Repository details

PeptideAtlas

Name of repository
PeptideAtlas
Repository URL
http://www.peptideatlas.org/
Subject(s)
Description
The PeptideAtlas validates expressed proteins to provide eukaryotic genome data. Peptide Atlas provides data to advance biological discoveries in humans. The PeptideAtlas accepts proteomic data from high-throughput processes and encourages data submission.
Contact(s)
Keyword(s)
Persistent identifier(s) of the repository
Repository type(s)
  • disciplinary
Mission statement for designated community
http://www.peptideatlas.org/overview.php
Research data repository language(s)
  • English
Data and/or service provider
  • dataProvider

Institutions (6)

Institution
European Commission
Country
European Union
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
Institute for Systems Biology, Seattle Proteome Center
Additional name(s)
  • SPC
Country
United States
Type(s) of responsibility
  • general
Type of institution
non-profit
Institution
U.S. Department of Health and Human Services, National Institutes of Health, National Cancer Institute
Additional name(s)
  • NCI
Institution
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
U.S. Department of Health and Human Services, National Institutes of Health, National Human Genome Research Institute
Additional name(s)
  • NHGRI
Institution
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
U.S. Department of Health and Human Services, National Institutes of Health, National Institute of General Medical Sciences
Additional name(s)
  • NIGMS
Institution
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit
Institution
U.S. Department of Health and Human Services, National Institutes of Health, The National Heart, Lung, and Blood Institute
Additional name(s)
  • NHLBI
Institution
Country
United States
Type(s) of responsibility
  • funding
Type of institution
non-profit

Policies (1)

Policy Name
Submissions to PeptideAtlas

Database access

Type of access to research data repository
open

Data access (1)

Type of access to data
open

Data licenses (1)

DataLicense
Public Domain

Data upload (1)

Type of data upload
restricted
Data upload restriction type(s)
  • registration
Persistent identifier system(s)
  • none
Name of the repository software
  • unknown
Data citation guideline
http://www.peptideatlas.org/publications.php
Enhanced Publication
unknown
Quality management
unknown

Application programming interfaces (1)

Type
FTP
Url
ftp://ftp.peptideatlas.org/pub/PeptideAtlas/Repository/PAe000002/

Metadata standards (1)

Metadata standard
Repository-Developed Metadata Schemas

Remarks

Remarks
PeptideAtlas is covered by Thomson Reuters Data Citation Index. PeptideAtlas is a part of the ProteomeXchange Consortium. A FTP directory for each dataset is available.
Entry date
2014-08-15
Last update
2023-02-13
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Cite this re3data.org record:

re3data.org: PeptideAtlas; editing status 2023-02-13; re3data.org - Registry of Research Data Repositories. http://doi.org/10.17616/R3BK61 last accessed: 2025-04-25