetics. All the data are manually curated and annotated by biological experts, supported by automated consistency checks.
Data Export: Reactions with selected kinetic data can be exported in SBML (Systems Biology Markup Language) for exchange with other systems or programs, e.g. allowing its import into simulation and modelling programs supporting SBML like COPASI or CellDesigner. The data is described in SBML together with annotations of entities and expressions to other resources and biological ontologies. These annotations comply with the MIRIAM standard (Minimal Information Requested In the Annotation of biochemical Models). For better tracking the exported SBML also contains
SABIO-RK specific identifiers (e.g. for a reaction or a kinetic record) that are compliant with MIRIAM.